See <http://code.cytoscape.org/jenkins/job/Cytoscape_2.X_application/2/>
------------------------------------------ [...truncated 3703 lines...] A coreplugins/ManualLayout/src/main/java/ManualLayout/control/actions/stack/VStackLeft.java A coreplugins/ManualLayout/src/main/java/ManualLayout/control/actions/stack/VStackRight.java A coreplugins/ManualLayout/src/main/java/ManualLayout/control/actions/stack/VStackCenter.java A coreplugins/ManualLayout/src/main/java/ManualLayout/control/actions/stack/HStackCenter.java A coreplugins/ManualLayout/src/main/java/ManualLayout/control/actions/align AU coreplugins/ManualLayout/src/main/java/ManualLayout/control/actions/align/HAlignRight.java AU coreplugins/ManualLayout/src/main/java/ManualLayout/control/actions/align/VAlignCenter.java AU coreplugins/ManualLayout/src/main/java/ManualLayout/control/actions/align/HAlignCenter.java AU coreplugins/ManualLayout/src/main/java/ManualLayout/control/actions/align/VAlignTop.java AU coreplugins/ManualLayout/src/main/java/ManualLayout/control/actions/align/VAlignBottom.java AU coreplugins/ManualLayout/src/main/java/ManualLayout/control/actions/align/HAlignLeft.java A coreplugins/ManualLayout/src/main/java/ManualLayout/control/view AU coreplugins/ManualLayout/src/main/java/ManualLayout/control/view/DistPanel.java A coreplugins/ManualLayout/src/main/java/ManualLayout/control/view/StackPanel.java AU coreplugins/ManualLayout/src/main/java/ManualLayout/control/view/AlignPanel.java A coreplugins/ManualLayout/src/main/java/ManualLayout/control/ControlPanelAction.java A coreplugins/ManualLayout/src/main/java/ManualLayout/scale A coreplugins/ManualLayout/src/main/java/ManualLayout/scale/ScalePanelAction.java A coreplugins/ManualLayout/src/main/java/ManualLayout/scale/ScalePanel.java AU coreplugins/ManualLayout/src/main/java/ManualLayout/scale/ScaleLayouter.java A coreplugins/ManualLayout/src/main/java/ManualLayout/scale/ScalingDirectionTracker.java A coreplugins/ManualLayout/src/main/java/ManualLayout/common A coreplugins/ManualLayout/src/main/java/ManualLayout/common/SliderStateTracker.java A coreplugins/ManualLayout/src/main/java/ManualLayout/common/CheckBoxTracker.java A coreplugins/ManualLayout/src/main/java/ManualLayout/common/PolymorphicSlider.java AU coreplugins/ManualLayout/src/main/java/ManualLayout/common/GraphConverter2.java A coreplugins/ManualLayout/src/main/java/ManualLayout/common/AbstractManualLayoutAction.java A coreplugins/ManualLayout/src/main/java/ManualLayout/common/SliderTracker.java AU coreplugins/ManualLayout/src/main/java/ManualLayout/ManualLayoutPlugin.java A coreplugins/ManualLayout/src/main/java/ManualLayout/rotate AU coreplugins/ManualLayout/src/main/java/ManualLayout/rotate/RotationLayouter.java A coreplugins/ManualLayout/src/main/java/ManualLayout/rotate/RotatePanelAction.java A coreplugins/ManualLayout/src/main/java/ManualLayout/rotate/RotatePanel.java A coreplugins/ManualLayout/src/main/resources AU coreplugins/ManualLayout/src/main/resources/H_ALIGN_LEFT.gif AU coreplugins/ManualLayout/src/main/resources/V_DIST_BOTTOM.gif AU coreplugins/ManualLayout/src/main/resources/H_STACK_CENTER.gif AU coreplugins/ManualLayout/src/main/resources/V_ALIGN_CENTER.gif AU coreplugins/ManualLayout/src/main/resources/H_DIST_LEFT.gif AU coreplugins/ManualLayout/src/main/resources/V_STACK_RIGHT.gif AU coreplugins/ManualLayout/src/main/resources/V_DIST_CENTER.gif AU coreplugins/ManualLayout/src/main/resources/V_STACK_CENTER.gif AU coreplugins/ManualLayout/src/main/resources/H_STACK_TOP.gif AU coreplugins/ManualLayout/src/main/resources/H_ALIGN_RIGHT.gif AU coreplugins/ManualLayout/src/main/resources/H_STACK_BOTTOM.gif AU coreplugins/ManualLayout/src/main/resources/V_ALIGN_TOP.gif AU coreplugins/ManualLayout/src/main/resources/H_ALIGN_CENTER.gif AU coreplugins/ManualLayout/src/main/resources/V_ALIGN_BOTTOM.gif AU coreplugins/ManualLayout/src/main/resources/V_STACK_LEFT.gif A coreplugins/ManualLayout/src/main/resources/ManualLayout A coreplugins/ManualLayout/src/main/resources/ManualLayout/plugin.props AU coreplugins/ManualLayout/src/main/resources/H_DIST_RIGHT.gif AU coreplugins/ManualLayout/src/main/resources/V_DIST_TOP.gif AU coreplugins/ManualLayout/src/main/resources/H_DIST_CENTER.gif A