Author: pwang
Date: 2013-02-28 15:58:41 -0800 (Thu, 28 Feb 2013)
New Revision: 31144
Modified:
csplugins/trunk/ucsd/kono/bingo-impl/src/main/java/bingo/internal/DisplayBiNGOWindow.java
Log:
Updated
Modified:
csplugins/trunk/ucsd/kono/bingo-impl/src/main/java/bingo/internal/DisplayBiNGOWindow.java
===================================================================
---
csplugins/trunk/ucsd/kono/bingo-impl/src/main/java/bingo/internal/DisplayBiNGOWindow.java
2013-02-28 23:14:23 UTC (rev 31143)
+++
csplugins/trunk/ucsd/kono/bingo-impl/src/main/java/bingo/internal/DisplayBiNGOWindow.java
2013-02-28 23:58:41 UTC (rev 31144)
@@ -302,7 +302,7 @@
final CyNetworkFactory networkFactory =
adapter.getCyNetworkFactory();
final CyNetwork network = networkFactory.createNetwork();
//network.getCyRow().set(CyNetwork.NAME, clusterName);
-
network.getDefaultNetworkTable().getRow(network).set(CyNetwork.NAME,
clusterName);
+
network.getDefaultNetworkTable().getRow(network.getSUID()).set(CyNetwork.NAME,
clusterName);
// CyNetwork network = Cytoscape.createNetwork(clusterName);
for (final Integer termID : set) {
@@ -349,7 +349,7 @@
if (node1 == null) {
node1 = network.addNode();
//node1.getCyRow().set(CyNetwork.NAME,
firstTermId);
-
network.getDefaultNodeTable().getRow(node1).set(CyNetwork.NAME, firstTermId);
+
network.getDefaultNodeTable().getRow(node1.getSUID()).set(CyNetwork.NAME,
firstTermId);
nodeMap.put(firstTermId, node1);
}
@@ -362,16 +362,16 @@
if (node2 == null) {
node2 = network.addNode();
//node2.getCyRow().set(CyNetwork.NAME,
secondTermId);
-
network.getDefaultNodeTable().getRow(node2).set(CyNetwork.NAME, secondTermId);
+
network.getDefaultNodeTable().getRow(node2.getSUID()).set(CyNetwork.NAME,
secondTermId);
nodeMap.put(secondTermId, node2);
}
final CyEdge edge = network.addEdge(node1,
node2, true);
//edge.getCyRow().set(CyEdge.INTERACTION, "pp");
-
network.getDefaultEdgeTable().getRow(edge).set(CyEdge.INTERACTION, "pp");
+
network.getDefaultEdgeTable().getRow(edge.getSUID()).set(CyEdge.INTERACTION,
"pp");
//edge.getCyRow().set(CyNetwork.NAME,
firstTermId + " (pp) " + secondTermId);
-
network.getDefaultEdgeTable().getRow(edge).set(CyNetwork.NAME, firstTermId + "
(pp) " + secondTermId);
+
network.getDefaultEdgeTable().getRow(edge.getSUID()).set(CyNetwork.NAME,
firstTermId + " (pp) " + secondTermId);
}
}
nodeMap.clear();
--
You received this message because you are subscribed to the Google Groups
"cytoscape-cvs" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to [email protected].
To post to this group, send email to [email protected].
Visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
For more options, visit https://groups.google.com/groups/opt_out.
