See <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/1081/changes>
Changes: [scooter] Addition of CyNetworkViewDesktopMgr. Fixes bug #2157 ------------------------------------------ [...truncated 11 lines...] INFO: --- maven-clean-plugin:2.4.1:clean (default-clean) @ swing-application-impl --- [INFO] Deleting <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target> Oct 19, 2013 5:01:04 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: Oct 19, 2013 5:01:04 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: --- maven-jaxb2-plugin:0.8.1:generate (sessionState) @ swing-application-impl --- [INFO] Started execution. [INFO] JAXB API is loaded from the [jar:file:/opt/jdk1.6.0_32/jre/lib/rt.jar!]. [INFO] Detected JAXB API version [2.1]. [INFO] pluginArtifacts:[org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:maven-plugin:0.8.1:, org.jvnet.jaxb2.maven2:maven-jaxb2-plugin-core:jar:0.8.1:compile, com.sun.org.apache.xml.internal:resolver:jar:20050927:compile, org.sonatype.plexus:plexus-build-api:jar:0.0.7:compile, junit:junit:jar:4.8.1:compile, org.jfrog.maven.annomojo:maven-plugin-anno:jar:1.3.1:compile, org.codehaus.plexus:plexus-utils:jar:1.5.15:compile, org.jvnet.jaxb2.maven2:maven-jaxb22-plugin:jar:0.8.1:compile, com.sun.xml.bind:jaxb-impl:jar:2.2.5-b10:compile, com.sun.xml.bind:jaxb-xjc:jar:2.2.5-b10:compile] [INFO] specVersion:2.1 [INFO] encoding:UTF-8 [INFO] schemaLanguage:null [INFO] schemaDirectory:<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/resources/xsd> [INFO] schemaIncludes:[sessionState.xsd] [INFO] schemaExcludes:null [INFO] schemas:[] [INFO] bindingDirectory:<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/resources/xsd> [INFO] bindingIncludes:[*.xjb] [INFO] bindingExcludes:null [INFO] bindings:[] [INFO] disableDefaultExcludes:false [INFO] catalog:null [INFO] catalogResolver:null [INFO] generatePackage:org.cytoscape.internal.io.sessionstate [INFO] generateDirectory:<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/generated-sources/xjc/sessionState> [INFO] readOnly:false [INFO] extension:false [INFO] strict:true [INFO] writeCode:true [INFO] verbose:true [INFO] debug:false [INFO] args:[] [INFO] forceRegenerate:false [INFO] removeOldOutput:false [INFO] produces:[**/*.*, **/*.java, **/bgm.ser, **/jaxb.properties] [INFO] otherDepends:null [INFO] episodeFile:<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/generated-sources/xjc/sessionState/META-INF/sun-jaxb.episode> [INFO] episode:true [INFO] classpathElements:[<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/classes]> [INFO] plugins:null [INFO] episodes:null [INFO] useDependenciesAsEpisodes:false [INFO] xjcPlugins:null [INFO] episodes:null [INFO] schemaFiles (calculated):[<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/resources/xsd/sessionState.xsd]> [INFO] bindingFiles (calculated):[] [INFO] xjcPluginArtifacts (resolved):[] [INFO] xjcPluginFiles (resolved):[] [INFO] xjcPluginURLs (resolved):[] [INFO] episodeArtifacts (resolved):[] [INFO] episodeFiles (resolved):[] [INFO] optionsConfiguration:OptionsConfiguration [specVersion=2.1 generateDirectory=<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/generated-sources/xjc/sessionState> generatePackage=org.cytoscape.internal.io.sessionstate schemaLanguage=null schemas=[<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/resources/xsd/sessionState.xsd]> bindings=[] plugins=[] catalogs=[] catalogResolver=org.jvnet.jaxb2.maven2.resolver.tools.MavenCatalogResolver@21ac58 readOnly=false extension=false strict=true verbose=true debugMode=false arguments=[-episode, <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/generated-sources/xjc/sessionState/META-INF/sun-jaxb.episode]]> Using java.util.ServiceLoader [INFO] File [<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/resources/xsd/sessionState.xsd]> was changed since the last build. [INFO] File [<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/pom.xml]> was changed since the last build. [INFO] Checking up-to-date depends [[<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/resources/xsd/sessionState.xsd,> <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/pom.xml]].> [INFO] Checking up-to-date produces [[]]. [INFO] Depends timestamp [1,382,219,631,000], produces timestamp [null]. [INFO] Parsing input schema(s)... [INFO] Compiling input schema(s)... [INFO] Writing output to [<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/generated-sources/xjc/sessionState].> [INFO] Cleaning package directories. [INFO] XJC writing: org/cytoscape/internal/io/sessionstate/Cytopanel.java [INFO] XJC writing: org/cytoscape/internal/io/sessionstate/Cytopanels.java [INFO] XJC writing: org/cytoscape/internal/io/sessionstate/NetworkFrame.java [INFO] XJC writing: org/cytoscape/internal/io/sessionstate/NetworkFrames.java [INFO] XJC writing: org/cytoscape/internal/io/sessionstate/ObjectFactory.java [INFO] XJC writing: org/cytoscape/internal/io/sessionstate/SessionState.java [INFO] Finished execution. Oct 19, 2013 5:01:04 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: Oct 19, 2013 5:01:04 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: --- maven-jaxb2-plugin:0.8.1:generate (networkList) @ swing-application-impl --- [INFO] Started execution. [INFO] JAXB API is loaded from the [jar:file:/opt/jdk1.6.0_32/jre/lib/rt.jar!]