Branch: refs/heads/develop
Home: https://github.com/cytoscape/cytoscape-impl
Commit: 88444994c905458a0e3140b2b05a46f0fc71f821
https://github.com/cytoscape/cytoscape-impl/commit/88444994c905458a0e3140b2b05a46f0fc71f821
Author: David Welker <[email protected]>
Date: 2013-10-21 (Mon, 21 Oct 2013)
Changed paths:
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/BrowserTable.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/ValidatedObjectAndEditString.java
Log Message:
-----------
fixes #2178 Instead of maintaining a row sorter, ValidatedObjectAndEditString
is made comparable.
Commit: 0104f1d3311e26e30b14fcada2a81cb124f37297
https://github.com/cytoscape/cytoscape-impl/commit/0104f1d3311e26e30b14fcada2a81cb124f37297
Author: David <[email protected]>
Date: 2013-10-23 (Wed, 23 Oct 2013)
Changed paths:
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/ValidatedObjectAndEditString.java
Log Message:
-----------
fixes #2178 Further modifications. Use comparable instead of trying to cast
to a Double.
Commit: 651069a6b23e7faa118b5aa4562ec95de2cc7f8a
https://github.com/cytoscape/cytoscape-impl/commit/651069a6b23e7faa118b5aa4562ec95de2cc7f8a
Author: David <[email protected]>
Date: 2013-10-23 (Wed, 23 Oct 2013)
Changed paths:
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/BrowserTableModel.java
Log Message:
-----------
fixes #2178 Instead of maintaining a row sorter, ValidatedObjectAndEditString
is made comparable.
Commit: 1ef970b84bcbddeae2932741fa3f42c3613386e8
https://github.com/cytoscape/cytoscape-impl/commit/1ef970b84bcbddeae2932741fa3f42c3613386e8
Author: David <[email protected]>
Date: 2013-10-23 (Wed, 23 Oct 2013)
Changed paths:
M app-impl/src/main/java/org/cytoscape/app/internal/manager/App.java
M app-impl/src/main/java/org/cytoscape/app/internal/manager/AppParser.java
M
app-impl/src/main/java/org/cytoscape/app/internal/task/InstallAppFromAppStoreTask.java
M
app-impl/src/main/java/org/cytoscape/app/internal/task/InstallAppFromFileTask.java
M
application-impl/src/main/java/org/cytoscape/application/internal/ShutdownHandler.java
M biopax-impl/pom.xml
M biopax-impl/src/main/java/org/cytoscape/biopax/internal/BioPaxMapper.java
M biopax-impl/src/main/java/org/cytoscape/biopax/internal/BioPaxReader.java
M
biopax-impl/src/main/java/org/cytoscape/biopax/internal/BioPaxReaderTask.java
M biopax-impl/src/main/java/org/cytoscape/biopax/internal/CyActivator.java
M
biopax-impl/src/main/java/org/cytoscape/biopax/internal/util/VisualStyleUtil.java
R
biopax-impl/src/main/resources/org/cytoscape/biopax/internal/view/binary_legend.html
R
biopax-impl/src/main/resources/org/cytoscape/biopax/internal/view/glasses.gif
R biopax-impl/src/main/resources/org/cytoscape/biopax/internal/view/info.gif
R
biopax-impl/src/main/resources/org/cytoscape/biopax/internal/view/legend.gif
R
biopax-impl/src/main/resources/org/cytoscape/biopax/internal/view/legend.html
R
biopax-impl/src/main/resources/org/cytoscape/biopax/internal/view/legend.png
R
biopax-impl/src/main/resources/org/cytoscape/biopax/internal/view/read_obj.gif
M
command-dialog-impl/src/main/java/org/cytoscape/command-dialog/internal/CyActivator.java
M
command-dialog-impl/src/main/java/org/cytoscape/command-dialog/internal/tasks/QuitTask.java
M core-task-impl/src/main/java/org/cytoscape/task/internal/CyActivator.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/export/vizmap/VizmapWriter.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/loadvizmap/LoadVizmapFileTask.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/table/ImportDataTableTask.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/table/ImportDataTableTaskFactoryImpl.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/CyActivator.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InnerCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/TextAnnotationPanel.java
M filter2-impl/pom.xml
M filter2-impl/src/main/java/org/cytoscape/filter/internal/CyActivator.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/FilterCytoPanelComponent.java