coreplugins/ManualLayout/pom.xml A coreplugins/QuickFind A coreplugins/QuickFind/src A coreplugins/QuickFind/src/test A coreplugins/QuickFind/src/test/java A coreplugins/QuickFind/src/test/java/csplugins A coreplugins/QuickFind/src/test/java/csplugins/test A coreplugins/QuickFind/src/test/java/csplugins/test/widgets A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/uiTests A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/uiTests/view A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/uiTests/view/RunQuickFindPanel.java A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/uiTests/view/RunTextIndexComboBox.java A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/uiTests/view/package.html A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/uiTests/package.html A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/unitTests A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/text A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/text/TestNumberIndex.java A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/text/TestTextIndex.java A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/text/package.html A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/view A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/view/TestTextIndexComboBox.java A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/view/package.html A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/unitTests/package.html A coreplugins/QuickFind/src/test/java/csplugins/test/widgets/test/package.html A coreplugins/QuickFind/src/test/java/csplugins/test/quickfind A coreplugins/QuickFind/src/test/java/csplugins/test/quickfind/test A coreplugins/QuickFind/src/test/java/csplugins/test/quickfind/test/TestCyAttributesUtil.java A coreplugins/QuickFind/src/test/java/csplugins/test/quickfind/test/TestQuickFind.java A coreplugins/QuickFind/src/test/java/csplugins/test/quickfind/test/package.html A coreplugins/QuickFind/src/test/java/csplugins/test/package.html A coreplugins/QuickFind/src/test/resources A coreplugins/QuickFind/src/main A coreplugins/QuickFind/src/main/java A coreplugins/QuickFind/src/main/java/csplugins A coreplugins/QuickFind/src/main/java/csplugins/widgets A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/index A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/index/IndexFactory.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/index/NumberIndex.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/index/NumberIndexImpl.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/index/Trie.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/index/GenericIndex.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/index/Hit.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/index/GenericIndexImpl.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/index/TextIndex.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/index/IndexListener.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/index/TextIndexImpl.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/index/package.html A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/view A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/view/AutoCompleteDocument.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/view/ComboBoxFactory.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/view/TextBoxRenderer.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/view/TextIndexComboBox.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/autocomplete/view/package.html A coreplugins/QuickFind/src/main/java/csplugins/widgets/slider A coreplugins/QuickFind/src/main/java/csplugins/widgets/slider/JRangeSliderExtended.java A coreplugins/QuickFind/src/main/java/csplugins/widgets/slider/package.html A coreplugins/QuickFind/src/main/java/csplugins/quickfind A coreplugins/QuickFind/src/main/java/csplugins/quickfind/view A coreplugins/QuickFind/src/main/java/csplugins/quickfind/view/QuickFindConfigDialog.java A coreplugins/QuickFind/src/main/java/csplugins/quickfind/view/QuickFindPanel.java A coreplugins/QuickFind/src/main/java/csplugins/quickfind/view/package.html A coreplugins/QuickFind/src/main/java/csplugins/quickfind/util A coreplugins/QuickFind/src/main/java/csplugins/quickfind/util/QuickFindImpl.java A