See <http://code.cytoscape.org/jenkins/job/coreapp-biopax/org.cytoscape$biopax/140/>
------------------------------------------ Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512M; support was removed in 8.0 <===[JENKINS REMOTING CAPACITY]===> channel started log4j:WARN No appenders could be found for logger (org.apache.commons.beanutils.converters.BooleanConverter). log4j:WARN Please initialize the log4j system properly. Executing Maven: -B -f <http://code.cytoscape.org/jenkins/job/coreapp-biopax/org.cytoscape$biopax/ws/pom.xml> clean deploy [INFO] Scanning for projects... [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Building BioPAX Reader 3.4.0-SNAPSHOT [INFO] ------------------------------------------------------------------------ Downloading: http://code.cytoscape.org/nexus/content/repositories/snapshots/org/biopax/paxtools/paxtools-core/5.0.0-SNAPSHOT/maven-metadata.xml Downloading: https://oss.sonatype.org/content/groups/public/org/biopax/paxtools/paxtools-core/5.0.0-SNAPSHOT/maven-metadata.xml Downloaded: https://oss.sonatype.org/content/groups/public/org/biopax/paxtools/paxtools-core/5.0.0-SNAPSHOT/maven-metadata.xml (1000 B at 1.2 KB/sec) Downloading: https://oss.sonatype.org/content/groups/public/org/biopax/paxtools/paxtools-core/5.0.0-SNAPSHOT/paxtools-core-5.0.0-20160104.080503-32.pom Downloaded: https://oss.sonatype.org/content/groups/public/org/biopax/paxtools/paxtools-core/5.0.0-SNAPSHOT/paxtools-core-5.0.0-20160104.080503-32.pom (2 KB at 13.6 KB/sec) Downloading: 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https://oss.sonatype.org/content/groups/public/org/biopax/paxtools/pattern/5.0.0-SNAPSHOT/pattern-5.0.0-20160104.080544-32.jar Downloading: https://oss.sonatype.org/content/groups/public/org/biopax/paxtools/sbgn-converter/5.0.0-SNAPSHOT/sbgn-converter-5.0.0-20160104.080524-32.jar Downloaded: https://oss.sonatype.org/content/groups/public/org/slf4j/jul-to-slf4j/1.7.7/jul-to-slf4j-1.7.7.jar (5 KB at 32.5 KB/sec) Downloading: https://oss.sonatype.org/content/groups/public/org/biopax/paxtools/paxtools-trove/5.0.0-SNAPSHOT/paxtools-trove-5.0.0-20160104.080538-32.jar Downloaded: https://oss.sonatype.org/content/groups/public/org/slf4j/jcl-over-slf4j/1.7.7/jcl-over-slf4j-1.7.7.jar (17 KB at 74.0 KB/sec) Downloaded: https://oss.sonatype.org/content/groups/public/org/biopax/paxtools/paxtools-trove/5.0.0-SNAPSHOT/paxtools-trove-5.0.0-20160104.080538-32.jar (3 KB at 33.3 KB/sec) Downloaded: https://oss.sonatype.org/content/groups/public/org/biopax/paxtools/sbgn-converter/5.0.0-SNAPSHOT/sbgn-converter-5.0.0-20160104.080524-32.jar (377 KB at 593.5 KB/sec) Downloaded: https://oss.sonatype.org/content/groups/public/org/biopax/paxtools/paxtools-core/5.0.0-SNAPSHOT/paxtools-core-5.0.0-20160104.080503-32.jar (428 KB at 608.8 KB/sec) Downloaded: https://oss.sonatype.org/content/groups/public/org/biopax/paxtools/pattern/5.0.0-SNAPSHOT/pattern-5.0.0-20160104.080544-32.jar (475 KB at 667.0 KB/sec) [INFO] [INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ biopax --- [INFO] Deleting <http://code.cytoscape.org/jenkins/job/coreapp-biopax/org.cytoscape$biopax/ws/target> [INFO] [INFO] --- maven-resources-plugin:2.6:resources (default-resources) @ biopax --- [WARNING] Using platform encoding (ANSI_X3.4-1968 actually) to copy filtered resources, i.e. build is platform dependent! [INFO] Copying 5 resources [INFO] [INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ biopax --- [INFO] Changes detected - recompiling the module! [INFO] Compiling 13 source files to <http://code.cytoscape.org/jenkins/job/coreapp-biopax/org.cytoscape$biopax/ws/target/classes> [INFO] <http://code.cytoscape.org/jenkins/job/coreapp-biopax/org.cytoscape$biopax/ws/src/main/java/org/cytoscape/biopax/internal/BioPaxMapper.java>: Some input files use unchecked or unsafe operations. [INFO] <http://code.cytoscape.org/jenkins/job/coreapp-biopax/org.cytoscape$biopax/ws/src/main/java/org/cytoscape/biopax/internal/BioPaxMapper.java>: Recompile with -Xlint:unchecked for details. [INFO] ------------------------------------------------------------- [ERROR] COMPILATION ERROR : [INFO] ------------------------------------------------------------- [ERROR] <http://code.cytoscape.org/jenkins/job/coreapp-biopax/org.cytoscape$biopax/ws/src/main/java/org/cytoscape/biopax/internal/BioPaxMapper.java>:[1117,31] package com.sun.xml.bind.v2 does not exist [INFO] 1 error [INFO] ------------------------------------------------------------- -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/cytoscape-cvs. For more options, visit https://groups.google.com/d/optout.
