See <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/631/changes>
Changes: [kono] GUI code will be called from EDT. [rozagh] fixes #787 The API's added to the core-task-api under the packages named similarly as each TaskFactory's implementation in core-task-impl. Some of the TF's constructors are changed because of the additional TunableSetter argument. Decisions need to be made reagrding the naming of API's and required implementation in the app-api/impl. [kono] fixes #808 GUI related method calls had been removed form tasks. ------------------------------------------ [...truncated 10325 lines...] Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/manual-layout-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/manual-layout-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (2 KB at 15.7 KB/sec) [INFO] [INFO] Remote OBR update disabled (enable with -DremoteOBR) [INFO] --- maven-bundle-plugin:2.3.4:deploy (default-deploy) @ manual-layout-impl --- [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/manual-layout-impl/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$manual-layout-impl/builds/2012-03-23_20-08-08/archive/org.cytoscape/manual-layout-impl/3.0.0-alpha8-SNAPSHOT/manual-layout-impl-3.0.0-alpha8-SNAPSHOT.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/manual-layout-impl/target/manual-layout-impl-3.0.0-alpha8-SNAPSHOT.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$manual-layout-impl/builds/2012-03-23_20-08-08/archive/org.cytoscape/manual-layout-impl/3.0.0-alpha8-20120324.012044-705/manual-layout-impl-3.0.0-alpha8-20120324.012044-705.jar [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/manual-layout-impl/target/manual-layout-impl-3.0.0-alpha8-SNAPSHOT-sources.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$manual-layout-impl/builds/2012-03-23_20-08-08/archive/org.cytoscape/manual-layout-impl/3.0.0-alpha8-20120324.012044-705/manual-layout-impl-3.0.0-alpha8-20120324.012044-705-sources.jar [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building NetworkAnalyzer 3.0.0-alpha8-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ network-analyzer-impl --- [INFO] Copying 35 resources [INFO] [INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ network-analyzer-impl --- [INFO] Compiling 134 source files to <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-analyzer-impl/target/classes> [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] skip non existing resourceDirectory <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-analyzer-impl/src/test/resources> [INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ network-analyzer-impl --- [INFO] [INFO] --- maven-compiler-plugin:2.3.2:testCompile (default-testCompile) @ network-analyzer-impl --- [INFO] No sources to compile [INFO] [INFO] --- maven-surefire-plugin:2.7.1:test (default-test) @ network-analyzer-impl --- [INFO] No tests to run. [INFO] Surefire report directory: <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-analyzer-impl/target/surefire-reports> ------------------------------------------------------- T E S T S ------------------------------------------------------- There are no tests to run. Results : Tests run: 0, Failures: 0, Errors: 0, Skipped: 0 [JENKINS] Recording test results [INFO] [INFO] --- maven-bundle-plugin:2.3.4:bundle (default-bundle) @ network-analyzer-impl --- ignoring exception during new ExecutedMojo null [INFO] [INFO] --- maven-source-plugin:2.1.2:jar (attach-sources) @ network-analyzer-impl --- [INFO] de already added, skipping [INFO] de/mpg already added, skipping [INFO] de/mpg/mpi_inf already added, skipping [INFO] de/mpg/mpi_inf/bioinf already added, skipping [INFO] de/mpg/mpi_inf/bioinf/netanalyzer already added, skipping [INFO] de/mpg/mpi_inf/bioinf/netanalyzer/data already added, skipping [INFO] Building jar: <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-analyzer-impl/target/network-analyzer-impl-3.0.0-alpha8-SNAPSHOT-sources.jar> [INFO] de already added, skipping [INFO] de/mpg already added, skipping [INFO] de/mpg/mpi_inf already added, skipping [INFO] de/mpg/mpi_inf/bioinf already added, skipping [INFO] de/mpg/mpi_inf/bioinf/netanalyzer already added, skipping [INFO] de/mpg/mpi_inf/bioinf/netanalyzer/data already added, skipping [INFO] [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-analyzer-impl/target/network-analyzer-impl-3.0.0-alpha8-SNAPSHOT.jar> to /opt/tomcat-home/.m2/repository/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/network-analyzer-impl-3.0.0-alpha8-SNAPSHOT.jar [INFO] --- maven-install-plugin:2.3.1:install (default-install) @ network-analyzer-impl --- [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-analyzer-impl/pom.xml> to /opt/tomcat-home/.m2/repository/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/network-analyzer-impl-3.0.0-alpha8-SNAPSHOT.pom [INFO] Installing <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-analyzer-impl/target/network-analyzer-impl-3.0.0-alpha8-SNAPSHOT-sources.jar> to /opt/tomcat-home/.m2/repository/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/network-analyzer-impl-3.0.0-alpha8-SNAPSHOT-sources.jar [INFO] [INFO] --- maven-bundle-plugin:2.3.4:install (default-install) @ network-analyzer-impl --- [INFO] Installing org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/network-analyzer-impl-3.0.0-alpha8-SNAPSHOT.jar [INFO] Writing OBR metadata [INFO] Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml [INFO] --- maven-deploy-plugin:2.7:deploy (default-deploy) @ network-analyzer-impl --- Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (2 KB at 8.1 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/network-analyzer-impl-3.0.0-alpha8-20120324.012058-705.jar Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/network-analyzer-impl-3.0.0-alpha8-20120324.012058-705.jar (485 KB at 4662.5 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/network-analyzer-impl-3.0.0-alpha8-20120324.012058-705.pom Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/network-analyzer-impl-3.0.0-alpha8-20120324.012058-705.pom (5 KB at 34.6 KB/sec) Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/maven-metadata.xml Downloaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/maven-metadata.xml (527 B at 6.2 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (2 KB at 12.6 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/maven-metadata.xml (527 B at 9.7 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/network-analyzer-impl-3.0.0-alpha8-20120324.012058-705-sources.jar Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/network-analyzer-impl-3.0.0-alpha8-20120324.012058-705-sources.jar (480 KB at 4280.3 KB/sec) Uploading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml Uploaded: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/maven-metadata.xml (2 KB at 15.3 KB/sec) [INFO] Remote OBR update disabled (enable with -DremoteOBR) [INFO] [INFO] --- maven-bundle-plugin:2.3.4:deploy (default-deploy) @ network-analyzer-impl --- [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-analyzer-impl/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$network-analyzer-impl/builds/2012-03-23_20-08-08/archive/org.cytoscape/network-analyzer-impl/3.0.0-alpha8-SNAPSHOT/network-analyzer-impl-3.0.0-alpha8-SNAPSHOT.pom [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-analyzer-impl/target/network-analyzer-impl-3.0.0-alpha8-SNAPSHOT.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$network-analyzer-impl/builds/2012-03-23_20-08-08/archive/org.cytoscape/network-analyzer-impl/3.0.0-alpha8-20120324.012058-705/network-analyzer-impl-3.0.0-alpha8-20120324.012058-705.jar [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-analyzer-impl/target/network-analyzer-impl-3.0.0-alpha8-SNAPSHOT-sources.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$network-analyzer-impl/builds/2012-03-23_20-08-08/archive/org.cytoscape/network-analyzer-impl/3.0.0-alpha8-20120324.012058-705/network-analyzer-impl-3.0.0-alpha8-20120324.012058-705-sources.jar [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building CyMerge 3.0.0-alpha8-SNAPSHOT [INFO] ------------------------------------------------------------------------ [INFO] [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ network-merge-impl --- [INFO] Copying 12 resources [INFO] [INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ network-merge-impl --- [INFO] Compiling 31 source files to <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-merge-impl/target/classes> [INFO] ------------------------------------------------------------- [ERROR] COMPILATION ERROR : [INFO] ------------------------------------------------------------- [ERROR] <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-merge-impl/src/main/java/org/cytoscape/network/merge/internal/task/NetworkMergeTask.java>:[178,47] cannot find symbol symbol : method createView(org.cytoscape.model.CyNetwork) location: interface org.cytoscape.task.creation.NetworkViewCreator [INFO] 1 error [INFO] ------------------------------------------------------------- [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-merge-impl/pom.xml> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$network-merge-impl/builds/2012-03-23_20-08-08/archive/org.cytoscape/network-merge-impl/3.0.0-alpha8-SNAPSHOT/network-merge-impl-3.0.0-alpha8-SNAPSHOT.pom [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary: [INFO] [INFO] Cytoscape Implementation Parent Project POM ....... SUCCESS [4.273s] [INFO] org.cytoscape.biopax-impl [org.cytoscape.biopax] .. SUCCESS [8.443s] [INFO] Command Executor .................................. SUCCESS [5.814s] [INFO] org.cytoscape.equations-impl ...................... SUCCESS [9.012s] [INFO] model-impl-parent ................................. SUCCESS [1.608s] [INFO] org.cytoscape.model-impl .......................... SUCCESS [15.093s] [INFO] viewmodel-impl-parent ............................. SUCCESS [0.288s] [INFO] org.cytoscape.viewmodel-impl ...................... SUCCESS [4.329s] [INFO] Ding Implementation Parent Pom .................... SUCCESS [0.341s] [INFO] org.cytoscape.util-intr ........................... SUCCESS [4.824s] [INFO] org.cytoscape.spacial ............................. SUCCESS [7.831s] [INFO] org.cytoscape.graph-render ........................ SUCCESS [5:28.851s] [INFO] org.cytoscape.ding-presentation-impl .............. SUCCESS [17.819s] [INFO] org.cytoscape.core-task-impl ...................... SUCCESS [32.405s] [INFO] org.cytoscape.cpath2-impl [org.cytoscape.cpath2] .. SUCCESS [20.626s] [INFO] org.cytoscape.ding-customgraphics-manager-impl .... SUCCESS [7.336s] [INFO] org.cytoscape.group-impl [org.cytoscape.group.internal] SUCCESS [9.030s] [INFO] io-impl-parent .................................... SUCCESS [0.549s] [INFO] org.cytoscape.io-impl [org.cytoscape.io.internal] . SUCCESS [34.458s] [INFO] event-impl-parent ................................. SUCCESS [0.628s] [INFO] org.cytoscape.event-impl .......................... SUCCESS [15.046s] [INFO] org.cytoscape.layout-impl ......................... SUCCESS [5.756s] [INFO] org.cytoscape.ding-impl-performance-debug ......... SUCCESS [37.815s] [INFO] org.cytoscape.editor-impl ......................... SUCCESS [7.870s] [INFO] org.cytoscape.equations-functions-impl ............ SUCCESS [8.707s] [INFO] org.cytoscape.event-impl-it ....................... SUCCESS [11.818s] [INFO] org.cytoscape.filter-impl [org.cytoscape.filter.internal] SUCCESS [13.507s] [INFO] GraphML Reader and Writer for Cytoscape 3 ......... SUCCESS [11.188s] [INFO] org.cytoscape.group-data-impl [org.cytoscape.group.data.internal] SUCCESS [5.775s] [INFO] org.cytoscape.group-view-impl [org.cytoscape.group.view.internal] SUCCESS [6.443s] [INFO] org.cytoscape.io-impl-performance ................. SUCCESS [34.004s] [INFO] org.cytoscape.layout-cytoscape-impl [csapps.layout] SUCCESS [9.210s] [INFO] org.cytoscape.layout-jgraph-impl [csapps.layout] .. SUCCESS [6.901s] [INFO] org.cytoscape.layout-prefuse-impl [org.cytoscape.prefuse.layouts.internal] SUCCESS [7.944s] [INFO] org.cytoscape.linkout-impl [org.cytoscape.linkout.internal] SUCCESS [8.299s] [INFO] org.cytoscape.log-swing-impl [org.cytoscape.log.internal] SUCCESS [12.481s] [INFO] Manual Layout ..................................... SUCCESS [8.466s] [INFO] NetworkAnalyzer ................................... SUCCESS [13.794s] [INFO] CyMerge ........................................... FAILURE [2.756s] [INFO] org.cytoscape.app-impl ............................ SKIPPED [INFO] org.cytoscape.presentation-impl [org.cytoscape.view.presentation.internal] SKIPPED [INFO] org.cytoscape.property.internal ................... SKIPPED [INFO] psi-mi-impl-parent ................................ SKIPPED [INFO] org.cytoscape.psi-mi-impl [org.cytoscape.psi_mi.internal] SKIPPED [INFO] org.cytoscape.psi-mi-impl-performance ............. SKIPPED [INFO] org.cytoscape.sbml-impl [org.cytoscape.sbml.internal] SKIPPED [INFO] org.cytoscape.search-impl [org.cytoscape.search.internal] SKIPPED [INFO] org.cytoscape.session-impl ........................ SKIPPED [INFO] Cytoscape Swing Application Impl .................. SKIPPED [INFO] Cytoscape Table Browser Implementation ............ SKIPPED [INFO] org.cytoscape.table-import-impl [org.cytoscape.tableimport.internal] SKIPPED [INFO] org.cytoscape.vizmap-gui-impl ..................... SKIPPED [INFO] vizmap-impl-parent ................................ SKIPPED [INFO] org.cytoscape.view.vizmap-impl .................... SKIPPED [INFO] org.cytoscape.io.webservice-biomart-client-impl [org.cytoscape.io.webservice.biomart] SKIPPED [INFO] org.cytoscape.webservice-impl [org.cytoscape.webservice.internal] SKIPPED [INFO] org.cytoscape.webservice-ncbi-client-impl [org.cytoscape.webservice.ncbi] SKIPPED [INFO] work-swing-impl-parent ............................ SKIPPED [INFO] org.cytoscape.work-swing-impl ..................... SKIPPED [INFO] org.cytoscape.application-impl .................... SKIPPED [INFO] org.cytoscape.webservice-psicquic-client-impl [org.cytoscape.webservice.psicquic] SKIPPED [INFO] datasource-impl ................................... SKIPPED [INFO] datasource-biogrid-impl ........................... SKIPPED [INFO] org.cytoscape.welcome-impl [org.cytoscape.welcome.internal] SKIPPED [INFO] org.cytoscape.gui-cmdline-parser-impl [org.cytoscape.cmdline.gui.internal] SKIPPED [INFO] org.cytoscape.scripting-impl [org.cytoscape.scripting.internal] SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 12:48.843s [INFO] Finished at: Fri Mar 23 20:21:02 GMT-05:00 2012 [INFO] Final Memory: 88M/209M [INFO] ------------------------------------------------------------------------ mavenExecutionResult exceptions not empty message : Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.3.2:compile (default-compile) on project network-merge-impl: Compilation failure <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-merge-impl/src/main/java/org/cytoscape/network/merge/internal/task/NetworkMergeTask.java>:[178,47] cannot find symbol symbol : method createView(org.cytoscape.model.CyNetwork) location: interface org.cytoscape.task.creation.NetworkViewCreator cause : Compilation failure <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-merge-impl/src/main/java/org/cytoscape/network/merge/internal/task/NetworkMergeTask.java>:[178,47] cannot find symbol symbol : method createView(org.cytoscape.model.CyNetwork) location: interface org.cytoscape.task.creation.NetworkViewCreator Stack trace : org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.3.2:compile (default-compile) on project network-merge-impl: Compilation failure <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-merge-impl/src/main/java/org/cytoscape/network/merge/internal/task/NetworkMergeTask.java>:[178,47] cannot find symbol symbol : method createView(org.cytoscape.model.CyNetwork) location: interface org.cytoscape.task.creation.NetworkViewCreator at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:213) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59) at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:616) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158) at hudson.maven.Maven3Builder.call(Maven3Builder.java:112) at hudson.maven.Maven3Builder.call(Maven3Builder.java:70) at hudson.remoting.UserRequest.perform(UserRequest.java:118) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:287) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334) at java.util.concurrent.FutureTask.run(FutureTask.java:166) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) at java.lang.Thread.run(Thread.java:636) Caused by: org.apache.maven.plugin.CompilationFailureException: Compilation failure <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/network-merge-impl/src/main/java/org/cytoscape/network/merge/internal/task/NetworkMergeTask.java>:[178,47] cannot find symbol symbol : method createView(org.cytoscape.model.CyNetwork) location: interface org.cytoscape.task.creation.NetworkViewCreator at org.apache.maven.plugin.AbstractCompilerMojo.execute(AbstractCompilerMojo.java:656) at org.apache.maven.plugin.CompilerMojo.execute(CompilerMojo.java:128) at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209) ... 27 more Sending e-mails to: [email protected] Sending e-mails to: [email protected] channel stopped -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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