coreplugins/QuickFind/src/main/java/csplugins/quickfind/util/CyAttributesUtil.java A coreplugins/QuickFind/src/main/java/csplugins/quickfind/util/QuickFindListener.java A coreplugins/QuickFind/src/main/java/csplugins/quickfind/util/QuickFindFactory.java A coreplugins/QuickFind/src/main/java/csplugins/quickfind/util/TaskMonitorBase.java A coreplugins/QuickFind/src/main/java/csplugins/quickfind/util/IndexType.java A coreplugins/QuickFind/src/main/java/csplugins/quickfind/util/QuickFind.java A coreplugins/QuickFind/src/main/java/csplugins/quickfind/util/package.html A coreplugins/QuickFind/src/main/java/csplugins/quickfind/package.html A coreplugins/QuickFind/src/main/java/csplugins/quickfind/plugin A coreplugins/QuickFind/src/main/java/csplugins/quickfind/plugin/resources A coreplugins/QuickFind/src/main/java/csplugins/quickfind/plugin/QuickFindPlugIn.java A coreplugins/QuickFind/src/main/java/csplugins/quickfind/plugin/package.html A coreplugins/QuickFind/src/main/java/prefuse A coreplugins/QuickFind/src/main/java/prefuse/data A coreplugins/QuickFind/src/main/java/prefuse/data/query A coreplugins/QuickFind/src/main/java/prefuse/data/query/NumberRangeModel.java A coreplugins/QuickFind/src/main/java/prefuse/util A coreplugins/QuickFind/src/main/java/prefuse/util/TypeLib.java A coreplugins/QuickFind/src/main/java/prefuse/util/ui A coreplugins/QuickFind/src/main/java/prefuse/util/ui/JRangeSlider.java A coreplugins/QuickFind/src/main/java/prefuse/util/ui/ValuedRangeModel.java A coreplugins/QuickFind/src/main/resources A coreplugins/QuickFind/src/main/resources/csplugins A coreplugins/QuickFind/src/main/resources/csplugins/quickfind A coreplugins/QuickFind/src/main/resources/csplugins/quickfind/plugin A coreplugins/QuickFind/src/main/resources/csplugins/quickfind/plugin/plugin.props A coreplugins/QuickFind/src/main/resources/resources AU coreplugins/QuickFind/src/main/resources/resources/config.png A coreplugins/QuickFind/UI_Testing.txt A coreplugins/QuickFind/pom.xml A coreplugins/QuickFind/README.txt A coreplugins/EquationFunctions A coreplugins/EquationFunctions/src A coreplugins/EquationFunctions/src/main A coreplugins/EquationFunctions/src/main/java A coreplugins/EquationFunctions/src/main/java/org A coreplugins/EquationFunctions/src/main/java/org/cytoscape A coreplugins/EquationFunctions/src/main/java/org/cytoscape/EquationFunctions A coreplugins/EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/functions A coreplugins/EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/functions/InDegree.java A coreplugins/EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/functions/OutDegree.java A coreplugins/EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/functions/TargetID.java A coreplugins/EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/functions/Degree.java A coreplugins/EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/functions/SourceID.java A coreplugins/EquationFunctions/src/main/java/org/cytoscape/EquationFunctions/EquationFunctionsPlugin.java A coreplugins/EquationFunctions/src/main/resources A coreplugins/EquationFunctions/src/main/resources/org A coreplugins/EquationFunctions/src/main/resources/org/cytoscape A coreplugins/EquationFunctions/src/main/resources/org/cytoscape/EquationFunctions A coreplugins/EquationFunctions/src/main/resources/org/cytoscape/EquationFunctions/plugin.props A coreplugins/EquationFunctions/pom.xml A coreplugins/EquationFunctions/classes A pom.xml AU README.txt A webstart A webstart/src A webstart/src/main A webstart/src/main/jnlp A webstart/src/main/jnlp/template.vm A webstart/pom.xml A webstart/README.txt U . At revision 30466 Parsing POMs Discovered a new module cytoscape:parent Cytoscape Parent POM Discovered a new module cytoscape.corelibs:parent Cytoscape Core Libraries Parent POM Discovered a new module cytoscape.corelibs:commons-cli-1-x-cytocape-custom commons-cli-1-x-cytocape-custom Discovered a new module cytoscape.corelibs:equations equations Discovered a new module cytoscape.corelibs:util-intr util-intr Discovered a new module cytoscape.corelibs:geom-spacial geom-spacial Discovered a new module cytoscape.corelibs:geom-rtree geom-rtree Discovered a new module cytoscape.corelibs:giny GINY API Discovered a new module cytoscape.corelibs:graph-fixed