M filter2-impl/src/main/java/org/cytoscape/filter/internal/ModelMonitor.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/attribute/AttributeFilterController.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/attribute/AttributeFilterView.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/attribute/AttributeFilterViewFactory.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/composite/CompositeFilterPanel.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/degree/DegreeFilter.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/degree/DegreeFilterController.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/degree/DegreeFilterViewFactory.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/prefuse/JRangeSliderExtended.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/prefuse/NumberRangeModel.java
A
filter2-impl/src/main/java/org/cytoscape/filter/internal/topology/TopologyFilter.java
A
filter2-impl/src/main/java/org/cytoscape/filter/internal/topology/TopologyFilterController.java
A
filter2-impl/src/main/java/org/cytoscape/filter/internal/topology/TopologyFilterFactory.java
A
filter2-impl/src/main/java/org/cytoscape/filter/internal/topology/TopologyFilterView.java
A
filter2-impl/src/main/java/org/cytoscape/filter/internal/topology/TopologyFilterViewFactory.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/view/FilterPanel.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/view/FilterPanelController.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/view/FilterViewModel.java
A
filter2-impl/src/main/java/org/cytoscape/filter/internal/view/IconManager.java
A
filter2-impl/src/main/java/org/cytoscape/filter/internal/view/IconManagerImpl.java
A
filter2-impl/src/main/java/org/cytoscape/filter/internal/view/RangeChooser.java
A
filter2-impl/src/main/java/org/cytoscape/filter/internal/view/RangeChooserController.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/view/TransformerViewManager.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/view/ViewUpdater.java
A
filter2-impl/src/main/java/org/cytoscape/filter/internal/view/ViewUtil.java
A filter2-impl/src/main/resources/fonts/fontawesome-webfont.ttf
M filter2-impl/src/test/java/org/cytoscape/filter/internal/UiScaffold.java
M group-impl/src/main/java/org/cytoscape/group/internal/CyGroupImpl.java
M
group-view-impl/src/main/java/org/cytoscape/group/view/internal/GroupViewCollapseHandler.java
M json-impl/src/main/java/org/cytoscape/io/internal/CyActivator.java
A
json-impl/src/main/java/org/cytoscape/io/internal/write/json/CytoscapeJsVisualStyleWriter.java
A
json-impl/src/main/java/org/cytoscape/io/internal/write/json/CytoscapeJsVisualStyleWriterFactory.java
R
json-impl/src/main/java/org/cytoscape/io/internal/write/json/JSONVisualStyleWriter.java
R
json-impl/src/main/java/org/cytoscape/io/internal/write/json/JSONVisualStyleWriterFactory.java
M
json-impl/src/main/java/org/cytoscape/io/internal/write/json/serializer/CytoscapeJsStyleConverter.java
M
json-impl/src/main/java/org/cytoscape/io/internal/write/json/serializer/CytoscapeJsVisualStyleSerializer.java
M
json-impl/src/test/java/org/cytoscape/io/internal/write/json/CytoscapeJsVisualStyleSerializerTest.java
M json-impl/src/test/resources/site/.idea/workspace.xml
M json-impl/src/test/resources/site/app/data/vs1.json
M swing-application-impl/pom.xml
M
swing-application-impl/src/main/java/org/cytoscape/internal/CyActivator.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/SessionHandler.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CyDesktopManager.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoPanelImp.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeDesktop.java
A
swing-application-impl/src/main/java/org/cytoscape/internal/view/IconManager.java
A
swing-application-impl/src/main/java/org/cytoscape/internal/view/IconManagerImpl.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkPanel.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/help/ArrangeTask.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/help/ArrangeTaskFactory.java
A swing-application-impl/src/main/resources/fonts/fontawesome-webfont.ttf
A
swing-application-impl/src/test/java/org/cytoscape/internal/view/CytoscapeDesktopTest.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/AttributeBrowserToolBar.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/CyActivator.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/DefaultTableBrowser.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/GlobalTableBrowser.java
