Author: clopes
Date: 2012-05-18 10:27:19 -0700 (Fri, 18 May 2012)
New Revision: 29297
Modified:
core3/api/trunk/session-api/src/main/java/org/cytoscape/session/events/SessionAboutToBeSavedEvent.java
core3/impl/trunk/application-impl/src/main/java/org/cytoscape/application/internal/CyApplicationManagerImpl.java
core3/impl/trunk/session-impl/impl/src/main/java/org/cytoscape/session/internal/CySessionManagerImpl.java
core3/impl/trunk/session-impl/integration-test/
core3/impl/trunk/swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkPanel.java
core3/impl/trunk/swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkTreeTableModel.java
core3/impl/trunk/swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkViewManager.java
core3/samples/trunk/sample28/feature/
Log:
Fixes #1013 : The target of Network tab's context menu is
confusing--Right-clicking a list item that is not selected deselects all items
and selects the right-clicked one only.
CyApplicationManagerImpl now fires a SetCurrentNetworkEvent if changing the
current view also changes the current network.
Other minor improvements.
Modified:
core3/api/trunk/session-api/src/main/java/org/cytoscape/session/events/SessionAboutToBeSavedEvent.java
===================================================================
---
core3/api/trunk/session-api/src/main/java/org/cytoscape/session/events/SessionAboutToBeSavedEvent.java
2012-05-18 16:51:14 UTC (rev 29296)
+++
core3/api/trunk/session-api/src/main/java/org/cytoscape/session/events/SessionAboutToBeSavedEvent.java
2012-05-18 17:27:19 UTC (rev 29297)
@@ -22,7 +22,6 @@
private final Map<String,List<File>> appFileListMap;
- // TODO should the source be the session manager??
/**
* Constructor.
* @param source The {@link CySessionManager} that will be saving the
session.
Modified:
core3/impl/trunk/application-impl/src/main/java/org/cytoscape/application/internal/CyApplicationManagerImpl.java
===================================================================
---
core3/impl/trunk/application-impl/src/main/java/org/cytoscape/application/internal/CyApplicationManagerImpl.java
2012-05-18 16:51:14 UTC (rev 29296)
+++
core3/impl/trunk/application-impl/src/main/java/org/cytoscape/application/internal/CyApplicationManagerImpl.java
2012-05-18 17:27:19 UTC (rev 29297)
@@ -72,7 +72,9 @@
NetworkViewAboutToBeDestroyedListener,
NetworkAddedListener,
NetworkViewAddedListener {
+
private static final Logger logger =
LoggerFactory.getLogger(CyApplicationManagerImpl.class);
+
private final CyEventHelper cyEventHelper;
private final CyNetworkManager networkManager;
private final CyNetworkViewManager networkViewManager;
@@ -92,21 +94,18 @@
this.networkViewManager = networkViewManager;
selectedNetworkViews = new LinkedList<CyNetworkView>();
- currentNetwork = null;
- currentNetworkView = null;
- this.currentRenderer = null;
}
@Override
public void handleEvent(final NetworkViewAddedEvent event) {
- if (!event.getNetworkView().equals( currentNetworkView ))
- setCurrentNetworkView( event.getNetworkView() );
+ if (!event.getNetworkView().equals(currentNetworkView))
+ setCurrentNetworkView(event.getNetworkView());
}
@Override
public void handleEvent(final NetworkAddedEvent event) {
- if (!event.getNetwork().equals( currentNetwork ))
- setCurrentNetwork( event.getNetwork() );
+ if (!event.getNetwork().equals(currentNetwork))
+ setCurrentNetwork(event.getNetwork());
}
@Override
@@ -151,15 +150,23 @@
logger.info("Set current network called: " + network);
changed = (network == null && currentNetwork != null)
|| (network != null && !network.equals(currentNetwork));
- currentNetwork = network;
-
- if (network != null) {
- final Collection<CyNetworkView> views =
networkViewManager.getNetworkViews(network);
- currentNetworkView = views.isEmpty() ? null :
views.iterator().next();
- // reset selected networks
- selectNetworks(Arrays.asList(new CyNetwork[]{
network }));
- } else {
- currentNetworkView = null;
+ if (changed) {
+ currentNetwork = network;
+
+ if (network != null) {
+ // set new current network view?