graph-fixed Discovered a new module cytoscape.corelibs:graph-dynamic graph-dynamic Discovered a new module cytoscape.corelibs:nerius-math-xform nerius-math-xform Discovered a new module cytoscape.corelibs:obo obo Discovered a new module cytoscape.corelibs:phoebe-dnd phoebe-dnd Discovered a new module cytoscape.corelibs:render-immed render-immed Discovered a new module cytoscape.corelibs:render-export render-export Discovered a new module cytoscape.corelibs:render-stateful render-stateful Discovered a new module cytoscape.corelibs:task task Discovered a new module cytoscape.corelibs:undo-support undo-support Discovered a new module cytoscape.corelibs:fing fing Discovered a new module cytoscape.corelibs:ding ding Discovered a new module cytoscape.corelibs:docs Cytoscape Documentation Discovered a new module cytoscape:application Cytoscape Application Discovered a new module cytoscape.coreplugins:parent Cytoscape Core Plugins Parent POM Discovered a new module cytoscape.coreplugins:advanced-network-merge Advanced Network Merge Discovered a new module cytoscape.coreplugins:automatic-layout Automatic Layout Discovered a new module cytoscape.coreplugins:biomart-client BioMart Client Discovered a new module cytoscape.coreplugins:biopax BioPAX Discovered a new module cytoscape.coreplugins:editor Editor Discovered a new module cytoscape.coreplugins:equation-functions Equation Functions Discovered a new module cytoscape.coreplugins:manual-layout Manual Layout Discovered a new module cytoscape.coreplugins:ncbi-client NCBI Client Discovered a new module cytoscape.coreplugins:psi-mi PSI-MI Discovered a new module cytoscape.coreplugins:quickfind QuickFind Discovered a new module cytoscape.coreplugins:rfilters RFilters Discovered a new module cytoscape.coreplugins:sbml-reader SBML Reader Discovered a new module cytoscape.coreplugins:table-import Table Import Discovered a new module cytoscape.coreplugins:attribute-browser Attribute Browser Discovered a new module cytoscape.coreplugins:cpath cPath Discovered a new module cytoscape.coreplugins:cpath2 cPath2 Discovered a new module cytoscape.coreplugins:filters Filters Discovered a new module cytoscape.coreplugins:linkout Linkout Discovered a new module cytoscape.coreplugins:core-commands Core Commands Plugin Discovered a new module cytoscape.coreplugins:network-analyzer NetworkAnalyzer Discovered a new module cytoscape:cytoscape Cytoscape Distribution Modules changed, recalculating dependency graph [trunk] $ java -Djava.awt.headless=true -Xmx768M -XX:MaxPermSize=256M -cp /opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-agent-1.2.jar:/opt/maven/boot/plexus-classworlds-2.4.jar org.jvnet.hudson.maven3.agent.Maven3Main /opt/maven /var/lib/tomcat6/webapps/jenkins/WEB-INF/lib/remoting-2.11.jar /opt/tomcat-home/jenkins/plugins/maven-plugin/WEB-INF/lib/maven3-interceptor-1.2.jar 57048 ERROR: Failed to parse POMs java.io.IOException: Cannot run program "java" (in directory "<http://code.cytoscape.org/jenkins/job/Cytoscape_2.X_application/ws/trunk";)>: java.io.IOException: error=2, No such file or directory at java.lang.ProcessBuilder.start(ProcessBuilder.java:475) at hudson.Proc$LocalProc.<init>(Proc.java:244) at hudson.Proc$LocalProc.<init>(Proc.java:216) at hudson.Launcher$LocalLauncher.launch(Launcher.java:707) at hudson.Launcher$ProcStarter.start(Launcher.java:338) at hudson.maven.AbstractMavenProcessFactory.newProcess(AbstractMavenProcessFactory.java:223) at hudson.maven.ProcessCache.get(ProcessCache.java:231) at hudson.maven.MavenModuleSetBuild$RunnerImpl.doRun(MavenModuleSetBuild.java:698) at hudson.model.AbstractBuild$AbstractRunner.run(AbstractBuild.java:461) at hudson.model.Run.run(Run.java:1404) at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:470) at hudson.model.ResourceController.execute(ResourceController.java:88) at hudson.model.Executor.run(Executor.java:230) Caused by: java.io.IOException: java.io.IOException: error=2, No such file or directory at java.lang.UNIXProcess.<init>(UNIXProcess.java:164) at java.lang.ProcessImpl.start(ProcessImpl.java:81) at java.lang.ProcessBuilder.start(ProcessBuilder.java:468) ... 12 more -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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