. [INFO] Detected JAXB API version [2.1]. [INFO] pluginArtifacts:[org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:maven-plugin:0.8.1:, org.jvnet.jaxb2.maven2:maven-jaxb2-plugin-core:jar:0.8.1:compile, com.sun.org.apache.xml.internal:resolver:jar:20050927:compile, org.sonatype.plexus:plexus-build-api:jar:0.0.7:compile, junit:junit:jar:4.8.1:compile, org.jfrog.maven.annomojo:maven-plugin-anno:jar:1.3.1:compile, org.codehaus.plexus:plexus-utils:jar:1.5.15:compile, org.jvnet.jaxb2.maven2:maven-jaxb22-plugin:jar:0.8.1:compile, com.sun.xml.bind:jaxb-impl:jar:2.2.5-b10:compile, com.sun.xml.bind:jaxb-xjc:jar:2.2.5-b10:compile] [INFO] specVersion:2.1 [INFO] encoding:UTF-8 [INFO] schemaLanguage:null [INFO] schemaDirectory:<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/resources/xsd> [INFO] schemaIncludes:[networkList.xsd] [INFO] schemaExcludes:null [INFO] schemas:[] [INFO] bindingDirectory:<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/resources/xsd> [INFO] bindingIncludes:[*.xjb] [INFO] bindingExcludes:null [INFO] bindings:[] [INFO] disableDefaultExcludes:false [INFO] catalog:null [INFO] catalogResolver:null [INFO] generatePackage:org.cytoscape.internal.io.networklist [INFO] generateDirectory:<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/generated-sources/xjc/networkList> [INFO] readOnly:false [INFO] extension:false [INFO] strict:true [INFO] writeCode:true [INFO] verbose:true [INFO] debug:false [INFO] args:[] [INFO] forceRegenerate:false [INFO] removeOldOutput:false [INFO] produces:[**/*.*, **/*.java, **/bgm.ser, **/jaxb.properties] [INFO] otherDepends:null [INFO] episodeFile:<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/generated-sources/xjc/networkList/META-INF/sun-jaxb.episode> [INFO] episode:true [INFO] classpathElements:[<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/classes]> [INFO] plugins:null [INFO] episodes:null [INFO] useDependenciesAsEpisodes:false [INFO] xjcPlugins:null [INFO] episodes:null [INFO] schemaFiles (calculated):[<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/resources/xsd/networkList.xsd]> [INFO] bindingFiles (calculated):[] [INFO] xjcPluginArtifacts (resolved):[] [INFO] xjcPluginFiles (resolved):[] [INFO] xjcPluginURLs (resolved):[] [INFO] episodeArtifacts (resolved):[] [INFO] episodeFiles (resolved):[] [INFO] optionsConfiguration:OptionsConfiguration [specVersion=2.1 generateDirectory=<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/generated-sources/xjc/networkList> generatePackage=org.cytoscape.internal.io.networklist schemaLanguage=null schemas=[<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/resources/xsd/networkList.xsd]> bindings=[] plugins=[] catalogs=[] catalogResolver=org.jvnet.jaxb2.maven2.resolver.tools.MavenCatalogResolver@1456fa8 readOnly=false extension=false strict=true verbose=true debugMode=false arguments=[-episode, <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/generated-sources/xjc/networkList/META-INF/sun-jaxb.episode]]> Using java.util.ServiceLoader [INFO] File [<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/resources/xsd/networkList.xsd]> was changed since the last build. [INFO] File [<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/pom.xml]> was changed since the last build. [INFO] Checking up-to-date depends [[<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/resources/xsd/networkList.xsd,> <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/pom.xml]].> [INFO] Checking up-to-date produces [[]]. [INFO] Depends timestamp [1,382,219,631,000], produces timestamp [null]. [INFO] Parsing input schema(s)... [INFO] Compiling input schema(s)... [INFO] Writing output to [<http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/generated-sources/xjc/networkList].> [INFO] Cleaning package directories. [INFO] XJC writing: org/cytoscape/internal/io/networklist/Network.java [INFO] XJC writing: org/cytoscape/internal/io/networklist/NetworkList.java [INFO] XJC writing: org/cytoscape/internal/io/networklist/ObjectFactory.java [INFO] Finished execution. Oct 19, 2013 5:01:04 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: Oct 19, 2013 5:01:04 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: --- maven-resources-plugin:2.6:resources (default-resources) @ swing-application-impl --- [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 163 resources [INFO] skip non existing resourceDirectory <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/help> [INFO] Copying 1 resource [INFO] Copying 1 resource Oct 19, 2013 5:01:05 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: Oct 19, 2013 5:01:05 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: --- maven-dependency-plugin:2.1:unpack (copy-javahelp) @ swing-application-impl --- [INFO] Configured Artifact: org.cytoscape:help-impl:javahelp:3.1.0-SNAPSHOT:zip [INFO] Unpacking /opt/tomcat-home/jenkins/jobs/cytoscape-3-impl/workspace/help-impl/target/help-impl-3.1.0-SNAPSHOT-javahelp.zip to <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/help/cytoscape/help> with includes null and excludes:null Oct 19, 2013 5:01:06 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: Oct 19, 2013 5:01:06 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: --- maven-compiler-plugin:2.5.1:compile (default-compile) @ swing-application-impl --- [INFO] Compiling 85 source files to <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/target/classes> [INFO] ------------------------------------------------------------- [ERROR] COMPILATION ERROR : [INFO] ------------------------------------------------------------- [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/help/ArrangeTask.java>:[28,69] package org.cytoscape.application.swing.CyNetworkViewDesktopMgr does not exist [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/help/ArrangeTask.java>:[30,62] package org.cytoscape.application.swing.CyNetworkViewDesktopMgr does not exist [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/help/ArrangeTask.java>:[37,9] cannot find symbol symbol : class ArrangeType location: class org.cytoscape.internal.view.help.ArrangeTask [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/CyDesktopManager.java>:[30,38] cannot find symbol symbol : class CyNetworkViewDesktopMgr location: package org.cytoscape.application.swing [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/CyDesktopManager.java>:[36,41] cannot find symbol symbol: class CyNetworkViewDesktopMgr public class CyDesktopManager implements CyNetworkViewDesktopMgr { [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/help/ArrangeTask.java>:[40,49] cannot find symbol symbol : class ArrangeType location: class org.cytoscape.internal.view.help.ArrangeTask [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/CyDesktopManager.java>:[81,28] cannot find symbol symbol : class ArrangeType location: class org.cytoscape.internal.view.CyDesktopManager [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/CyActivator.java>:[28,69] package org.cytoscape.application.swing.CyNetworkViewDesktopMgr does not exist [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/CyActivator.java>:[43,38] cannot find symbol symbol : class CyNetworkViewDesktopMgr location: package org.cytoscape.application.swing [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/help/ArrangeTaskFactory.java>:[28,62] package org.cytoscape.application.swing.CyNetworkViewDesktopMgr does not exist [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/help/ArrangeTaskFactory.java>:[37,9] cannot find symbol symbol : class ArrangeType location: class org.cytoscape.internal.view.help.ArrangeTaskFactory [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/help/ArrangeTaskFactory.java>:[39,50] cannot find symbol symbol : class ArrangeType location: class org.cytoscape.internal.view.help.ArrangeTaskFactory [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/CyDesktopManager.java>:[48,1] method does not override or implement a method from a supertype [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/CyDesktopManager.java>:[55,1] method does not override or implement a method from a supertype [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/CyDesktopManager.java>:[67,1] method does not override or implement a method from a supertype [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/CyDesktopManager.java>:[92,16] cannot find symbol symbol : variable ArrangeType location: class org.cytoscape.internal.view.CyDesktopManager [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/CyDesktopManager.java>:[177,21] cannot find symbol symbol : variable ArrangeType location: class org.cytoscape.internal.view.CyDesktopManager [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/CyDesktopManager.java>:[206,21] cannot find symbol symbol : variable ArrangeType location: class org.cytoscape.internal.view.CyDesktopManager [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/CyDesktopManager.java>:[233,21] cannot find symbol symbol : variable ArrangeType location: class org.cytoscape.internal.view.CyDesktopManager [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/view/CyDesktopManager.java>:[80,1] method does not override or implement a method from a supertype [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/CyActivator.java>:[287,87] cannot find symbol symbol : variable GRID location: class org.cytoscape.internal.CyActivator [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/CyActivator.java>:[289,72] cannot find symbol symbol : variable CASCADE location: class org.cytoscape.internal.CyActivator [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/CyActivator.java>:[291,75] cannot find symbol symbol : variable HORIZONTAL location: class org.cytoscape.internal.CyActivator [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/CyActivator.java>:[293,73] cannot find symbol symbol : variable VERTICAL location: class org.cytoscape.internal.CyActivator [ERROR] <http://code.cytoscape.org/jenkins/job/cytoscape-3-impl/org.cytoscape$swing-application-impl/ws/src/main/java/org/cytoscape/internal/CyActivator.java>:[331,40] cannot find symbol symbol : class CyNetworkViewDesktopMgr location: class org.cytoscape.internal.CyActivator [INFO] 25 errors [INFO] ------------------------------------------------------------- -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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