See 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/1609/changes>

Changes:

[pwang] SetModal true for ImportDialog

[clopes] refs #1383 : adds more tests for a "simple" Cy3 session (one network, 
few nodes/edges)

[jm] Fixes #1259: Added API to PanelTaskManager that allows us to validate and 
write back tunables.

------------------------------------------
[...truncated 14799 lines...]

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 non-varargs call of varargs method with inexact argument type for last 
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 non-varargs call of varargs method with inexact argument type for last 
parameter;
cast to java.lang.Object for a varargs call
cast to java.lang.Object[] for a non-varargs call and to suppress this warning
[INFO] [debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
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-------------------------------------------------------
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Results :

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[JENKINS] Recording test results
[INFO] 
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[WARNING] Warning building bundle 
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matching referal for org.cytoscape.view.vizmap.gui.*
ignoring exception during new ExecutedMojo null
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[INFO] [INFO] Installing 
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Uploaded: 
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[INFO] [INFO] Remote OBR update disabled (enable with -DremoteOBR)

[INFO] --- maven-bundle-plugin:2.3.4:deploy (default-deploy) @ vizmap-gui-impl 
---
[JENKINS] Archiving 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/vizmap-gui-impl/pom.xml>
 to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 
Implementation/modules/org.cytoscape$vizmap-gui-impl/builds/2012-09-04_17-04-00/archive/org.cytoscape/vizmap-gui-impl/3.0.0-alpha10-SNAPSHOT/vizmap-gui-impl-3.0.0-alpha10-SNAPSHOT.pom
[JENKINS] Archiving 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/vizmap-gui-impl/target/vizmap-gui-impl-3.0.0-alpha10-SNAPSHOT.jar>
 to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 
Implementation/modules/org.cytoscape$vizmap-gui-impl/builds/2012-09-04_17-04-00/archive/org.cytoscape/vizmap-gui-impl/3.0.0-alpha10-20120904.221345-290/vizmap-gui-impl-3.0.0-alpha10-20120904.221345-290.jar
[JENKINS] Archiving 
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 to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 
Implementation/modules/org.cytoscape$vizmap-gui-impl/builds/2012-09-04_17-04-00/archive/org.cytoscape/vizmap-gui-impl/3.0.0-alpha10-20120904.221345-290/vizmap-gui-impl-3.0.0-alpha10-20120904.221345-290-sources.jar
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building Cytoscape Work Swing Impl Parent (work-swing-impl-parent) 
3.0.0-alpha10-SNAPSHOT
[INFO] ------------------------------------------------------------------------
ignoring exception during new ExecutedMojo null
[INFO] 
[INFO] --- maven-source-plugin:2.1.2:jar (attach-sources) @ 
work-swing-impl-parent ---
[INFO] 
[INFO] --- maven-install-plugin:2.3.1:install (default-install) @ 
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[INFO] Installing 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/pom.xml>
 to 
/opt/tomcat-home/.m2/repository/org/cytoscape/work-swing-impl-parent/3.0.0-alpha10-SNAPSHOT/work-swing-impl-parent-3.0.0-alpha10-SNAPSHOT.pom
[INFO] 
[INFO] --- maven-deploy-plugin:2.5:deploy (default-deploy) @ 
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[JENKINS] Archiving 
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 to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 
Implementation/modules/org.cytoscape$work-swing-impl-parent/builds/2012-09-04_17-04-00/archive/org.cytoscape/work-swing-impl-parent/3.0.0-alpha10-SNAPSHOT/work-swing-impl-parent-3.0.0-alpha10-SNAPSHOT.pom
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building Cytoscape Work Swing Impl (work-swing-impl) 
3.0.0-alpha10-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ 
work-swing-impl ---
[INFO] Copying 3 resources
[INFO] 
[INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ 
work-swing-impl ---
[INFO] Compiling 33 source files to 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/impl/target/classes>
[INFO] -------------------------------------------------------------
[ERROR] COMPILATION ERROR : 
[INFO] -------------------------------------------------------------
[ERROR] 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/task/JPanelTaskManager.java>:[45,1]
 method does not override or implement a method from a supertype
[INFO] 1 error
[INFO] -------------------------------------------------------------
[JENKINS] Archiving 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/impl/pom.xml>
 to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 
Implementation/modules/org.cytoscape$work-swing-impl/builds/2012-09-04_17-04-00/archive/org.cytoscape/work-swing-impl/3.0.0-alpha10-SNAPSHOT/work-swing-impl-3.0.0-alpha10-SNAPSHOT.pom
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO] 
[INFO] Cytoscape Implementation Parent Project POM ....... SUCCESS [6.785s]
[INFO] Cytoscape BioPAX Impl (biopax-impl) ............... SUCCESS [10.860s]
[INFO] Cytoscape Command Executor Impl (command-executor-impl)  SUCCESS [5.215s]
[INFO] Cytoscape Equations Impl (equations-impl) ......... SUCCESS [11.353s]
[INFO] Cytoscape Model Impl Parent (model-impl-parent) ... SUCCESS [0.527s]
[INFO] Cytoscape Model Impl (model-impl) ................. SUCCESS [15.728s]
[INFO] Cytoscape View Model Impl Parent (viewmodel-impl-parent)  SUCCESS 