A
table-browser-impl/src/main/java/org/cytoscape/browser/internal/IconManager.java
A
table-browser-impl/src/main/java/org/cytoscape/browser/internal/IconManagerImpl.java
A table-browser-impl/src/main/resources/fonts/fontawesome-webfont.ttf
A table-browser-impl/src/main/resources/fonts/jsMath-cmti10.ttf
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/CyActivator.java
A
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ImportNoGuiNetworkReaderFactory.java
A
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ImportNoGuiTableReaderFactory.java
A
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/LoadNetworkReaderTask.java
A
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/LoadNoGuiTableReaderFactory.java
A
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/LoadTableReaderTask.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/NetworkCollectionHelper.java
A
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/SelectFileTableTask.java
A
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/SelectURLTableTask.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/CyActivator.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/controller/StartupCommand.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/event/CellEditorEventHandler.java
A
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/model/PropsProxy.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/model/VizMapperProxy.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/util/NotificationNames.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/util/VisualPropertyUtil.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/VisualPropertySheet.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/VisualPropertySheetItem.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/VizMapPropertyBuilder.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/VizMapperMainPanel.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/VizMapperMediator.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/ContinuousMappingEditorPanel.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/propertyeditor/CyColorPropertyEditor.java
A vizmap-gui-impl/src/main/resources/vizmapper.props
M
work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/task/JDialogTaskManager.java
M
work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/task/TaskManagerImpl.java
M
work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/tunables/JDialogTunableMutator.java
Log Message:
-----------
Merge branch 'develop' of github.com:cytoscape/cytoscape-impl into develop
Commit: a4e4f55c9669860b2a814703e761d46d8679bb12
https://github.com/cytoscape/cytoscape-impl/commit/a4e4f55c9669860b2a814703e761d46d8679bb12
Author: David <[email protected]>
Date: 2013-10-23 (Wed, 23 Oct 2013)
Changed paths:
M
welcome-impl/src/main/java/org/cytoscape/welcome/internal/panel/NewsAndLinkPanel.java
M
welcome-impl/src/main/java/org/cytoscape/welcome/internal/panel/StatusPanel.java
Log Message:
-----------
fixes #2184 Chianti is now checked for news and an appropriate message is
displayed if you are offline.
Commit: c7e271a6797cbe8a0797d09559664ffb30d9b7a9
https://github.com/cytoscape/cytoscape-impl/commit/c7e271a6797cbe8a0797d09559664ffb30d9b7a9
Author: David <[email protected]>
Date: 2013-10-24 (Thu, 24 Oct 2013)
Changed paths:
M app-impl/pom.xml
M app-impl/src/main/java/org/cytoscape/app/internal/CyActivator.java
A
app-impl/src/main/java/org/cytoscape/app/internal/event/AppStatusChangedListener.java
M app-impl/src/main/java/org/cytoscape/app/internal/manager/App.java
M app-impl/src/main/java/org/cytoscape/app/internal/manager/AppManager.java
A
app-impl/src/main/java/org/cytoscape/app/internal/manager/StartupMonitor.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/event/CellEditorEventHandler.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/util/NumberConverter.java
Log Message:
-----------
Merge branch 'develop' of github.com:cytoscape/cytoscape-impl into develop
Compare:
https://github.com/cytoscape/cytoscape-impl/compare/b907fdb34145...c7e271a6797c
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