+ final Collection<CyNetworkView> views =
networkViewManager.getNetworkViews(network);
+ final CyNetworkView nv =
views.isEmpty() ? null : views.iterator().next();
+
+ if (nv != currentNetworkView)
+ setCurrentNetworkView(nv);
+
+ // reset selected networks
+ selectNetworks(Arrays.asList(new
CyNetwork[]{ network }));
+ } else {
+ if (currentNetworkView != null)
+ setCurrentNetworkView(null);
+ }
}
}
@@ -185,14 +192,18 @@
logger.debug("Set current network view called: " +
view);
changed = (view == null && currentNetworkView != null)
|| (view != null && !view.equals(currentNetworkView));
- currentNetworkView = view;
- // reset selected network views
- selectedNetworkViews.clear();
-
- if (view != null) {
- selectedNetworkViews.add(currentNetworkView);
- setCurrentNetwork(view.getModel());
+ if (changed) {
+ currentNetworkView = view;
+ // reset selected network views
+ selectedNetworkViews.clear();
+
+ if (view != null) {
+ selectedNetworkViews.add(view);
+
+ if
(!view.getModel().equals(currentNetwork))
+
setCurrentNetwork(view.getModel());
+ }
}
}
Modified:
core3/impl/trunk/session-impl/impl/src/main/java/org/cytoscape/session/internal/CySessionManagerImpl.java
===================================================================
---
core3/impl/trunk/session-impl/impl/src/main/java/org/cytoscape/session/internal/CySessionManagerImpl.java
2012-05-18 16:51:14 UTC (rev 29296)
+++
core3/impl/trunk/session-impl/impl/src/main/java/org/cytoscape/session/internal/CySessionManagerImpl.java
2012-05-18 17:27:19 UTC (rev 29297)
@@ -36,6 +36,7 @@
import java.io.File;
import java.util.ArrayList;
+import java.util.Collection;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
@@ -239,7 +240,7 @@
@Override
public void setCurrentSession(CySession sess, final String fileName) {
boolean emptySession = sess == null;
-
+
// Always remove the current session first
disposeCurrentSession(!emptySession);
@@ -403,18 +404,31 @@
private void restoreNetworkSelection(final CySession sess, final
List<CyNetwork> selectedNets) {
// If the current view/network was not set, set the first
selected network as current
if (!selectedNets.isEmpty()) {
- appMgr.setCurrentNetwork(selectedNets.get(0));
- } else {
- final Set<CyNetwork> allNets = sess.getNetworks();
+ final CyNetwork cn = selectedNets.get(0);
+ appMgr.setCurrentNetwork(cn);
- if (!allNets.isEmpty())
-
appMgr.setCurrentNetwork(allNets.iterator().next());
- }
+ // Also set the current view, if there is one
+ final Collection<CyNetworkView> cnViews =
nvMgr.getNetworkViews(cn);
+ CyNetworkView cv = cnViews.isEmpty() ? null :
cnViews.iterator().next();
+ if (cv == null) {
+ // The current network has no view, so try to
get the next existing view of the network selection
+ for (final CyNetwork n : selectedNets) {
+ final Collection<CyNetworkView> views =
nvMgr.getNetworkViews(n);
+
+ if (!views.isEmpty()) {
+ cv = views.iterator().next();
+ break;
+ }
+ }
+ }
+
+ appMgr.setCurrentNetworkView(cv);
- // The selected networks must be set after setting the current
one!
- if (!selectedNets.isEmpty())
- appMgr.setSelectedNetworks(selectedNets);
+ // The selected networks must be set after setting the
current one!
