See <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/42/changes>
Changes: [kono] Local properties are set for beta1 release. [kono] Version numbers in dependencies are set to beta3 for release. ------------------------------------------ [...truncated 15991 lines...] [INFO] [INFO] --- maven-bundle-plugin:2.3.4:bundle (default-bundle) @ welcome-impl --- ignoring exception during new ExecutedMojo null [INFO] [INFO] --- maven-source-plugin:2.1.2:jar (attach-sources) @ welcome-impl --- [INFO] Building jar: <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/welcome-impl/target/welcome-impl-3.0.0-beta1-SNAPSHOT-sources.jar> [INFO] [WARNING] JAR will be empty - no content was marked for inclusion! 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Implementation/modules/org.cytoscape$welcome-impl/builds/2012-10-01_17-05-41/archive/org.cytoscape/welcome-impl/3.0.0-beta1-20121001.221352-3/welcome-impl-3.0.0-beta1-20121001.221352-3.jar [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/welcome-impl/target/welcome-impl-3.0.0-beta1-SNAPSHOT-sources.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$welcome-impl/builds/2012-10-01_17-05-41/archive/org.cytoscape/welcome-impl/3.0.0-beta1-20121001.221352-3/welcome-impl-3.0.0-beta1-20121001.221352-3-sources.jar [JENKINS] Archiving <http://code.cytoscape.org/jenkins/job/Cytoscape%203%20Implementation/ws/trunk/welcome-impl/target/welcome-impl-3.0.0-beta1-SNAPSHOT-tests.jar> to /opt/tomcat-home/jenkins/jobs/Cytoscape 3 Implementation/modules/org.cytoscape$welcome-impl/builds/2012-10-01_17-05-41/archive/org.cytoscape/welcome-impl/3.0.0-beta1-20121001.221352-3/welcome-impl-3.0.0-beta1-20121001.221352-3-tests.jar [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape GUI Command Line Parser Impl (gui-cmdline-parser-impl) 3.0.0-beta1-SNAPSHOT [INFO] ------------------------------------------------------------------------ Downloading: http://code.cytoscape.org/nexus/content/repositories/releases/org/cytoscape/cy-commons-cli/3.0.0-beta1/cy-commons-cli-3.0.0-beta1.pom Downloading: http://code.cytoscape.org/nexus/content/repositories/thirdparty/org/cytoscape/cy-commons-cli/3.0.0-beta1/cy-commons-cli-3.0.0-beta1.pom Downloading: http://code.cytoscape.org/nexus/content/repositories/biopax-release/org/cytoscape/cy-commons-cli/3.0.0-beta1/cy-commons-cli-3.0.0-beta1.pom Downloading: http://code.cytoscape.org/nexus/content/repositories/ops4j-release/org/cytoscape/cy-commons-cli/3.0.0-beta1/cy-commons-cli-3.0.0-beta1.pom Downloading: 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Implementation/modules/org.cytoscape$gui-cmdline-parser-impl/builds/2012-10-01_17-05-41/archive/org.cytoscape/gui-cmdline-parser-impl/3.0.0-beta1-SNAPSHOT/gui-cmdline-parser-impl-3.0.0-beta1-SNAPSHOT.pom [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary: [INFO] [INFO] Cytoscape Implementation Parent Project POM ....... SUCCESS [4.590s] [INFO] Cytoscape BioPAX Impl (biopax-impl) ............... SUCCESS [5.316s] [INFO] Cytoscape Command Executor Impl (command-executor-impl) SUCCESS [3.419s] [INFO] Cytoscape Equations Impl (equations-impl) ......... SUCCESS [6.688s] [INFO] Cytoscape Model Impl Parent (model-impl-parent) ... SUCCESS [0.565s] [INFO] Cytoscape Model Impl (model-impl) ................. SUCCESS [8.761s] [INFO] Cytoscape View Model Impl Parent (viewmodel-impl-parent) SUCCESS [0.413s] [INFO] Cytoscape View Model Impl (viewmodel-impl) ........ SUCCESS [3.973s] [INFO] Cytoscape Ding Impl Parent (ding-impl) ............ SUCCESS [0.763s] [INFO] Cytoscape Ding View/Presentation Impl (ding-presentation-impl) SUCCESS [31.524s] [INFO] org.cytoscape.work-impl ........................... SUCCESS [3.503s] [INFO] Cytoscape Core Task Impl (core-task-impl) ......... SUCCESS [6.624s] [INFO] Cytoscape CPath2 Impl (cpath2-impl) ............... SUCCESS [6.716s] [INFO] Cytoscape Groups Impl (group-impl) ................ SUCCESS [8.681s] [INFO] Cytoscape IO Impl Parent (io-impl-parent) ......... SUCCESS [0.590s] [INFO] Cytoscape IO Impl (io-impl) ....................... SUCCESS [9.625s] [INFO] Cytoscape Event Impl Parent (event-impl-parent) ... SUCCESS [0.564s] [INFO] Cytoscape Event Impl (event-impl) ................. SUCCESS [9.929s] [INFO] Cytoscape Layout Impl (layout-impl) ............... SUCCESS [4.727s] [INFO] Cytoscape Ding View/Presentation Impl Performance (ding-impl-performance-debug) SUCCESS [11.419s] [INFO] Cytoscape Editor Impl (editor-impl) ............... SUCCESS [2.715s] [INFO] Cytoscape Equation Functions Impl (equations-functions-impl) SUCCESS [3.435s] [INFO] Cytoscape Filters Impl (filter-impl) .............. SUCCESS [4.017s] [INFO] Cytoscape GraphML Impl (graphml-impl) ............. SUCCESS [4.139s] [INFO] Cytoscape Group Data Impl (group-data-impl) ....... SUCCESS [3.585s] [INFO] Cytoscape Group View Impl (group-view-impl) ....... SUCCESS [3.779s] [INFO] Cytoscape IO Impl Performance (io-impl-performance) SUCCESS [10.897s] [INFO] Cytoscape Layout Algorithms Impl (layout-cytoscape-impl) SUCCESS [3.600s] [INFO] Cytoscape JGraph Layout Impl (layout-jgraph-impl) . SUCCESS [3.368s] [INFO] Cytoscape Prefuse Layout Impl (layout-prefuse-impl) SUCCESS [3.584s] [INFO] Cytoscape Linkout Impl (linkout-impl) ............. SUCCESS [3.067s] [INFO] Cytoscape Log Swing Impl (log-swing-impl) ......... SUCCESS [6.151s] [INFO] Cytoscape Manual Layout Impl (manual-layout-impl) . SUCCESS [3.634s] [INFO] Cytoscape Model Impl Performance Debug (model-impl-performance-debug) SUCCESS [5.193s] [INFO] Cytoscape Model Impl Table Performance Debug (model-impl-table-performance-debug) SUCCESS [5.430s] [INFO] Cytoscape NetworkAnalyzer Impl (network-analyzer-impl) SUCCESS [5.050s] [INFO] Cytoscape Merge Impl (network-merge-impl) ......... SUCCESS [3.179s] [INFO] Cytoscape App Impl (app-impl) ..................... SUCCESS [9.429s] [INFO] Cytoscape Presentation Impl (presentation-impl) ... SUCCESS [4.148s] [INFO] Cytoscape Property Impl (property-impl) ........... SUCCESS [3.164s] [INFO] Cytoscape PSI-MI Impl Parent (psi-mi-impl-parent) . SUCCESS [0.576s] [INFO] Cytoscape PSI-MI Impl (psi-mi-impl) ............... SUCCESS [9.360s] [INFO] Cytoscape PSI-MI Impl Performance (psi-mi-impl-performance) SUCCESS [23.142s] [INFO] Cytoscape SBML Impl (sbml-impl) ................... SUCCESS [5.010s] [INFO] Cytoscape Search Impl (search-impl) ............... SUCCESS [3.393s] [INFO] Cytoscape Session Impl Parent (session-impl-parent) SUCCESS [0.360s] [INFO] Cytoscape Session Impl (session-impl) ............. SUCCESS [5.318s] [INFO] Cytoscape Datasource Impl (datasource-impl) ....... SUCCESS [2.935s] [INFO] org.cytoscape.work-headless-impl .................. SUCCESS [3.149s] [INFO] Cytoscape VizMap Impl Parent (vizmap-impl-parent) . SUCCESS [0.660s] [INFO] Cytoscape VizMap Impl (vizmap-impl) ............... SUCCESS [6.022s] [INFO] Cytoscape Application Impl (application-impl) ..... SUCCESS [3.828s] [INFO] Cytoscape VizMap GUI Impl (vizmap-gui-impl) ....... SUCCESS [7.316s] [INFO] Cytoscape Work Swing Impl Parent (work-swing-impl-parent) SUCCESS [0.681s] [INFO] Cytoscape Work Swing Impl (work-swing-impl) ....... SUCCESS [5.300s] [INFO] Cytoscape Session Impl Integration Test (session-impl-integration-test) SUCCESS [38.565s] [INFO] Cytoscape Help Impl (help-impl) ................... SUCCESS [24.738s] [INFO] Cytoscape Swing Utility Impl (swing-util-impl) .... SUCCESS [3.979s] [INFO] Cytoscape