See 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/1706/changes>

Changes:

[scooter] Two changes.  First, I discovered that there was no way for a custom 
graphic to support
the getIdentifier() method since it had no access to CustomGraphicsManager's 
internals.
I added a setIdentifer() and made the CustomGraphicsManager responsible to 
providing an
identifier if there wasn't one.  Second, I added explicit support for a base 
CustomGraphicsLayer.
In this case, we use the CustomGraphicsLayer as a custom paint to paint the 
node shape and nothing
more.

------------------------------------------
[...truncated 4948 lines...]
[INFO] --- maven-compiler-plugin:2.3.2:testCompile (default-testCompile) @ 
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-------------------------------------------------------
 T E S T S
-------------------------------------------------------

[INFO] --- maven-surefire-plugin:2.12:test (default-test) @ viewmodel-impl ---
Running org.cytoscape.view.model.CyNetworkViewManagerTest
Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.451 sec

Results :

Tests run: 5, Failures: 0, Errors: 0, Skipped: 0

[JENKINS] Recording test results
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[INFO] 
[INFO] --- maven-bundle-plugin:2.3.4:deploy (default-deploy) @ viewmodel-impl 
---
[INFO] Remote OBR update disabled (enable with -DremoteOBR)
[JENKINS] Archiving 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/viewmodel-impl/impl/pom.xml>
 to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 
Implementation/modules/org.cytoscape$viewmodel-impl/builds/2012-09-22_20-52-15/archive/org.cytoscape/viewmodel-impl/3.0.0-alpha10-SNAPSHOT/viewmodel-impl-3.0.0-alpha10-SNAPSHOT.pom
[JENKINS] Archiving 
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[JENKINS] Archiving 
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 to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 
Implementation/modules/org.cytoscape$viewmodel-impl/builds/2012-09-22_20-52-15/archive/org.cytoscape/viewmodel-impl/3.0.0-alpha10-20120923.015256-404/viewmodel-impl-3.0.0-alpha10-20120923.015256-404-sources.jar
[JENKINS] Archiving 
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 to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 
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[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building Cytoscape Ding Impl Parent (ding-impl) 3.0.0-alpha10-SNAPSHOT
[INFO] ------------------------------------------------------------------------
ignoring exception during new ExecutedMojo null
[INFO] 
[INFO] --- maven-source-plugin:2.1.2:jar (attach-sources) @ ding-impl ---
[INFO] [INFO] Installing 
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 to 
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[INFO] --- maven-install-plugin:2.3.1:install (default-install) @ ding-impl ---
[INFO] Downloading: 
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[INFO] --- maven-deploy-plugin:2.5:deploy (default-deploy) @ ding-impl ---
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[JENKINS] Archiving 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/ding-impl/pom.xml>
 to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 
Implementation/modules/org.cytoscape$ding-impl/builds/2012-09-22_20-52-15/archive/org.cytoscape/ding-impl/3.0.0-alpha10-SNAPSHOT/ding-impl-3.0.0-alpha10-SNAPSHOT.pom
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building Cytoscape Ding View/Presentation Impl (ding-presentation-impl) 
3.0.0-alpha10-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] [debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 38 resources

