See <http://code.cytoscape.org/jenkins/job/cytoscape-2-application/414/>
------------------------------------------ [...truncated 12093 lines...] [INFO] META-INF/sun-jaxb.episode already added, skipping [INFO] META-INF/sun-jaxb.episode already added, skipping [INFO] META-INF/sun-jaxb.episode already added, skipping [INFO] Building jar: <http://code.cytoscape.org/jenkins/job/cytoscape-2-application/ws/coreplugins/cPath2/target/cpath2-2.8.4-SNAPSHOT-sources.jar> [INFO] org already added, skipping [INFO] org/cytoscape already added, skipping [INFO] org/cytoscape/coreplugin already added, skipping [INFO] org/cytoscape/coreplugin/cpath2 already added, skipping [INFO] org already added, skipping [INFO] org/cytoscape already added, skipping [INFO] org/cytoscape/coreplugin already added, skipping [INFO] org/cytoscape/coreplugin/cpath2 already added, skipping [INFO] org/cytoscape/coreplugin/cpath2/view already added, skipping [INFO] org/cytoscape/coreplugin/cpath2/plugin already added, skipping [INFO] META-INF/sun-jaxb.episode already added, skipping [INFO] META-INF/sun-jaxb.episode already added, skipping [INFO] META-INF/sun-jaxb.episode already added, skipping [INFO] META-INF/sun-jaxb.episode already added, skipping Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: --- maven-assembly-plugin:2.2-beta-5:single (make-assembly) @ cpath2 --- [INFO] META-INF/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] org/ already added, skipping [INFO] org/apache/ already added, skipping [INFO] org/apache/commons/ already added, skipping [INFO] META-INF/LICENSE.txt already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] org/ already added, skipping [INFO] org/apache/ already added, skipping [INFO] org/apache/commons/ already added, skipping [INFO] META-INF/LICENSE.txt already added, skipping [INFO] META-INF/NOTICE.txt already added, skipping [INFO] Building jar: <http://code.cytoscape.org/jenkins/job/cytoscape-2-application/ws/coreplugins/cPath2/target/cpath2-2.8.4-SNAPSHOT-jar-with-dependencies.jar> [INFO] META-INF/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] org/ already added, skipping [INFO] org/apache/ already added, skipping [INFO] org/apache/commons/ already added, skipping [INFO] META-INF/LICENSE.txt already added, skipping [INFO] META-INF/ already added, skipping [INFO] META-INF/MANIFEST.MF already added, skipping [INFO] org/ already added, skipping [INFO] org/apache/ already added, skipping [INFO] org/apache/commons/ already added, skipping [INFO] META-INF/LICENSE.txt already added, skipping [INFO] META-INF/NOTICE.txt already added, skipping Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: --- maven-install-plugin:2.3.1:install (default-install) @ cpath2 --- [INFO] Installing <http://code.cytoscape.org/jenkins/job/cytoscape-2-application/ws/coreplugins/cPath2/target/cpath2-2.8.4-SNAPSHOT.jar> to /opt/tomcat-home/.m2/repository/cytoscape/coreplugins/cpath2/2.8.4-SNAPSHOT/cpath2-2.8.4-SNAPSHOT.jar [INFO] Installing <http://code.cytoscape.org/jenkins/job/cytoscape-2-application/ws/coreplugins/cPath2/pom.xml> to /opt/tomcat-home/.m2/repository/cytoscape/coreplugins/cpath2/2.8.4-SNAPSHOT/cpath2-2.8.4-SNAPSHOT.pom [INFO] Installing <http://code.cytoscape.org/jenkins/job/cytoscape-2-application/ws/coreplugins/cPath2/target/cpath2-2.8.4-SNAPSHOT-javadoc.jar> to /opt/tomcat-home/.m2/repository/cytoscape/coreplugins/cpath2/2.8.4-SNAPSHOT/cpath2-2.8.4-SNAPSHOT-javadoc.jar [INFO] Installing <http://code.cytoscape.org/jenkins/job/cytoscape-2-application/ws/coreplugins/cPath2/target/cpath2-2.8.4-SNAPSHOT-sources.jar> to /opt/tomcat-home/.m2/repository/cytoscape/coreplugins/cpath2/2.8.4-SNAPSHOT/cpath2-2.8.4-SNAPSHOT-sources.jar [INFO] Installing <http://code.cytoscape.org/jenkins/job/cytoscape-2-application/ws/coreplugins/cPath2/target/cpath2-2.8.4-SNAPSHOT-jar-with-dependencies.jar> to /opt/tomcat-home/.m2/repository/cytoscape/coreplugins/cpath2/2.8.4-SNAPSHOT/cpath2-2.8.4-SNAPSHOT-jar-with-dependencies.jar Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted INFO: --- maven-deploy-plugin:2.5:deploy (default-deploy) @ cpath2 --- Downloading: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/cpath2/2.8.4-SNAPSHOT/maven-metadata.xml [WARNING] Could not transfer metadata cytoscape.coreplugins:cpath2:2.8.4-SNAPSHOT/maven-metadata.xml from/to snapshots (http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots): Error transferring file: Server returned HTTP response code: 500 for URL: http://cytoscape.wodaklab.org/nexus/content/repositories/snapshots/cytoscape/coreplugins/cpath2/2.8.4-SNAPSHOT/maven-metadata.xml Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: ------------------------------------------------------------------------ Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Reactor Summary: Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Cytoscape Parent POM .............................. SUCCESS [13.758s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Cytoscape Core Libraries Parent POM ............... SUCCESS [0.947s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: commons-cli-1-x-cytocape-custom ................... SUCCESS [13.554s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: equations ......................................... SUCCESS [13.896s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: util-intr ......................................... SUCCESS [9.311s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: geom-spacial ...................................... SUCCESS [3.896s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: geom-rtree ........................................ SUCCESS [5.721s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: GINY API .......................................... SUCCESS [8.017s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: graph-fixed ....................................... SUCCESS [3.812s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: graph-dynamic ..................................... SUCCESS [10.637s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: nerius-math-xform ................................. SUCCESS [4.856s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: obo ............................................... SUCCESS [4.490s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: phoebe-dnd ........................................ SUCCESS [4.631s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: render-immed ...................................... SUCCESS [52.491s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: render-export ..................................... SUCCESS [3.635s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: render-stateful ................................... SUCCESS [7.051s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: task .............................................. SUCCESS [8.442s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: undo-support ...................................... SUCCESS [7.306s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: fing .............................................. SUCCESS [7.658s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: ding .............................................. SUCCESS [19.530s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Cytoscape Documentation ........................... SUCCESS [30.508s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Cytoscape Application ............................. SUCCESS [2:36.240s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Cytoscape Core Plugins Parent POM ................. SUCCESS [1.000s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Advanced Network Merge ............................ SUCCESS [13.540s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Automatic Layout .................................. SUCCESS [24.673s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: BioMart Client .................................... SUCCESS [10.839s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: BioPAX ............................................ SUCCESS [17.362s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Editor ............................................ SUCCESS [12.142s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Equation Functions ................................ SUCCESS [7.567s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Manual Layout ..................................... SUCCESS [13.566s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: NCBI Client ....................................... SUCCESS [20.163s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: PSI-MI ............................................ SUCCESS [18.245s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: QuickFind ......................................... SUCCESS [17.763s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: RFilters .......................................... SUCCESS [16.402s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: SBML Reader ....................................... SUCCESS [7.903s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Table Import ...................................... SUCCESS [30.428s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Attribute Browser ................................. SUCCESS [18.590s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: cPath ............................................. SUCCESS [11.994s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Pathway Commons plugin ............................ FAILURE [18.618s] Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Filters ........................................... SKIPPED Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Linkout ........................................... SKIPPED Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Core Commands Plugin .............................. SKIPPED Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: NetworkAnalyzer ................................... SKIPPED Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary INFO: Cytoscape Distribution ............................ SKIPPED Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logResult INFO: ------------------------------------------------------------------------ Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logResult INFO: BUILD FAILURE Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logStats INFO: ------------------------------------------------------------------------ Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logStats INFO: Total time: 10:53.075s Mar 7, 2014 5:03:38 AM org.apache.maven.cli.event.ExecutionEventLogger logStats INFO: Finished at: Fri Mar 07 05:03:38 GMT-05:00 2014 Mar 7, 2014 5:03:39 AM org.apache.maven.cli.event.ExecutionEventLogger logStats INFO: Final Memory: 98M/308M Mar 7, 2014 5:03:39 AM org.apache.maven.cli.event.ExecutionEventLogger sessionEnded INFO: ------------------------------------------------------------------------ java.lang.reflect.InvocationTargetException at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.codehaus.plexus.classworlds.launcher.Launcher.launchStandard(Launcher.java:329) at org.codehaus.plexus.classworlds.launcher.Launcher.launch(Launcher.java:239) at org.jvnet.hudson.maven3.agent.Maven3Main.launch(Maven3Main.java:178) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at hudson.maven.Maven3Builder.call(Maven3Builder.java:130) at hudson.maven.Maven3Builder.call(Maven3Builder.java:67) at hudson.remoting.UserRequest.perform(UserRequest.java:118) at hudson.remoting.UserRequest.perform(UserRequest.java:48) at hudson.remoting.Request$2.run(Request.java:326) at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303) at java.util.concurrent.FutureTask.run(FutureTask.java:138) at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) at java.lang.Thread.run(Thread.java:662) Caused by: java.lang.NoClassDefFoundError: com/jcraft/jzlib/GZIPInputStream at hudson.maven.reporters.MavenArtifact.<clinit>(MavenArtifact.java:74) at hudson.maven.reporters.MavenArtifactArchiver.postBuild(MavenArtifactArchiver.java:100) at hudson.maven.Maven3Builder$MavenExecutionListener.sessionEnded(Maven3Builder.java:463) at org.apache.maven.lifecycle.internal.DefaultExecutionEventCatapult.fire(DefaultExecutionEventCatapult.java:64) at org.apache.maven.lifecycle.internal.DefaultExecutionEventCatapult.fire(DefaultExecutionEventCatapult.java:42) at org.apache.maven.lifecycle.internal.LifecycleStarter.execute(LifecycleStarter.java:170) at org.apache.maven.DefaultMaven.doExecute(DefaultMaven.java:319) at org.apache.maven.DefaultMaven.execute(DefaultMaven.java:156) at org.jvnet.hudson.maven3.launcher.Maven3Launcher.main(Maven3Launcher.java:117) ... 22 more Caused by: java.lang.ClassNotFoundException at hudson.remoting.RemoteClassLoader$ClassLoaderProxy.fetch4(RemoteClassLoader.java:758) at hudson.remoting.RemoteClassLoader$ClassLoaderProxy.fetch3(RemoteClassLoader.java:763) at sun.reflect.GeneratedMethodAccessor63.invoke(Unknown Source) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:622) at hudson.remoting.RemoteInvocationHandler$RPCRequest.perform(RemoteInvocationHandler.java:299) at hudson.remoting.Request$2.run(Request.java:326) at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:72) at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334) at java.util.concurrent.FutureTask.run(FutureTask.java:166) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1146) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) at java.lang.Thread.run(Thread.java:701) ERROR: Processing failed due to a bug in the code. Please report this to [email protected] java.lang.NullPointerException at java.io.FileInputStream.