Author: mes
Date: 2012-05-04 14:18:45 -0700 (Fri, 04 May 2012)
New Revision: 29120

Added:
   new_cytoscape_website/trunk/deploy-test.sh
   new_cytoscape_website/trunk/release_notes_2_8_3.html
Modified:
   new_cytoscape_website/trunk/deploy.sh
   new_cytoscape_website/trunk/download_config.php
   new_cytoscape_website/trunk/index.html
   new_cytoscape_website/trunk/js/global_variables.js
Log:
updated for release 2.8.3

Added: new_cytoscape_website/trunk/deploy-test.sh
===================================================================
--- new_cytoscape_website/trunk/deploy-test.sh                          (rev 0)
+++ new_cytoscape_website/trunk/deploy-test.sh  2012-05-04 21:18:45 UTC (rev 
29120)
@@ -0,0 +1,8 @@
+# Syncs latest file changes to cytoscape.org
+# - excludes all svn directories
+
+# Collect user name
+
+#  Issue rsync command
+rsync -c -av --delete --exclude ".svn/" --exclude "deploy.sh" --exclude 
"deploy-test.sh" . [email protected]:/var/www/html/cytoscape_test_website/
+


Property changes on: new_cytoscape_website/trunk/deploy-test.sh
___________________________________________________________________
Added: svn:executable
   + *

Modified: new_cytoscape_website/trunk/deploy.sh
===================================================================
--- new_cytoscape_website/trunk/deploy.sh       2012-05-04 21:03:18 UTC (rev 
29119)
+++ new_cytoscape_website/trunk/deploy.sh       2012-05-04 21:18:45 UTC (rev 
29120)
@@ -13,5 +13,5 @@
 read name
 
 #  Issue rsync command
-rsync -c -av --delete --exclude ".svn/" --exclude "deploy.sh" . 
$name,[email protected]:htdocs/
+rsync -c -av --delete --exclude ".svn/" --exclude "deploy.sh" --exclude 
"deploy-test.sh" . $name,[email protected]:htdocs/
 

Modified: new_cytoscape_website/trunk/download_config.php
===================================================================
--- new_cytoscape_website/trunk/download_config.php     2012-05-04 21:03:18 UTC 
(rev 29119)
+++ new_cytoscape_website/trunk/download_config.php     2012-05-04 21:18:45 UTC 
(rev 29120)
@@ -1,5 +1,29 @@
 <?php
 
+##!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
+##
+##
+##
+##
+##
+##
+##
+##
+##
+##  WARNING !!!!!!!!!!!!!!!!!!!!!!!
+##
+##
+##  You must also update the file js/global_variables.js with new version 
numbers!!!!!!
+##
+##
+##
+##
+##
+##
+##
+##
+##!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
+
 # Base URLs
 $cbio_base = "http://www.cbio.mskcc.org/cytoscape/release/";;
 $chianti_base = "http://chianti.ucsd.edu/";;
@@ -8,8 +32,8 @@
 $download_log = "/home/groups/c/cy/cytoscape/persistent/data/cyto_data.txt";
 
 #
-$latest_version = "2.8.2";
-$latest_version_underscore = "2_8_2";
+$latest_version = "2.8.3";
+$latest_version_underscore = "2_8_3";
 $latest_version_doc_prefix = "2_8";
 
 # Beta and Development versions.  Use empty string when beta is not available.
@@ -34,7 +58,8 @@
        "2.6.3" => "http://chianti.ucsd.edu/Cyto-2_6_3/";,
        "2.7.0" => "http://chianti.ucsd.edu/Cyto-2_7_0/";,
        "2.8.0" => "http://chianti.ucsd.edu/Cyto-2_8_0/";,
-       "2.8.1" => "http://chianti.ucsd.edu/Cyto-2_8_1/";
+       "2.8.1" => "http://chianti.ucsd.edu/Cyto-2_8_1/";,
+       "2.8.2" => "http://chianti.ucsd.edu/Cyto-2_8_2/";
 );
 
 $latest_version_url = $chianti_base."Cyto-".$latest_version_underscore."/";