[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ 
ding-presentation-impl ---
[INFO] 
[INFO] --- maven-compiler-plugin:2.3.2:compile (default-compile) @ 
ding-presentation-impl ---
[INFO] Compiling 281 source files to 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/ding-impl/ding-presentation-impl/target/classes>
[INFO] -------------------------------------------------------------
[ERROR] COMPILATION ERROR : 
[INFO] -------------------------------------------------------------
[ERROR] 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/customgraphicsmgr/internal/CustomGraphicsManagerImpl.java>:[160,11]
 cannot find symbol
symbol  : method setIdentifier(java.lang.Long)
location: interface 
org.cytoscape.view.presentation.customgraphics.CyCustomGraphics
[INFO] 1 error
[INFO] -------------------------------------------------------------
[JENKINS] Archiving 
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/ding-impl/ding-presentation-impl/pom.xml>
 to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 
Implementation/modules/org.cytoscape$ding-presentation-impl/builds/2012-09-22_20-52-15/archive/org.cytoscape/ding-presentation-impl/3.0.0-alpha10-SNAPSHOT/ding-presentation-impl-3.0.0-alpha10-SNAPSHOT.pom
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO] 
[INFO] Cytoscape Implementation Parent Project POM ....... SUCCESS [3.455s]
[INFO] Cytoscape BioPAX Impl (biopax-impl) ............... SUCCESS [6.448s]
[INFO] Cytoscape Command Executor Impl (command-executor-impl)  SUCCESS [3.300s]
[INFO] Cytoscape Equations Impl (equations-impl) ......... SUCCESS [7.904s]
[INFO] Cytoscape Model Impl Parent (model-impl-parent) ... SUCCESS [0.467s]
[INFO] Cytoscape Model Impl (model-impl) ................. SUCCESS [8.673s]
[INFO] Cytoscape View Model Impl Parent (viewmodel-impl-parent)  SUCCESS 
[0.440s]
[INFO] Cytoscape View Model Impl (viewmodel-impl) ........ SUCCESS [3.666s]
[INFO] Cytoscape Ding Impl Parent (ding-impl) ............ SUCCESS [0.519s]
[INFO] Cytoscape Ding View/Presentation Impl (ding-presentation-impl)  FAILURE 
[2.321s]
[INFO] org.cytoscape.work-impl ........................... SKIPPED
[INFO] Cytoscape Core Task Impl (core-task-impl) ......... SKIPPED
[INFO] Cytoscape CPath2 Impl (cpath2-impl) ............... SKIPPED
[INFO] Cytoscape Groups Impl (group-impl) ................ SKIPPED
[INFO] Cytoscape IO Impl Parent (io-impl-parent) ......... SKIPPED
[INFO] Cytoscape IO Impl (io-impl) ....................... SKIPPED
[INFO] Cytoscape Event Impl Parent (event-impl-parent) ... SKIPPED
[INFO] Cytoscape Event Impl (event-impl) ................. SKIPPED
[INFO] Cytoscape Layout Impl (layout-impl) ............... SKIPPED
[INFO] Cytoscape Ding View/Presentation Impl Performance 
(ding-impl-performance-debug)  SKIPPED
[INFO] Cytoscape Editor Impl (editor-impl) ............... SKIPPED
[INFO] Cytoscape Equation Functions Impl (equations-functions-impl)  SKIPPED
[INFO] Cytoscape Filters Impl (filter-impl) .............. SKIPPED
[INFO] Cytoscape GraphML Impl (graphml-impl) ............. SKIPPED
[INFO] Cytoscape Group Data Impl (group-data-impl) ....... SKIPPED
[INFO] Cytoscape Group View Impl (group-view-impl) ....... SKIPPED
[INFO] Cytoscape IO Impl Performance (io-impl-performance)  SKIPPED
[INFO] Cytoscape Layout Algorithms Impl (layout-cytoscape-impl)  SKIPPED
[INFO] Cytoscape JGraph Layout Impl (layout-jgraph-impl) . SKIPPED
[INFO] Cytoscape Prefuse Layout Impl (layout-prefuse-impl)  SKIPPED
[INFO] Cytoscape Linkout Impl (linkout-impl) ............. SKIPPED
[INFO] Cytoscape Log Swing Impl (log-swing-impl) ......... SKIPPED
[INFO] Cytoscape Manual Layout Impl (manual-layout-impl) . SKIPPED
[INFO] Cytoscape Model Impl Performance Debug (model-impl-performance-debug)  
SKIPPED
[INFO] Cytoscape Model Impl Table Performance Debug 
(model-impl-table-performance-debug)  SKIPPED
[INFO] Cytoscape NetworkAnalyzer Impl (network-analyzer-impl)  SKIPPED
[INFO] Cytoscape Merge Impl (network-merge-impl) ......... SKIPPED
[INFO] Cytoscape App Impl (app-impl) ..................... SKIPPED
[INFO] Cytoscape Presentation Impl (presentation-impl) ... SKIPPED
[INFO] Cytoscape Property Impl (property-impl) ........... SKIPPED
[INFO] Cytoscape PSI-MI Impl Parent (psi-mi-impl-parent) . SKIPPED
[INFO] Cytoscape PSI-MI Impl (psi-mi-impl) ............... SKIPPED
[INFO] Cytoscape PSI-MI Impl Performance (psi-mi-impl-performance)  SKIPPED
[INFO] Cytoscape SBML Impl (sbml-impl) ................... SKIPPED
[INFO] Cytoscape Search Impl (search-impl) ............... SKIPPED
[INFO] Cytoscape Session Impl Parent (session-impl-parent)  SKIPPED
[INFO] Cytoscape Session Impl (session-impl) ............. SKIPPED
[INFO] Cytoscape Datasource Impl (datasource-impl) ....... SKIPPED
[INFO] org.cytoscape.work-headless-impl .................. SKIPPED
[INFO] Cytoscape VizMap Impl Parent (vizmap-impl-parent) . SKIPPED
[INFO] Cytoscape VizMap Impl (vizmap-impl) ............... SKIPPED
[INFO] Cytoscape Application Impl (application-impl) ..... SKIPPED
[INFO] Cytoscape VizMap GUI Impl (vizmap-gui-impl) ....... SKIPPED
[INFO] Cytoscape Work Swing Impl Parent (work-swing-impl-parent)  SKIPPED
[INFO] Cytoscape Work Swing Impl (work-swing-impl) ....... SKIPPED
[INFO] Cytoscape Session Impl Integration Test (session-impl-integration-test)  
SKIPPED
[INFO] Cytoscape Help Impl (help-impl) ................... SKIPPED
[INFO] Cytoscape Swing Utility Impl (swing-util-impl) .... SKIPPED
[INFO] Cytoscape Swing Application Impl (swing-application-impl)  SKIPPED
[INFO] Cytoscape Table Browser Impl (table-browser-impl) . SKIPPED
[INFO] Cytoscape Table Import Impl (table-import-impl) ... SKIPPED
[INFO] Cytoscape Biomart Webservice Impl (webservice-biomart-client-impl)  
SKIPPED
[INFO] Cytoscape Webservice Impl (webservice-impl) ....... SKIPPED
[INFO] Cytoscape NCBI Webservice Impl (webservice-ncbi-client-impl)  SKIPPED
[INFO] Cytoscape PSIQUIC Web Service Impl (webservice-psicquic-client-impl)  
SKIPPED
[INFO] Cytoscape BioGrid Datasource Impl (datasource-biogrid-impl)  SKIPPED
[INFO] Cytoscape Welcome Screen Impl (welcome-impl) ...... SKIPPED
[INFO] Cytoscape GUI Command Line Parser Impl (gui-cmdline-parser-impl)  SKIPPED
[INFO] Cytoscape Edge Bundler Impl (edge-bundler-impl) ... SKIPPED
[INFO] Cytoscape Scripting Impl (scripting-impl) ......... SKIPPED
[INFO] Cytoscape Headless Application Impl (headless-application-impl)  SKIPPED
[INFO] Cytoscape Headless Command Line Parser Impl 
(headless-cmdline-parser-impl)  SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 42.237s
[INFO] Finished at: Sat Sep 22 20:53:00 GMT-05:00 2012
[INFO] Final Memory: 46M/109M
[INFO] ------------------------------------------------------------------------
Waiting for Jenkins to finish collecting data
mavenExecutionResult exceptions not empty
message : Failed to execute goal 
org.apache.maven.plugins:maven-compiler-plugin:2.3.2:compile (default-compile) 
on project ding-presentation-impl: Compilation failure
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/customgraphicsmgr/internal/CustomGraphicsManagerImpl.java>:[160,11]
 cannot find symbol
symbol  : method setIdentifier(java.lang.Long)
location: interface 
org.cytoscape.view.presentation.customgraphics.CyCustomGraphics