+ if (!selectedNets.isEmpty())
+ appMgr.setSelectedNetworks(selectedNets);
+ }
}
private void disposeCurrentSession(boolean removeVisualStyles) {
Property changes on: core3/impl/trunk/session-impl/integration-test
___________________________________________________________________
Modified: svn:ignore
- target
+ target
.settings
.classpath
.project
Modified:
core3/impl/trunk/swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkPanel.java
===================================================================
---
core3/impl/trunk/swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkPanel.java
2012-05-18 16:51:14 UTC (rev 29296)
+++
core3/impl/trunk/swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkPanel.java
2012-05-18 17:27:19 UTC (rev 29297)
@@ -36,6 +36,7 @@
import java.awt.event.MouseAdapter;
import java.awt.event.MouseEvent;
import java.util.ArrayList;
+import java.util.Arrays;
import java.util.Collection;
import java.util.Enumeration;
import java.util.HashMap;
@@ -116,11 +117,11 @@
private JSplitPane split;
private final NetworkTreeTableModel treeTableModel;
- private final CyApplicationManager appManager;
- final CyNetworkManager netmgr;
- final CyNetworkViewManager networkViewManager;
+ private final CyApplicationManager appMgr;
+ final CyNetworkManager netMgr;
+ final CyNetworkViewManager netViewMgr;
- private final DialogTaskManager taskManager;
+ private final DialogTaskManager taskMgr;
private final DynamicTaskFactoryProvisioner factoryProvisioner;
private final JPopupMenu popup;
@@ -138,24 +139,26 @@
/**
*
- * @param applicationManager
- * @param netmgr
- * @param networkViewManager
+ * @param appMgr
+ * @param netMgr
+ * @param netViewMgr
* @param bird
- * @param taskManager
+ * @param taskMgr
*/
- public NetworkPanel(final CyApplicationManager applicationManager,
final CyNetworkManager netmgr,
- final CyNetworkViewManager networkViewManager, final
BirdsEyeViewHandler bird,
- final DialogTaskManager taskManager) {
+ public NetworkPanel(final CyApplicationManager appMgr,
+ final CyNetworkManager netMgr,
+ final CyNetworkViewManager
netViewMgr,
+ final BirdsEyeViewHandler bird,
+ final DialogTaskManager
taskMgr) {
super();
this.treeNodeMap = new HashMap<Long, NetworkTreeNode>();
this.provisionerMap = new HashMap<Object, TaskFactory>();
- this.appManager = applicationManager;
- this.netmgr = netmgr;
- this.networkViewManager = networkViewManager;
- this.taskManager = taskManager;
- this.factoryProvisioner = new
DynamicTaskFactoryProvisioner(appManager);
+ this.appMgr = appMgr;
+ this.netMgr = netMgr;
+ this.netViewMgr = netViewMgr;
+ this.taskMgr = taskMgr;
+ this.factoryProvisioner = new
DynamicTaskFactoryProvisioner(appMgr);
root = new NetworkTreeNode("Network Root", null);
treeTableModel = new NetworkTreeTableModel(this, root);
@@ -248,7 +251,7 @@
}
public void addTaskFactory(TaskFactory factory,
@SuppressWarnings("rawtypes") Map props) {
- addFactory(factory, new TaskFactoryTunableAction(taskManager,
factory, props, appManager, networkViewManager));
+ addFactory(factory, new TaskFactoryTunableAction(taskMgr,
factory, props, appMgr, netViewMgr));
}
public void removeTaskFactory(TaskFactory factory,
@SuppressWarnings("rawtypes") Map props) {
@@ -258,8 +261,8 @@
public void
addNetworkCollectionTaskFactory(NetworkCollectionTaskFactory factory, Map
props) {
TaskFactory provisioner = factoryProvisioner.createFor(factory);
