Branch: refs/heads/develop
Home: https://github.com/cytoscape/cytoscape-impl
Commit: 7f830c7e3101bdd1967e7789086f9c6d7b5694bd
https://github.com/cytoscape/cytoscape-impl/commit/7f830c7e3101bdd1967e7789086f9c6d7b5694bd
Author: Adam Treister <[email protected]>
Date: 2019-03-01 (Fri, 01 Mar 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/GraphicsUtilities.java
Log Message:
-----------
adding Diamond and Vee, X-Arrow to GraphicsUtilities
Commit: bc5cc49506e07fd3e9446c94f8068c22d6e51614
https://github.com/cytoscape/cytoscape-impl/commit/bc5cc49506e07fd3e9446c94f8068c22d6e51614
Author: Adam Treister <[email protected]>
Date: 2019-03-01 (Fri, 01 Mar 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/ArrowAnnotationImpl.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/GraphicsUtilities.java
Log Message:
-----------
adding Node and Arrow types
Commit: 75649a0c04bee435b33946da1063afa225d81561
https://github.com/cytoscape/cytoscape-impl/commit/75649a0c04bee435b33946da1063afa225d81561
Author: Adam Treister <[email protected]>
Date: 2019-03-01 (Fri, 01 Mar 2019)
Changed paths:
M app-impl/pom.xml
M app-impl/src/main/java/org/cytoscape/app/internal/CyActivator.java
M
app-impl/src/main/java/org/cytoscape/app/internal/action/AppManagerAction.java
M
app-impl/src/main/java/org/cytoscape/app/internal/action/CitationsAction.java
A
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M app-impl/src/main/java/org/cytoscape/app/internal/manager/AppManager.java
M
app-impl/src/main/java/org/cytoscape/app/internal/manager/ParseAppDependencies.java
M app-impl/src/main/java/org/cytoscape/app/internal/manager/Range.java
M app-impl/src/main/java/org/cytoscape/app/internal/manager/Version.java
M app-impl/src/main/java/org/cytoscape/app/internal/net/UpdateManager.java
M app-impl/src/main/java/org/cytoscape/app/internal/net/WebQuerier.java
M
app-impl/src/main/java/org/cytoscape/app/internal/task/InformationTask.java
M
app-impl/src/main/java/org/cytoscape/app/internal/task/ListAvailableTask.java
M app-impl/src/main/java/org/cytoscape/app/internal/ui/AppManagerDialog.java
A
app-impl/src/main/java/org/cytoscape/app/internal/ui/AppManagerMediator.java
A app-impl/src/main/java/org/cytoscape/app/internal/util/AppUtil.java
A app-impl/src/main/java/org/cytoscape/app/internal/util/CoalesceTimer.java
R app-impl/src/main/java/org/cytoscape/app/internal/util/Utils.java
R app-impl/src/main/resources/images/alert-red.gif
R app-impl/src/main/resources/images/alert-red2.gif
R app-impl/src/main/resources/images/check-mark.gif
M app-impl/src/test/java/org/cytoscape/app/internal/net/WebQuerierTest.java
A app-impl/src/test/java/org/cytoscape/app/internal/util/AppUtilTest.java
R app-impl/src/test/java/org/cytoscape/app/internal/util/UtilTest.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/help/HelpTask.java
M equations-impl/pom.xml
M
equations-impl/src/main/java/org/cytoscape/equations/internal/EquationParserImpl.java
M
layout-cytoscape-impl/src/main/java/csapps/layout/algorithms/GroupAttributesLayoutTask.java
M
layout-cytoscape-impl/src/main/java/csapps/layout/algorithms/cose/CoSELayoutAlgorithmTask.java
M linkout-impl/src/main/java/org/cytoscape/linkout/internal/LinkOut.java
M linkout-impl/src/main/java/org/cytoscape/linkout/internal/LinkoutTask.java
M
log-swing-impl/src/main/java/org/cytoscape/log/internal/AllLogMessagesProcesser.java
M log-swing-impl/src/main/java/org/cytoscape/log/internal/ConsoleDialog.java
M log-swing-impl/src/main/java/org/cytoscape/log/internal/CyActivator.java
M log-swing-impl/src/main/java/org/cytoscape/log/internal/CyStatusBar.java
M log-swing-impl/src/main/java/org/cytoscape/log/internal/LogViewer.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/CyActivator.java
M
model-impl/impl/src/main/java/org/cytoscape/model/internal/AbstractTableFacade.java
M
model-impl/impl/src/main/java/org/cytoscape/model/internal/CyNetworkFactoryImpl.java
M
model-impl/impl/src/main/java/org/cytoscape/model/internal/CyNetworkManagerImpl.java
M
model-impl/impl/src/main/java/org/cytoscape/model/internal/CyTableImpl.java
M
model-impl/impl/src/main/java/org/cytoscape/model/internal/CyTableManagerImpl.java
M
model-impl/impl/src/main/java/org/cytoscape/model/internal/DefaultTablesNetwork.java
M model-impl/impl/src/main/java/org/cytoscape/model/internal/EqnSupport.java
M