cause : Compilation failure
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/customgraphicsmgr/internal/CustomGraphicsManagerImpl.java>:[160,11]
 cannot find symbol
symbol  : method setIdentifier(java.lang.Long)
location: interface 
org.cytoscape.view.presentation.customgraphics.CyCustomGraphics

Stack trace : 
org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal 
org.apache.maven.plugins:maven-compiler-plugin:2.3.2:compile (default-compile) 
on project ding-presentation-impl: Compilation failure
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/customgraphicsmgr/internal/CustomGraphicsManagerImpl.java>:[160,11]
 cannot find symbol
symbol  : method setIdentifier(java.lang.Long)
location: interface 
org.cytoscape.view.presentation.customgraphics.CyCustomGraphics

        at 
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:213)
        at 
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153)
        at 
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145)
        at 
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84)
        at 
org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59)
        at 
org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183)
        at 
org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161)
        at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319)
        at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156)
        at 
org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at 
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
        at 
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
        at java.lang.reflect.Method.invoke(Method.java:597)
        at 
org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329)
        at 
org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239)
        at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158)
        at hudson.maven.Maven3Builder.call(Maven3Builder.java:112)
        at hudson.maven.Maven3Builder.call(Maven3Builder.java:70)
        at hudson.remoting.UserRequest.perform(UserRequest.java:118)
        at hudson.remoting.UserRequest.perform(UserRequest.java:48)
        at hudson.remoting.Request$2.run(Request.java:287)
        at 
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441)
        at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
        at java.util.concurrent.FutureTask.run(FutureTask.java:138)
        at 
java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
        at 
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
        at java.lang.Thread.run(Thread.java:662)
Caused by: org.apache.maven.plugin.CompilationFailureException: Compilation 
failure
<http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/customgraphicsmgr/internal/CustomGraphicsManagerImpl.java>:[160,11]
 cannot find symbol
symbol  : method setIdentifier(java.lang.Long)
location: interface 
org.cytoscape.view.presentation.customgraphics.CyCustomGraphics

        at 
org.apache.maven.plugin.AbstractCompilerMojo.execute(AbstractCompilerMojo.java:656)
        at org.apache.maven.plugin.CompilerMojo.execute(CompilerMojo.java:128)
        at 
org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo(DefaultBuildPluginManager.java:101)
        at 
org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:209)
        ... 27 more
Sending e-mails to: [email protected]
channel stopped
Skipping sonar analysis due to bad build status FAILURE

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