[0.603s]
[INFO] Cytoscape View Model Impl (viewmodel-impl) ........ SUCCESS [6.552s]
[INFO] Cytoscape Ding Impl Parent (ding-impl) ............ SUCCESS [0.485s]
[INFO] Cytoscape Ding View/Presentation Impl (ding-presentation-impl)  SUCCESS 
[1:13.449s]
[INFO] org.cytoscape.work-impl ........................... SUCCESS [3.659s]
[INFO] Cytoscape Core Task Impl (core-task-impl) ......... SUCCESS [15.317s]
[INFO] Cytoscape CPath2 Impl (cpath2-impl) ............... SUCCESS [14.972s]
[INFO] Cytoscape Groups Impl (group-impl) ................ SUCCESS [6.659s]
[INFO] Cytoscape IO Impl Parent (io-impl-parent) ......... SUCCESS [0.530s]
[INFO] Cytoscape IO Impl (io-impl) ....................... SUCCESS [25.108s]
[INFO] Cytoscape Event Impl Parent (event-impl-parent) ... SUCCESS [0.409s]
[INFO] Cytoscape Event Impl (event-impl) ................. SUCCESS [11.840s]
[INFO] Cytoscape Layout Impl (layout-impl) ............... SUCCESS [8.944s]
[INFO] Cytoscape Ding View/Presentation Impl Performance 
(ding-impl-performance-debug)  SUCCESS [29.505s]
[INFO] Cytoscape Editor Impl (editor-impl) ............... SUCCESS [5.713s]
[INFO] Cytoscape Equation Functions Impl (equations-functions-impl)  SUCCESS 
[6.260s]
[INFO] Cytoscape Event Impl IT (event-impl-it) ........... SUCCESS [7.893s]
[INFO] Cytoscape Filters Impl (filter-impl) .............. SUCCESS [7.582s]
[INFO] Cytoscape GraphML Impl (graphml-impl) ............. SUCCESS [9.008s]
[INFO] Cytoscape Group Data Impl (group-data-impl) ....... SUCCESS [7.384s]
[INFO] Cytoscape Group View Impl (group-view-impl) ....... SUCCESS [2.819s]
[INFO] Cytoscape IO Impl Performance (io-impl-performance)  SUCCESS [20.635s]
[INFO] Cytoscape Layout Algorithms Impl (layout-cytoscape-impl)  SUCCESS 
[7.426s]
[INFO] Cytoscape JGraph Layout Impl (layout-jgraph-impl) . SUCCESS [3.796s]
[INFO] Cytoscape Prefuse Layout Impl (layout-prefuse-impl)  SUCCESS [4.996s]
[INFO] Cytoscape Linkout Impl (linkout-impl) ............. SUCCESS [6.919s]
[INFO] Cytoscape Log Swing Impl (log-swing-impl) ......... SUCCESS [7.908s]
[INFO] Cytoscape Manual Layout Impl (manual-layout-impl) . SUCCESS [7.201s]
[INFO] Cytoscape Model Impl Performance Debug (model-impl-performance-debug)  
SUCCESS [12.649s]
[INFO] Cytoscape Model Impl Table Performance Debug 
(model-impl-table-performance-debug)  SUCCESS [9.911s]
[INFO] Cytoscape NetworkAnalyzer Impl (network-analyzer-impl)  SUCCESS [9.577s]
[INFO] Cytoscape Merge Impl (network-merge-impl) ......... SUCCESS [5.119s]
[INFO] Cytoscape App Impl (app-impl) ..................... SUCCESS [18.340s]
[INFO] Cytoscape Presentation Impl (presentation-impl) ... SUCCESS [7.269s]
[INFO] Cytoscape Property Impl (property-impl) ........... SUCCESS [3.401s]
[INFO] Cytoscape PSI-MI Impl Parent (psi-mi-impl-parent) . SUCCESS [1.771s]
[INFO] Cytoscape PSI-MI Impl (psi-mi-impl) ............... SUCCESS [26.761s]
[INFO] Cytoscape PSI-MI Impl Performance (psi-mi-impl-performance)  SUCCESS 
[38.978s]
[INFO] Cytoscape SBML Impl (sbml-impl) ................... SUCCESS [7.272s]
[INFO] Cytoscape Search Impl (search-impl) ............... SUCCESS [3.168s]
[INFO] Cytoscape Session Impl Parent (session-impl-parent)  SUCCESS [0.655s]
[INFO] Cytoscape Session Impl (session-impl) ............. SUCCESS [4.000s]
[INFO] Cytoscape Datasource Impl (datasource-impl) ....... SUCCESS [4.957s]
[INFO] org.cytoscape.work-headless-impl .................. SUCCESS [3.424s]
[INFO] Cytoscape VizMap Impl Parent (vizmap-impl-parent) . SUCCESS [0.605s]
[INFO] Cytoscape VizMap Impl (vizmap-impl) ............... SUCCESS [11.828s]
[INFO] Cytoscape Application Impl (application-impl) ..... SUCCESS [7.400s]
[INFO] Cytoscape VizMap GUI Impl (vizmap-gui-impl) ....... SUCCESS [8.244s]
[INFO] Cytoscape Work Swing Impl Parent (work-swing-impl-parent)  SUCCESS 
[1.405s]
[INFO] Cytoscape Work Swing Impl (work-swing-impl) ....... FAILURE [1.759s]
[INFO] Cytoscape Session Impl Integration Test (session-impl-integration-test)  
SKIPPED
[INFO] Cytoscape Help Impl (help-impl) ................... SKIPPED
[INFO] Cytoscape Swing Utility Impl (swing-util-impl) .... SKIPPED
[INFO] Cytoscape Swing Application Impl (swing-application-impl)  SKIPPED
[INFO] Cytoscape Table Browser Impl (table-browser-impl) . SKIPPED
[INFO] Cytoscape Table Import Impl (table-import-impl) ... SKIPPED
[INFO] Cytoscape Biomart Webservice Impl (webservice-biomart-client-impl)  
SKIPPED
[INFO] Cytoscape Webservice Impl (webservice-impl) ....... SKIPPED
[INFO] Cytoscape NCBI Webservice Impl (webservice-ncbi-client-impl)  SKIPPED
[INFO] Cytoscape PSIQUIC Web Service Impl (webservice-psicquic-client-impl)  
SKIPPED
[INFO] Cytoscape BioGrid Datasource Impl (datasource-biogrid-impl)  SKIPPED
[INFO] Cytoscape Welcome Screen Impl (welcome-impl) ...... SKIPPED
[INFO] Cytoscape GUI Command Line Parser Impl (gui-cmdline-parser-impl)  SKIPPED
[INFO] Cytoscape Edge Bundler Impl (edge-bundler-impl) ... SKIPPED
[INFO] Cytoscape Scripting Impl (scripting-impl) ......... SKIPPED
[INFO] Cytoscape Headless Application Impl (headless-application-impl)  SKIPPED
[INFO] Cytoscape Headless Command Line Parser Impl 
(headless-cmdline-parser-impl)  SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 9:46.026s
[INFO] Finished at: Tue Sep 04 17:13:50 GMT-05:00 2012
[INFO] Final Memory: 133M/318M
[INFO] ------------------------------------------------------------------------
mavenExecutionResult exceptions not empty
message : Failed to execute goal 
org.apache.maven.plugins:maven-compiler-plugin:2.3.2:compile (default-compile) 
on project work-swing-impl: Compilation failure
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/task/JPanelTaskManager.java>:[45,1]
 method does not override or implement a method from a supertype