provisionerMap.put(factory, provisioner);
- addFactory(provisioner, new
TaskFactoryTunableAction(taskManager, provisioner, props, appManager,
- networkViewManager));
+ addFactory(provisioner, new TaskFactoryTunableAction(taskMgr,
provisioner, props, appMgr,
+ netViewMgr));
}
public void
removeNetworkCollectionTaskFactory(NetworkCollectionTaskFactory factory, Map
props) {
@@ -269,8 +272,8 @@
public void
addNetworkViewCollectionTaskFactory(NetworkViewCollectionTaskFactory factory,
Map props) {
TaskFactory provisioner = factoryProvisioner.createFor(factory);
provisionerMap.put(factory, provisioner);
- addFactory(provisioner, new
TaskFactoryTunableAction(taskManager, provisioner, props, appManager,
- networkViewManager));
+ addFactory(provisioner, new TaskFactoryTunableAction(taskMgr,
provisioner, props, appMgr,
+ netViewMgr));
}
public void
removeNetworkViewCollectionTaskFactory(NetworkViewCollectionTaskFactory
factory, Map props) {
@@ -280,8 +283,8 @@
public void addNetworkTaskFactory(NetworkTaskFactory factory,
@SuppressWarnings("rawtypes") Map props) {
TaskFactory provisioner = factoryProvisioner.createFor(factory);
provisionerMap.put(factory, provisioner);
- addFactory(provisioner, new
TaskFactoryTunableAction(taskManager, provisioner, props, appManager,
- networkViewManager));
+ addFactory(provisioner, new TaskFactoryTunableAction(taskMgr,
provisioner, props, appMgr,
+ netViewMgr));
}
public void removeNetworkTaskFactory(NetworkTaskFactory factory,
@SuppressWarnings("rawtypes") Map props) {
@@ -291,8 +294,8 @@
public void addNetworkViewTaskFactory(final NetworkViewTaskFactory
factory, @SuppressWarnings("rawtypes") Map props) {
TaskFactory provisioner = factoryProvisioner.createFor(factory);
provisionerMap.put(factory, provisioner);
- addFactory(provisioner, new
TaskFactoryTunableAction(taskManager, provisioner, props, appManager,
- networkViewManager));
+ addFactory(provisioner, new TaskFactoryTunableAction(taskMgr,
provisioner, props, appMgr,
+ netViewMgr));
}
public void removeNetworkViewTaskFactory(NetworkViewTaskFactory
factory, @SuppressWarnings("rawtypes") Map props) {
@@ -353,7 +356,7 @@
}
// // Event handlers /////
-
+
@Override
public void handleEvent(final NetworkAboutToBeDestroyedEvent nde) {
SwingUtilities.invokeLater(new Runnable() {
@@ -522,7 +525,7 @@
if (parentNetwork != null)
this.treeNodeMap.put(parentNetwork.getSUID(),
parentTreeNode);
- if (networkViewManager.viewExists(network))
+ if (netViewMgr.viewExists(network))
dmtn.setNodeColor(Color.black);
this.treeNodeMap.put(network.getSUID(), dmtn);
@@ -542,7 +545,7 @@
* Update selected row.
*/
private final void updateNetworkTreeSelection(final boolean singleSet) {
- final List<CyNetwork> selectedNetworks =
appManager.getSelectedNetworks();
+ final List<CyNetwork> selectedNetworks =
appMgr.getSelectedNetworks();
// Phase 1: Add selected path from GUI status
final List<TreePath> paths = new ArrayList<TreePath>();
@@ -583,61 +586,83 @@
// Sets the "current" network based on last node in the tree
selected
final NetworkTreeNode node = (NetworkTreeNode)
tree.getLastSelectedPathComponent();
+
if (node == null || node.getUserObject() == null)
return;
- final CyNetwork net = node.getNetwork();
- // This is a "network set" node.
- if (net == null) { // When selecting root node all of the
subnetworks
- // are selected.