Swing Application Impl (swing-application-impl) SUCCESS [7.549s] [INFO] Cytoscape Table Browser Impl (table-browser-impl) . SUCCESS [5.273s] [INFO] Cytoscape Table Import Impl (table-import-impl) ... SUCCESS [16.876s] [INFO] Cytoscape VizMap GUI Core Impl (vizmap-gui-core-impl) SUCCESS [2.511s] [INFO] Cytoscape Biomart Webservice Impl (webservice-biomart-client-impl) SUCCESS [4.728s] [INFO] Cytoscape Webservice Impl (webservice-impl) ....... SUCCESS [4.015s] [INFO] Cytoscape NCBI Webservice Impl (webservice-ncbi-client-impl) SUCCESS [5.436s] [INFO] Cytoscape PSIQUIC Web Service Impl (webservice-psicquic-client-impl) SUCCESS [5.457s] [INFO] Cytoscape BioGrid Datasource Impl (datasource-biogrid-impl) SUCCESS [10.303s] [INFO] Cytoscape Welcome Screen Impl (welcome-impl) ...... SUCCESS [3.696s] [INFO] Cytoscape GUI Command Line Parser Impl (gui-cmdline-parser-impl) FAILURE [6.051s] [INFO] Cytoscape Edge Bundler Impl (edge-bundler-impl) ... SKIPPED [INFO] Cytoscape Scripting Impl (scripting-impl) ......... SKIPPED [INFO] Cytoscape Headless Application Impl (headless-application-impl) SKIPPED [INFO] Cytoscape Headless Command Line Parser Impl (headless-cmdline-parser-impl) SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 8:16.155s [INFO] Finished at: Mon Oct 01 17:13:59 GMT-05:00 2012 [INFO] Final Memory: 287M/688M [INFO] ------------------------------------------------------------------------ mavenExecutionResult exceptions not empty message : Failed to execute goal on project gui-cmdline-parser-impl: Could not resolve dependencies for project org.cytoscape:gui-cmdline-parser-impl:bundle:3.0.0-beta1-SNAPSHOT: The following artifacts could not be resolved: org.cytoscape:cy-commons-cli:jar:3.0.0-beta1, org.cytoscape:cmdline:jar:3.0.0-beta1: Could not find artifact org.cytoscape:cy-commons-cli:jar:3.0.0-beta1 in cytoscape_releases (http://code.cytoscape.org/nexus/content/repositories/releases/) cause : Could not resolve dependencies for project org.cytoscape:gui-cmdline-parser-impl:bundle:3.0.0-beta1-SNAPSHOT: The following artifacts could not be resolved: org.cytoscape:cy-commons-cli:jar:3.0.0-beta1, org.cytoscape:cmdline:jar:3.0.0-beta1: Could not find artifact org.cytoscape:cy-commons-cli:jar:3.0.0-beta1 in cytoscape_releases (http://code.cytoscape.org/nexus/content/repositories/releases/) Stack trace : org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal on project gui-cmdline-parser-impl: Could not resolve dependencies for project org.cytoscape:gui-cmdline-parser-impl:bundle:3.0.0-beta1-SNAPSHOT: The following artifacts could not be resolved: org.cytoscape:cy-commons-cli:jar:3.0.0-beta1, org.cytoscape:cmdline:jar:3.0.0-beta1: Could not find artifact org.cytoscape:cy-commons-cli:jar:3.0.0-beta1 in cytoscape_releases (http://code.cytoscape.org/nexus/content/repositories/releases/) at org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.getDependencies(LifecycleDependencyResolver.java:196) at org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.resolveProjectDependencies(LifecycleDependencyResolver.java:108) at org.apache.maven.lifecycle.internal.MojoExecutor.ensureDependenciesAreResolved(MojoExecutor.java:258) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:201) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:153) at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:145) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:84) at org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject(LifecycleModuleBuilder.java:59) at org.apache.maven.lifecycle.internal.LifecycleStarter.singleThreadedBuild(LifecycleStarter.java:183) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:161) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:79) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:158) at