Branch: refs/heads/develop
Home: https://github.com/cytoscape/cytoscape-impl
Commit: d7d21278e29b5acab78176d33bb484b92897e22b
https://github.com/cytoscape/cytoscape-impl/commit/d7d21278e29b5acab78176d33bb484b92897e22b
Author: Adam Treister <[email protected]>
Date: 2017-09-20 (Wed, 20 Sep 2017)
Changed paths:
M
core-task-impl/src/main/java/org/cytoscape/task/internal/export/network/AbstractLoadNetworkTask.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/export/network/GenerateNetworkViewsTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/export/network/LoadNetworkURLTaskFactoryImpl.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/export/table/ExportTableTaskFactoryImpl.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/loaddatatable/AbstractLoadTableTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/loaddatatable/CombineReaderAndMappingTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/AbstractTableDataTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/AddRowTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/AddRowTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/CreateColumnTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/CreateTableTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/DeleteColumnCommandTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/DeleteColumnCommandTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/DeleteColumnTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/DeleteColumnTaskFactoryImpl.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/DeleteRowTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/DeleteRowTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/DestroyTableTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/GetColumnTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/GetColumnTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/GetRowTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/GetRowTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/GetValueTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/GetValueTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/ImportTableDataTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/ListColumnsTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/ListColumnsTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/ListRowsTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/ListRowsTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/ListTablesTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/ListTablesTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/MapTableToNetworkTablesTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/MergeTablesTaskFactoryImpl.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/RenameColumnTaskFactoryImpl.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/SetTableTitleTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/SetTableTitleTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/SetValuesTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/SetValuesTaskFactory.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/immed/arrow/DiscArrow.java
M
io-impl/impl/src/main/java/org/cytoscape/io/internal/write/xgmml/GenericXGMMLWriter.java
Log Message:
-----------
adding getResults changes to several table task classes
Commit: 0d62a84ddbdf77adf03c2370f044affadaecdabb
https://github.com/cytoscape/cytoscape-impl/commit/0d62a84ddbdf77adf03c2370f044affadaecdabb
Author: Adam Treister <[email protected]>
Date: 2017-09-20 (Wed, 20 Sep 2017)
Changed paths:
M
core-task-impl/src/main/java/org/cytoscape/task/internal/utils/DataUtils.java
Log Message:
-----------
remove superfluous else statements following return statements
Commit: bf88039387dc46ecdd6b2fa6ae450199b952a192
https://github.com/cytoscape/cytoscape-impl/commit/bf88039387dc46ecdd6b2fa6ae450199b952a192
Author: Adam Treister <[email protected]>
Date: 2017-09-20 (Wed, 20 Sep 2017)
Changed paths:
M core-task-impl/src/main/java/org/cytoscape/task/internal/CyActivator.java
Log Message:
-----------
edits to CyActivator to support 3.6 command structure
Commit: 820b82a2aa5f68973a9c5d28b2a2cf95fce4b409
https://github.com/cytoscape/cytoscape-impl/commit/820b82a2aa5f68973a9c5d28b2a2cf95fce4b409
Author: Adam Treister <[email protected]>
Date: 2017-09-20 (Wed, 20 Sep 2017)
Changed paths:
M
command-executor-impl/src/main/java/org/cytoscape/command/internal/available/AvailableCommandsImpl.java
M core-task-impl/src/main/java/org/cytoscape/task/internal/CyActivator.java
R
core-task-impl/src/main/java/org/cytoscape/task/internal/creation/AbstractCreationTask.java
R
core-task-impl/src/main/java/org/cytoscape/task/internal/creation/AbstractNetworkFromSelectionTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/CloneNetworkTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/CloneNetworkTaskFactoryImpl.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/CopyExistingViewTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/CreateNetworkViewEdit.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/CreateNetworkViewTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/CreateNetworkViewTaskFactoryImpl.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/GroupUtils.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/NewEmptyNetworkTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/NewEmptyNetworkTaskFactoryImpl.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/NewNetworkCommandTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/NewNetworkCommandTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesEdgesTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesEdgesTaskFactoryImpl.java
R
core-task-impl/src/main/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesOnlyTask.java
R
core-task-impl/src/main/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesOnlyTaskFactoryImpl.java
R
core-task-impl/src/main/java/org/cytoscape/task/internal/destruction/DestroyNetworkTask.java
R
core-task-impl/src/main/java/org/cytoscape/task/internal/destruction/DestroyNetworkTaskFactoryImpl.java
R
core-task-impl/src/main/java/org/cytoscape/task/internal/destruction/DestroyNetworkViewTask.java
R