Modified: new_cytoscape_website/trunk/index.html
===================================================================
--- new_cytoscape_website/trunk/index.html      2012-05-04 21:03:18 UTC (rev 
29119)
+++ new_cytoscape_website/trunk/index.html      2012-05-04 21:18:45 UTC (rev 
29120)
@@ -69,10 +69,10 @@
       
       <div id="slides" class="galleryview">
        
-        <div class="panel"> <a name="desc-00" title="Cytoscape 2.8.2" 
href="images/top_slides/cytoscapeDesktop1.png"> <img 
src="images/top_slides/cytoscapeDesktop1_700px.png" /> </a>
+        <div class="panel"> <a name="desc-00" title="Cytoscape New Features" 
href="images/top_slides/cytoscapeDesktop1.png"> <img 
src="images/top_slides/cytoscapeDesktop1_700px.png" /> </a>
           <div class="panel-overlay">
-            <h2>Cytoscape 2.8.2</h2>
-            <div id="desc-00">Cytoscape 2.8.2 supports custom graphics, 
functions, and commands.</div>
+            <h2>Cytoscape New Features</h2>
+            <div id="desc-00">Cytoscape supports custom graphics, functions, 
and commands.</div>
           </div>
         </div>
         

Modified: new_cytoscape_website/trunk/js/global_variables.js
===================================================================
--- new_cytoscape_website/trunk/js/global_variables.js  2012-05-04 21:03:18 UTC 
(rev 29119)
+++ new_cytoscape_website/trunk/js/global_variables.js  2012-05-04 21:18:45 UTC 
(rev 29120)
@@ -1,6 +1,6 @@
 // Modify this number when you release newer version.
-var latestVersion ="2.8.2";
-var latestVersion_underscore = "2_8_2";
+var latestVersion ="2.8.3";
+var latestVersion_underscore = "2_8_3";
 var latestVersion_prefix = "2_8";
 
 //root URL

Added: new_cytoscape_website/trunk/release_notes_2_8_3.html
===================================================================
--- new_cytoscape_website/trunk/release_notes_2_8_3.html                        
        (rev 0)
+++ new_cytoscape_website/trunk/release_notes_2_8_3.html        2012-05-04 
21:18:45 UTC (rev 29120)
@@ -0,0 +1,34 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" 
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd";>
+<html xmlns="http://www.w3.org/1999/xhtml";>
+<head>
+<meta http-equiv="Content-Type" content="text/html; charset=UTF-8" />
+<link href="css/main.css" type="text/css" rel="stylesheet"
+       media="screen">
+<title>Cytoscape Release Notes</title>
+<script type="text/javascript"
+       
src="http://ajax.googleapis.com/ajax/libs/jquery/1.4.2/jquery.min.js";></script>
+<script type="text/javascript"
+       
src="http://ajax.googleapis.com/ajax/libs/jqueryui/1.8.1/jquery-ui.min.js";></script>
+
+<script type="text/javascript" src="js/global_variables.js"></script>
+<script type="text/javascript" src="js/menu_generator.js"></script>
+</head>
+
+<body>
+<div id="container"><script src="js/header.js"></script>
+<div id="documents">
+
+<p>
+<h1>Updates in Cytoscape 2.8.3</h1>
+</p>
+<p>This release contains a few bug fixes as a well as a few minor enhancements.
+<h3>VizMapper fixes</h3>
+<p>We fixed a few problems with the VizMapper that were disappearing visual 
properties and otherwise making the VizMapper difficult to use.
+<h3>Better support for Macs without a 3-button mouse</h3>
+<p>You can now CMD-click to simulate right clicking on Mac laptops, which 
allows easier panning of networks.  We've also enabled the arrow keys (and 
shift-arrow) to allow panning.
+<h3>Reorganized plugin categories</h3>
+<p>We've reorganized plugin categories.  You should see the new categories in 
the plugin manager and on the plugin website. This is just a prelude of 
exciting changes to come! 
+</div>
+<script src="js/footer.js"></script></div>
+</body>
+</html>

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