hudson.maven.Maven3Builder.call(Maven3Builder.java:112) at hudson.maven.Maven3Builder.call(Maven3Builder.java:70) at hudson.remoting.UserRequest.perform(UserRequest.java:118) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:287) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:441) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303) at java.util.concurrent.FutureTask.run(FutureTask.java:138) at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) at java.lang.Thread.run(Thread.java:662) Caused by: org.apache.maven.project.DependencyResolutionException: Could not resolve dependencies for project org.cytoscape:gui-cmdline-parser-impl:bundle:3.0.0-beta1-SNAPSHOT: The following artifacts could not be resolved: org.cytoscape:cy-commons-cli:jar:3.0.0-beta1, org.cytoscape:cmdline:jar:3.0.0-beta1: Could not find artifact org.cytoscape:cy-commons-cli:jar:3.0.0-beta1 in cytoscape_releases (http://code.cytoscape.org/nexus/content/repositories/releases/) at org.apache.maven.project.DefaultProjectDependenciesResolver.resolve(DefaultProjectDependenciesResolver.java:170) at org.apache.maven.lifecycle.internal.LifecycleDependencyResolver.getDependencies(LifecycleDependencyResolver.java:171) ... 30 more Caused by: org.sonatype.aether.resolution.DependencyResolutionException: The following artifacts could not be resolved: org.cytoscape:cy-commons-cli:jar:3.0.0-beta1, org.cytoscape:cmdline:jar:3.0.0-beta1: Could not find artifact org.cytoscape:cy-commons-cli:jar:3.0.0-beta1 in cytoscape_releases (http://code.cytoscape.org/nexus/content/repositories/releases/) at org.sonatype.aether.impl.internal.DefaultRepositorySystem.resolveDependencies(DefaultRepositorySystem.java:412) at org.apache.maven.project.DefaultProjectDependenciesResolver.resolve(DefaultProjectDependenciesResolver.java:164) ... 31 more Caused by: org.sonatype.aether.resolution.ArtifactResolutionException: The following artifacts could not be resolved: org.cytoscape:cy-commons-cli:jar:3.0.0-beta1, org.cytoscape:cmdline:jar:3.0.0-beta1: Could not find artifact org.cytoscape:cy-commons-cli:jar:3.0.0-beta1 in cytoscape_releases (http://code.cytoscape.org/nexus/content/repositories/releases/) at org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolve(DefaultArtifactResolver.java:541) at org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolveArtifacts(DefaultArtifactResolver.java:220) at org.sonatype.aether.impl.internal.DefaultRepositorySystem.resolveDependencies(DefaultRepositorySystem.java:395) ... 32 more Caused by: org.sonatype.aether.transfer.ArtifactNotFoundException: Could not find artifact org.cytoscape:cy-commons-cli:jar:3.0.0-beta1 in cytoscape_releases (http://code.cytoscape.org/nexus/content/repositories/releases/) at org.sonatype.aether.connector.wagon.WagonRepositoryConnector$4.wrap(WagonRepositoryConnector.java:945) at org.sonatype.aether.connector.wagon.WagonRepositoryConnector$4.wrap(WagonRepositoryConnector.java:940) at org.sonatype.aether.connector.wagon.WagonRepositoryConnector$GetTask.flush(WagonRepositoryConnector.java:695) at org.sonatype.aether.connector.wagon.WagonRepositoryConnector$GetTask.flush(WagonRepositoryConnector.java:689) at org.sonatype.aether.connector.wagon.WagonRepositoryConnector.get(WagonRepositoryConnector.java:445) at org.sonatype.aether.impl.internal.DefaultArtifactResolver.resolve(DefaultArtifactResolver.java:460) ... 34 more Maven failed with error. Sending e-mails to: [email protected] Sending e-mails to: [email protected] channel stopped Skipping sonar analysis due to bad build status FAILURE -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