core-task-impl/src/main/java/org/cytoscape/task/internal/destruction/DestroyNetworkViewTaskFactoryImpl.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/export/TunableAbstractCyWriter.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/export/ViewWriter.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/AbstractCreationTask.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/AbstractNetworkFromSelectionTask.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/CloneNetworkTask.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/CloneNetworkTaskFactoryImpl.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/DestroyNetworkTask.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/DestroyNetworkTaskFactoryImpl.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/GroupUtils.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/NewEmptyNetworkTask.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/NewEmptyNetworkTaskFactoryImpl.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/NewNetworkCommandTask.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/NewNetworkCommandTaskFactory.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/NewNetworkSelectedNodesEdgesTask.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/NewNetworkSelectedNodesEdgesTaskFactoryImpl.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/NewNetworkSelectedNodesOnlyTask.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/network/NewNetworkSelectedNodesOnlyTaskFactoryImpl.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/networkobjects/AbstractGetTask.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/networkobjects/AbstractPropertyTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/networkobjects/GetEdgePropertiesTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/networkobjects/GetEdgeTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/networkobjects/ListEdgesTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/networkobjects/ListEdgesTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/networkobjects/ListPropertiesTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/networkobjects/RenameEdgeTask.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/networkobjects/RenameEdgeTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/networkobjects/SetEdgePropertiesTask.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/session/NewSessionTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/session/OpenSessionCommandTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/session/OpenSessionTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/session/SaveSessionAsTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/session/SaveSessionTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/CreateEdgeAttributeTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/GetEdgeAttributeTask.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/table/GetNetworkAttributeTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/table/ListEdgeAttributesTask.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/table/ListNetworkAttributesTaskFactory.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/table/SetEdgeAttributeTask.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/view/CopyExistingViewTask.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/view/CreateNetworkViewEdit.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/view/CreateNetworkViewTask.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/view/CreateNetworkViewTaskFactoryImpl.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/view/DestroyNetworkViewTask.java
A
core-task-impl/src/main/java/org/cytoscape/task/internal/view/DestroyNetworkViewTaskFactoryImpl.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/view/GetCurrentNetworkViewTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/view/GetCurrentNetworkViewTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/view/ListNetworkViewsTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/view/ListNetworkViewsTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/view/SetCurrentNetworkViewTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/view/SetCurrentNetworkViewTaskFactory.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/view/UpdateNetworkViewTask.java
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core-task-impl/src/main/java/org/cytoscape/task/internal/view/UpdateNetworkViewTaskFactory.java
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core-task-impl/src/test/java/org/cytoscape/task/internal/creation/CloneNetworkTaskFactoryTest.java
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core-task-impl/src/test/java/org/cytoscape/task/internal/creation/CloneNetworkTaskTest.java
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core-task-impl/src/test/java/org/cytoscape/task/internal/creation/CreateNetworkViewTaskTest.java
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core-task-impl/src/test/java/org/cytoscape/task/internal/creation/NewEmptyNetworkTaskTest.java
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core-task-impl/src/test/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesEdgesTaskFactoryTest.java
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core-task-impl/src/test/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesEdgesTaskTest.java
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core-task-impl/src/test/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesOnlyTaskFactoryTest.java
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core-task-impl/src/test/java/org/cytoscape/task/internal/creation/NewNetworkSelectedNodesOnlyTaskTest.java
R
core-task-impl/src/test/java/org/cytoscape/task/internal/destruction/DestroyNetworkTaskTest.java
R
core-task-impl/src/test/java/org/cytoscape/task/internal/destruction/DestroyNetworkViewTaskTest.java
A
core-task-impl/src/test/java/org/cytoscape/task/internal/network/CloneNetworkTaskFactoryTest.java
A
core-task-impl/src/test/java/org/cytoscape/task/internal/network/CloneNetworkTaskTest.java
A
core-task-impl/src/test/java/org/cytoscape/task/internal/network/DestroyNetworkTaskTest.java
A
core-task-impl/src/test/java/org/cytoscape/task/internal/network/NewEmptyNetworkTaskTest.java
A
core-task-impl/src/test/java/org/cytoscape/task/internal/network/NewNetworkSelectedNodesEdgesTaskFactoryTest.java
A
core-task-impl/src/test/java/org/cytoscape/task/internal/network/NewNetworkSelectedNodesEdgesTaskTest.java
A
core-task-impl/src/test/java/org/cytoscape/task/internal/network/NewNetworkSelectedNodesOnlyTaskFactoryTest.java
A
core-task-impl/src/test/java/org/cytoscape/task/internal/network/NewNetworkSelectedNodesOnlyTaskTest.java
M
core-task-impl/src/test/java/org/cytoscape/task/internal/table/MappingIntegrationTest.java
M
core-task-impl/src/test/java/org/cytoscape/task/internal/table/MergeDataTableTaskTest.java
A
core-task-impl/src/test/java/org/cytoscape/task/internal/view/CreateNetworkViewTaskTest.java
A
core-task-impl/src/test/java/org/cytoscape/task/internal/view/DestroyNetworkViewTaskTest.java
M
io-impl/impl/src/main/java/org/cytoscape/io/internal/write/graphics/BitmapWriter.java
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io-impl/impl/src/main/java/org/cytoscape/io/internal/write/graphics/PDFWriter.java
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io-impl/impl/src/main/java/org/cytoscape/io/internal/write/graphics/PSWriter.java
M
io-impl/impl/src/main/java/org/cytoscape/io/internal/write/graphics/SVGWriter.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkSearchMediator.java
Log Message:
-----------
Merge branch 'develop' of github.com:cytoscape/cytoscape-impl into develop
Compare:
https://github.com/cytoscape/cytoscape-impl/compare/4136f1183d62...820b82a2aa5f
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