+ CyNetwork cn = node.getNetwork();
+ final List<CyNetwork> selectedNetworks = new
LinkedList<CyNetwork>();
+
+ if (cn == null) {
+ // This is a "network set" node...
+ // When selecting root node, all of the subnetworks are
selected.
CyRootNetwork root = ((CySubNetwork) ((NetworkTreeNode)
node.getFirstChild()).getNetwork())
.getRootNetwork();
- List<CySubNetwork> subNetworkList =
root.getSubNetworkList();
- List<CyNetwork> networkList = new
LinkedList<CyNetwork>();
- for (CySubNetwork sn : subNetworkList)
- networkList.add(sn);
- if (networkList.size() > 0) {
- appManager.setCurrentNetwork(((NetworkTreeNode)
node.getFirstChild()).getNetwork());
- appManager.setSelectedNetworks(networkList);
- final List<CyNetworkView> selectedViews = new
ArrayList<CyNetworkView>();
- for (final CyNetwork network : networkList) {
- final Collection<CyNetworkView> views =
networkViewManager.getNetworkViews(network);
- if (views.size() != 0)
- selectedViews.addAll(views);
+ // Creates a list of all selected networks
+ List<CySubNetwork> subNetworks =
root.getSubNetworkList();
+
+ for (CySubNetwork sn : subNetworks) {
+ if (netMgr.networkExists(sn.getSUID()))
+ selectedNetworks.add(sn);
+ }
+
+ // Determine the current network
+ if (!selectedNetworks.isEmpty())
+ cn = ((NetworkTreeNode)
node.getFirstChild()).getNetwork();
+ } else {
+ // Regular multiple networks selection...
+ try {
+ // Create a list of all selected networks
+ for (int i = tree.getMinSelectionRow(); i <=
tree.getMaxSelectionRow(); i++) {
+ NetworkTreeNode tn = (NetworkTreeNode)
tree.getPathForRow(i).getLastPathComponent();
+
+ if (tn != null && tn.getUserObject() !=
null && tree.isRowSelected(i))
+
selectedNetworks.add(tn.getNetwork());
}
-
appManager.setSelectedNetworkViews(selectedViews);
+ } catch (Exception ex) {
+ logger.error("Error creating the list of
selected networks", ex);
}
- return;
}
- // No need to set the same network again. It should prevent
infinite
- // loops.
- // Also check if the network still exists (it could have been
removed by
- // another thread).
- if (netmgr.networkExists(net.getSUID()) &&
!net.equals(appManager.getCurrentNetwork()))
- appManager.setCurrentNetwork(net);
-
- // creates a list of all selected networks
- List<CyNetwork> networkList = new LinkedList<CyNetwork>();
- try {
- for (int i = tree.getMinSelectionRow(); i <=
tree.getMaxSelectionRow(); i++) {
- NetworkTreeNode n = (NetworkTreeNode)
tree.getPathForRow(i).getLastPathComponent();
- if (n != null && n.getUserObject() != null &&
tree.isRowSelected(i))
- networkList.add(n.getNetwork());
- }
- } catch (Exception ex) {
- ex.printStackTrace();
+
+ final List<CyNetworkView> selectedViews = new
ArrayList<CyNetworkView>();
+
+ for (final CyNetwork n : selectedNetworks) {
+ final Collection<CyNetworkView> views =
netViewMgr.getNetworkViews(n);
+
+ if (!views.isEmpty())
+ selectedViews.addAll(views);
}
-
- if (networkList.size() > 0) {
- appManager.setSelectedNetworks(networkList);
- final List<CyNetworkView> selectedViews = new
ArrayList<CyNetworkView>();
- for (final CyNetwork network : networkList) {
- final Collection<CyNetworkView> views =
networkViewManager.getNetworkViews(network);
- if (views.size() != 0)
- selectedViews.addAll(views);
+
+ // No need to set the same network again. It should prevent
infinite loops.
+ // Also check if the network still exists (it could have been
removed by another thread).