<init>(FileInputStream.java:133) at org.apache.commons.io.output.DeferredFileOutputStream.writeTo(DeferredFileOutputStream.java:261) at hudson.maven.SplittableBuildListener.setSideOutputStream(SplittableBuildListener.java:159) at hudson.maven.MavenBuild$ProxyImpl2.appendLastLog(MavenBuild.java:532) at hudson.maven.AbstractMavenBuilder.end(AbstractMavenBuilder.java:104) at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:816) at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:567) at hudson.model.Run.execute(Run.java:1603) at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:506) at hudson.model.ResourceController.execute(ResourceController.java:88) at hudson.model.Executor.run(Executor.java:246) project=hudson.maven.MavenModuleSet@1e7838f[cytoscape-2-application] project.getModules()=[hudson.maven.MavenModule@9b9b3f[cytoscape-2-application/cytoscape:application][cytoscape-2-application/cytoscape:application][relativePath:application], hudson.maven.MavenModule@1ed728b[cytoscape-2-application/cytoscape:cytoscape][cytoscape-2-application/cytoscape:cytoscape][relativePath:distribution], hudson.maven.MavenModule@1fb2cab[cytoscape-2-application/cytoscape:parent][cytoscape-2-application/cytoscape:parent][relativePath:], hudson.maven.MavenModule@131c6f6[cytoscape-2-application/cytoscape.corelibs:commons-cli-1-x-cytocape-custom][cytoscape-2-application/cytoscape.corelibs:commons-cli-1-x-cytocape-custom][relativePath:corelibs/commons-cli-1.x-cytocape-custom], hudson.maven.MavenModule@fd4324[cytoscape-2-application/cytoscape.corelibs:ding][cytoscape-2-application/cytoscape.corelibs:ding][relativePath:corelibs/ding], hudson.maven.MavenModule@a5b7ec[cytoscape-2-application/cytoscape.corelibs:docs][cytoscape-2-application/cytoscape.corelibs:docs][relativePath:corelibs/docs], hudson.maven.MavenModule@1ce1365[cytoscape-2-application/cytoscape.corelibs:equations][cytoscape-2-application/cytoscape.corelibs:equations][relativePath:corelibs/equations], hudson.maven.MavenModule@5b591f[cytoscape-2-application/cytoscape.corelibs:fing][cytoscape-2-application/cytoscape.corelibs:fing][relativePath:corelibs/fing], hudson.maven.MavenModule@13816ec[cytoscape-2-application/cytoscape.corelibs:geom-rtree][cytoscape-2-application/cytoscape.corelibs:geom-rtree][relativePath:corelibs/geom.rtree], hudson.maven.MavenModule@168e2a1[cytoscape-2-application/cytoscape.corelibs:geom-spacial][cytoscape-2-application/cytoscape.corelibs:geom-spacial][relativePath:corelibs/geom.spacial], hudson.maven.MavenModule@f6cb37[cytoscape-2-application/cytoscape.corelibs:giny][cytoscape-2-application/cytoscape.corelibs:giny][relativePath:corelibs/giny], hudson.maven.MavenModule@978c7a[cytoscape-2-application/cytoscape.corelibs:graph-dynamic][cytoscape-2-application/cytoscape.corelibs:graph-dynamic][relativePath:corelibs/graph.dynamic], hudson.maven.MavenModule@1879eea[cytoscape-2-application/cytoscape.corelibs:graph-fixed][cytoscape-2-application/cytoscape.corelibs:graph-fixed][relativePath:corelibs/graph.fixed], hudson.maven.MavenModule@d22af9[cytoscape-2-application/cytoscape.corelibs:nerius-math-xform][cytoscape-2-application/cytoscape.corelibs:nerius-math-xform][relativePath:corelibs/nerius.math.xform], hudson.maven.MavenModule@36cf0[cytoscape-2-application/cytoscape.corelibs:obo][cytoscape-2-application/cytoscape.corelibs:obo][relativePath:corelibs/obo], hudson.maven.MavenModule@e51a36[cytoscape-2-application/cytoscape.corelibs:parent][cytoscape-2-application/cytoscape.corelibs:parent][relativePath:corelibs], hudson.maven.MavenModule@11c104f[cytoscape-2-application/cytoscape.corelibs:phoebe-dnd][cytoscape-2-application/cytoscape.corelibs:phoebe-dnd][relativePath:corelibs/phoebe.dnd], hudson.maven.MavenModule@172ed93[cytoscape-2-application/cytoscape.corelibs:render-export][cytoscape-2-application/cytoscape.corelibs:render-export][relativePath:corelibs/render.export], hudson.maven.MavenModule@4b6a55[cytoscape-2-application/cytoscape.corelibs:render-immed][cytoscape-2-application/cytoscape.corelibs:render-immed][relativePath:corelibs/render.immed], hudson.maven.MavenModule@13220c3[cytoscape-2-application/cytoscape.corelibs:render-stateful][cytoscape-2-application/cytoscape.corelibs:render-stateful][relativePath:corelibs/render.stateful], hudson.maven.MavenModule@4e8f9[cytoscape-2-application/cytoscape.corelibs:task][cytoscape-2-application/cytoscape.corelibs:task][relativePath:corelibs/task], hudson.maven.MavenModule@5b5f8d[cytoscape-2-application/cytoscape.corelibs:undo-support][cytoscape-2-application/cytoscape.corelibs:undo-support][relativePath:corelibs/undo.support], hudson.maven.MavenModule@de5159[cytoscape-2-application/cytoscape.corelibs:util-intr][cytoscape-2-application/cytoscape.corelibs:util-intr][relativePath:corelibs/util.intr], hudson.maven.MavenModule@1aee4f9[cytoscape-2-application/cytoscape.coreplugins:advanced-network-merge][cytoscape-2-application/cytoscape.coreplugins:advanced-network-merge][relativePath:coreplugins/AdvancedNetworkMerge], hudson.maven.MavenModule@13ac989[cytoscape-2-application/cytoscape.coreplugins:attribute-browser][cytoscape-2-application/cytoscape.coreplugins:attribute-browser][relativePath:coreplugins/browser], hudson.maven.MavenModule@85526a[cytoscape-2-application/cytoscape.coreplugins:automatic-layout][cytoscape-2-application/cytoscape.coreplugins:automatic-layout][relativePath:coreplugins/AutomaticLayout], hudson.maven.MavenModule@e5bac0[cytoscape-2-application/cytoscape.coreplugins:biomart-client][cytoscape-2-application/cytoscape.coreplugins:biomart-client][relativePath:coreplugins/BioMartClient], hudson.maven.MavenModule@47a733[cytoscape-2-application/cytoscape.coreplugins:biopax][cytoscape-2-application/cytoscape.coreplugins:biopax][relativePath:coreplugins/BioPAX], hudson.maven.MavenModule@322015[cytoscape-2-application/cytoscape.coreplugins:core-commands][cytoscape-2-application/cytoscape.coreplugins:core-commands][relativePath:coreplugins/CoreCommands], hudson.maven.MavenModule@d869c7[cytoscape-2-application/cytoscape.coreplugins:cpath][cytoscape-2-application/cytoscape.coreplugins:cpath][relativePath:coreplugins/cPath], hudson.maven.MavenModule@8c0ab[cytoscape-2-application/cytoscape.coreplugins:cpath2][cytoscape-2-application/cytoscape.coreplugins:cpath2][relativePath:coreplugins/cPath2], hudson.maven.MavenModule@a13c6b[cytoscape-2-application/cytoscape.coreplugins:editor][cytoscape-2-application/cytoscape.coreplugins:editor][relativePath:coreplugins/CytoscapeEditor2], hudson.maven.MavenModule@185bc1a[cytoscape-2-application/cytoscape.coreplugins:equation-functions][cytoscape-2-application/cytoscape.coreplugins:equation-functions][relativePath:coreplugins/EquationFunctions], hudson.maven.MavenModule@1008722[cytoscape-2-application/cytoscape.coreplugins:filters][cytoscape-2-application/cytoscape.coreplugins:filters][relativePath:coreplugins/filters], hudson.maven.MavenModule@1a7fe02[cytoscape-2-application/cytoscape.coreplugins:linkout][cytoscape-2-application/cytoscape.coreplugins:linkout][relativePath:coreplugins/linkout], hudson.maven.MavenModule@156036[cytoscape-2-application/cytoscape.coreplugins:manual-layout][cytoscape-2-application/cytoscape.coreplugins:manual-layout][relativePath:coreplugins/ManualLayout], hudson.maven.MavenModule@15f9704[cytoscape-2-application/cytoscape.coreplugins:ncbi-client][cytoscape-2-application/cytoscape.coreplugins:ncbi-client][relativePath:coreplugins/NCBIClient], hudson.maven.MavenModule@b3b158[cytoscape-2-application/cytoscape.coreplugins:network-analyzer][cytoscape-2-application/cytoscape.coreplugins:network-analyzer][relativePath:coreplugins/NetworkAnalyzer], hudson.maven.MavenModule@14036ed[cytoscape-2-application/cytoscape.coreplugins:parent][cytoscape-2-application/cytoscape.coreplugins:parent][relativePath:coreplugins], hudson.maven.MavenModule@d62833[cytoscape-2-application/cytoscape.coreplugins:psi-mi][cytoscape-2-application/cytoscape.coreplugins:psi-mi][relativePath:coreplugins/PSI-MI], hudson.maven.MavenModule@1e95ffd[cytoscape-2-application/cytoscape.coreplugins:quickfind][cytoscape-2-application/cytoscape.coreplugins:quickfind][relativePath:coreplugins/QuickFind], hudson.maven.MavenModule@9cef83[cytoscape-2-application/cytoscape.coreplugins:rfilters][cytoscape-2-application/cytoscape.coreplugins:rfilters][relativePath:coreplugins/RFilters], hudson.maven.MavenModule@130a7ba[cytoscape-2-application/cytoscape.coreplugins:sbml-reader][cytoscape-2-application/cytoscape.coreplugins:sbml-reader][relativePath:coreplugins/SBMLReader], hudson.maven.MavenModule@153a6ff[cytoscape-2-application/cytoscape.coreplugins:table-import][cytoscape-2-application/cytoscape.coreplugins:table-import][relativePath:coreplugins/TableImport]] project.getRootModule()=hudson.maven.MavenModule@1fb2cab[cytoscape-2-application/cytoscape:parent][cytoscape-2-application/cytoscape:parent][relativePath:] FATAL: null java.lang.NullPointerException at java.io.FileInputStream.<init>(FileInputStream.java:133) at org.apache.commons.io.output.DeferredFileOutputStream.writeTo(DeferredFileOutputStream.java:261) at hudson.maven.SplittableBuildListener.setSideOutputStream(SplittableBuildListener.java:159) at hudson.maven.MavenBuild$ProxyImpl2.appendLastLog(MavenBuild.java:532) at hudson.maven.AbstractMavenBuilder.end(AbstractMavenBuilder.java:104) at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:816) at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:567) at hudson.model.Run.execute(Run.java:1603) at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:506) at hudson.model.ResourceController.execute(ResourceController.java:88) at hudson.model.Executor.run(Executor.java:246) -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. 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