Author: scooter
Date: 2012-07-12 11:42:22 -0700 (Thu, 12 Jul 2012)
New Revision: 29864
Modified:
core3/gui-distribution/trunk/assembly/src/main/bin/cytoscape.sh
Log:
Make sure to do readlink right and pass the result on to CYTOSCAPE_HOME
Modified: core3/gui-distribution/trunk/assembly/src/main/bin/cytoscape.sh
===================================================================
--- core3/gui-distribution/trunk/assembly/src/main/bin/cytoscape.sh
2012-07-12 18:35:22 UTC (rev 29863)
+++ core3/gui-distribution/trunk/assembly/src/main/bin/cytoscape.sh
2012-07-12 18:42:22 UTC (rev 29864)
@@ -1,4 +1,4 @@
-#!/bin/sh
+#!/bin/bash
#
# Run cytoscape from a jar file
# This script is a UNIX-only (i.e. Linux, Mac OS, etc.) version
@@ -8,7 +8,8 @@
script_path="$(dirname -- $0)"
if [ -h $script_path ]; then
- script_path="$(readlink $script_path)"
+ link="$(readlink $0)"
+ script_path="$(dirname -- $link)"
fi
export JAVA_DEBUG_OPTS="-Xdebug -Xnoagent -Djava.compiler=NONE
-Xrunjdwp:transport=dt_socket,server=y,suspend=y,address=${DEBUG_PORT}"
@@ -34,7 +35,7 @@
# The Cytoscape home directory contains the "framework" directory
# and this script.
-CYTOSCAPE_HOME_REL=`dirname "$0"`
+CYTOSCAPE_HOME_REL=$script_path
CYTOSCAPE_HOME_ABS=`cd "$CYTOSCAPE_HOME_REL"; pwd`
PWD=$(pwd)
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