+ if (cn == null || netMgr.networkExists(cn.getSUID())) {
+ if (cn == null ||
!cn.equals(appMgr.getCurrentNetwork()))
+ appMgr.setCurrentNetwork(cn);
+
+ CyNetworkView cv = null;
+
+ // Try to get the first view of the current network
+ final Collection<CyNetworkView> cnViews = cn != null ?
netViewMgr.getNetworkViews(cn) : null;
+ cv = (cnViews == null || cnViews.isEmpty()) ? null :
cnViews.iterator().next();
+
+ if (cv == null) {
+ // The current network has no view, so try to
get the next existing view of the current selection
+ for (final CyNetwork n : selectedNetworks) {
+ final Collection<CyNetworkView> views =
netViewMgr.getNetworkViews(n);
+
+ if (!views.isEmpty()) {
+ cv = views.iterator().next();
+ break;
+ }
+ }
}
- appManager.setSelectedNetworkViews(selectedViews);
+
+ if (cv == null ||
!cv.equals(appMgr.getCurrentNetworkView()))
+ appMgr.setCurrentNetworkView(cv);
+
+ appMgr.setSelectedNetworks(selectedNetworks);
+ appMgr.setSelectedNetworkViews(selectedViews);
}
}
@@ -679,9 +704,19 @@
return;
}
- final CyNetwork cyNetwork =
netmgr.getNetwork(networkID);
+ final CyNetwork network = netMgr.getNetwork(networkID);
- if (cyNetwork != null) {
+ if (network != null) {
+ // if the network is not selected, select it
+ final List<CyNetwork> selectedList =
appMgr.getSelectedNetworks();
+
+ if (selectedList == null ||
!selectedList.contains(network)) {
+ appMgr.setCurrentNetwork(network);
+
appMgr.setSelectedNetworks(Arrays.asList(new CyNetwork[]{ network }));
+ final Collection<CyNetworkView>
netViews = netViewMgr.getNetworkViews(network);
+ appMgr.setSelectedNetworkViews(new
ArrayList<CyNetworkView>(netViews));
+ }
+
// enable/disable any actions based on state of
system
for (CyAction action : popupActions.values())
action.updateEnableState();
Modified:
core3/impl/trunk/swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkTreeTableModel.java
===================================================================
---
core3/impl/trunk/swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkTreeTableModel.java
2012-05-18 16:51:14 UTC (rev 29296)
+++
core3/impl/trunk/swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkTreeTableModel.java
2012-05-18 17:27:19 UTC (rev 29297)
@@ -83,14 +83,14 @@
if (column == 0)
return node.getUserObject();
else if (column == 1) {
- final CyNetwork cyNetwork =
this.networkPanel.netmgr.getNetwork(node.getNetwork().getSUID());
+ final CyNetwork cyNetwork =
this.networkPanel.netMgr.getNetwork(node.getNetwork().getSUID());
if(cyNetwork == null)
return null;
return "" + cyNetwork.getNodeCount() + "("
+
cyNetwork.getDefaultNodeTable().getMatchingRows(CyNetwork.SELECTED,
true).size() + ")";
} else if (column == 2) {
- final CyNetwork cyNetwork =
this.networkPanel.netmgr.getNetwork(((NetworkTreeNode)
node).getNetwork().getSUID());
+ final CyNetwork cyNetwork =
this.networkPanel.netMgr.getNetwork(((NetworkTreeNode)
node).getNetwork().getSUID());
if(cyNetwork == null)
return null;
Modified:
core3/impl/trunk/swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkViewManager.java
===================================================================
---
core3/impl/trunk/swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkViewManager.java
2012-05-18 16:51:14 UTC (rev 29296)
+++
core3/impl/trunk/swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkViewManager.java
2012-05-18 17:27:19 UTC (rev 29297)
@@ -122,25 +122,28 @@
// UI to select presentation.