cause : Compilation failure
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/task/JPanelTaskManager.java>:[45,1]
 method does not override or implement a method from a supertype

Stack trace : 
org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal 
org.apache.maven.plugins:maven-compiler-plugin:2.3.2:compile (default-compile) 
on project work-swing-impl: Compilation failure
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/task/JPanelTaskManager.java>:[45,1]
 method does not override or implement a method from a supertype

        at 
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:213)
        at 
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
        at 
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
        at 
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84)
        at 
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59)
        at 
org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183)
        at 
org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161)
        at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319)
        at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156)
        at 
org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at 
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
        at 
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
        at java.lang.reflect.Method.invoke(Method.java:597)
        at 
org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329)
        at 
org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239)
        at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158)
        at hudson.maven.Maven3Builder.call(Maven3Builder.java:112)
        at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
        at hudson.remoting.UserRequest.perform(UserRequest.java:118)
        at hudson.remoting.UserRequest.perform(UserRequest.java:48)
        at hudson.remoting.Request$2.run(Request.java:287)
        at 
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
        at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
        at java.util.concurrent.FutureTask.run(FutureTask.java:138)
        at 
java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
        at 
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
        at java.lang.Thread.run(Thread.java:662)
Caused by: org.apache.maven.plugin.CompilationFailureException: Compilation 
failure
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/task/JPanelTaskManager.java>:[45,1]
 method does not override or implement a method from a supertype

        at 
org.apache.maven.plugin.AbstractCompilerMojo.execute(AbstractCompilerMojo.java:656)
        at org.apache.maven.plugin.CompilerMojo.execute(CompilerMojo.java:128)
        at 
org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101)
        at 
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209)
        ... 27 more
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channel stopped
Skipping sonar analysis due to bad build status FAILURE

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