model-impl/impl/src/main/java/org/cytoscape/model/internal/LocalTableFacade.java
M
model-impl/impl/src/main/java/org/cytoscape/model/internal/SharedTableFacade.java
M presentation-impl/pom.xml
M
presentation-impl/src/main/java/org/cytoscape/view/presentation/internal/RenderingEngineManagerImpl.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/shutdown/ConfigDirPropertyWriter.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/undo/RedoAction.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/undo/UndoAction.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/BiModalJSplitPane.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeDesktop.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeMenuBar.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/MemStatusPanel.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkSearchMediator.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/StarterPanel.java
M
swing-util-impl/src/main/java/org/cytoscape/util/swing/internal/OpenBrowserImpl.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/io/TableColumnStatFileIO.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/view/BrowserTable.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/reader/ExcelNetworkSheetReader.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/reader/ontology/OBOReader.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/ImportOntologyAndAnnotationAction.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/MapGeneAssociationTask.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/RegisterOntologyTask.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/SelectFileTableTask.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/SelectURLTableTask.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/OntologyPanelBuilder.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/util/OntologyUtil.java
M
viewmodel-impl/impl/src/main/java/org/cytoscape/view/model/internal/CyNetworkViewManagerImpl.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/action/EditSelectedDiscreteValuesAction.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/task/ImportDefaultVizmapTask.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/util/mapgenerator/NumberSeriesMappingGenerator.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/util/mapgenerator/RandomNumberMappingGenerator.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/VizMapPropertyBuilder.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/VizMapperMediator.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/cellrenderer/NumberContinuousCellRenderer.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/ContinuousMappingEditorPanel.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/propertyeditor/CyNumberPropertyEditor.java
M
vizmap-impl/impl/src/main/java/org/cytoscape/view/vizmap/internal/ApplyToNetworkHandler.java
M
vizmap-impl/impl/src/main/java/org/cytoscape/view/vizmap/internal/VisualMappingManagerImpl.java
M
vizmap-impl/impl/src/main/java/org/cytoscape/view/vizmap/internal/VisualStyleFactoryImpl.java
M
vizmap-impl/impl/src/main/java/org/cytoscape/view/vizmap/internal/VisualStyleImpl.java
M
webservice-impl/src/main/java/org/cytoscape/webservice/internal/ui/AboutDialog.java
M
webservice-impl/src/main/java/org/cytoscape/webservice/internal/ui/WebServiceImportDialog.java
M work-impl/pom.xml
M
work-impl/src/main/java/org/cytoscape/work/internal/sync/LoggingTaskMonitor.java
M
work-impl/src/main/java/org/cytoscape/work/internal/sync/SyncTaskManager.java
M
work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/task/JPanelTaskManager.java
M
work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/tunables/BoundedHandler.java
M
work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/tunables/JDialogTunableMutator.java
M
work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/tunables/JPanelTunableMutator.java
M
work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/tunables/StringHandler.java
M
work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/tunables/URLHandler.java
M
work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/tunables/UserActionHandler.java
Log Message:
-----------
Merge branch 'develop' of github.com:cytoscape/cytoscape-impl into develop
Compare:
https://github.com/cytoscape/cytoscape-impl/compare/058ba647396c...75649a0c04be
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