private static final String DEFAULT_PRESENTATION = "ding";
- private final CyNetworkViewManager networkViewManager;
- private final CyApplicationManager applicationManager;
- private final RenderingEngineManager renderingEngineManager;
+ private final CyNetworkViewManager netViewMgr;
+ private final CyApplicationManager appMgr;
+ private final RenderingEngineManager renderingEngineMgr;
- public NetworkViewManager(CyApplicationManager appMgr,
CyNetworkViewManager netViewMgr,final RenderingEngineManager
renderingEngineManager,
- CyProperty<Properties> cyProps, CyHelpBroker help) {
+ public NetworkViewManager(final CyApplicationManager appMgr,
+ final
CyNetworkViewManager netViewMgr,
+ final
RenderingEngineManager renderingEngineManager,
+ final
CyProperty<Properties> cyProps,
+ final CyHelpBroker
help) {
if (appMgr == null)
throw new NullPointerException("CyApplicationManager is
null.");
if (netViewMgr == null)
throw new NullPointerException("CyNetworkViewManager is
null.");
- this.renderingEngineManager = renderingEngineManager;
+ this.renderingEngineMgr = renderingEngineManager;
this.factories = new HashMap<String,
RenderingEngineFactory<CyNetwork>>();
- this.networkViewManager = netViewMgr;
- this.applicationManager = appMgr;
+ this.netViewMgr = netViewMgr;
+ this.appMgr = appMgr;
this.props = cyProps.getProperties();
this.desktopPane = new JDesktopPane();
@@ -224,13 +227,13 @@
if (view == null)
return;
- final RenderingEngine<CyNetwork> currentEngine =
applicationManager.getCurrentRenderingEngine();
+ final RenderingEngine<CyNetwork> currentEngine =
appMgr.getCurrentRenderingEngine();
- if (!view.equals(applicationManager.getCurrentNetworkView()))
- applicationManager.setCurrentNetworkView(view);
+ if (netViewMgr.getNetworkViewSet().contains(view) &&
!view.equals(appMgr.getCurrentNetworkView()))
+ appMgr.setCurrentNetworkView(view);
if (currentEngine == null || currentEngine.getViewModel() !=
view)
-
applicationManager.setCurrentRenderingEngine(presentationMap.get(view));
+
appMgr.setCurrentRenderingEngine(presentationMap.get(view));
}
/**
@@ -263,7 +266,7 @@
return;
}
- final Collection<CyNetworkView> views =
networkViewManager.getNetworkViews(e.getNetwork());
+ final Collection<CyNetworkView> views =
netViewMgr.getNetworkViews(e.getNetwork());
CyNetworkView view = null;
if(views.size() != 0)
view = views.iterator().next();
@@ -377,7 +380,7 @@
iframe.addInternalFrameListener(new InternalFrameAdapter() {
public void internalFrameClosing(InternalFrameEvent e) {
- networkViewManager.destroyNetworkView(view);
+ netViewMgr.destroyNetworkView(view);
Component[] components = iframe.getComponents();
for (Component cp : components) {
@@ -396,7 +399,7 @@
final long start = System.currentTimeMillis();
logger.debug("Rendering start: view model = " + view.getSUID());
final RenderingEngine<CyNetwork> renderingEngine =
currentRenderingEngineFactory.createRenderingEngine(iframe, view);
- renderingEngineManager.addRenderingEngine(renderingEngine);
+ renderingEngineMgr.addRenderingEngine(renderingEngine);
logger.debug("Rendering finished in " +
(System.currentTimeMillis() - start) + " m sec.");
presentationMap.put(view, renderingEngine);
Property changes on: core3/samples/trunk/sample28/feature
___________________________________________________________________
Added: svn:ignore
+ target
--
You received this message because you are subscribed to the Google Groups
"cytoscape-cvs" group.
To post to this group, send email to [email protected].
To unsubscribe from this group, send email to
[email protected].
For more options, visit this group at
http://groups.google.com/group/cytoscape-cvs?hl=en.