Branch: refs/heads/develop
Home: https://github.com/cytoscape/cytoscape-impl
Commit: 6042798ec85675019d6472b945ad5d3cb32f7b9f
https://github.com/cytoscape/cytoscape-impl/commit/6042798ec85675019d6472b945ad5d3cb32f7b9f
Author: Mike Kucera <[email protected]>
Date: 2019-07-04 (Thu, 04 Jul 2019)
Changed paths:
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ArbitraryGraphicsCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingCanvas.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingComponent.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingRenderingEngineFactory.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InnerCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InternalFrameComponent.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NVLTFActionSupport.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ThumbnailView.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/AnnotationManagerImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/AnnotationTree.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/CyAnnotator.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AbstractAnnotation.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnnotationSelection.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/ArrowAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/BoundedTextAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/DingAnnotation.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/GroupAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/ImageAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/ShapeAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/TextAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/create/ArrowAnnotationFactory.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/ArrowAnnotationDialog.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/BoundedTextAnnotationDialog.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/ImageAnnotationDialog.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/LoadImageDialog.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/PreviewPanel.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/ShapeAnnotationDialog.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/TextAnnotationDialog.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/AddAnnotationTask.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/EditAnnotationTask.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/GroupAnnotationsTask.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/ReloadImagesTask.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/internal/util/ViewUtil.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphRenderer.java
Log Message:
-----------
First pass at de-swing-ifying the renderer. Annotations and some other
features not fully working yet.
Commit: b601f31fce7fc5a62c4834f86d969be072a34ab2
https://github.com/cytoscape/cytoscape-impl/commit/b601f31fce7fc5a62c4834f86d969be072a34ab2
Author: Mike Kucera <[email protected]>
Date: 2019-07-04 (Thu, 04 Jul 2019)
Changed paths:
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core-task-impl/src/main/java/org/cytoscape/task/internal/utils/IconUtil.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
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filter2-impl/src/main/java/org/cytoscape/filter/internal/FilterCytoPanelComponent.java
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graphml-impl/src/main/java/org/cytoscape/io/internal/read/graphml/GraphMLParser.java
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graphml-impl/src/main/java/org/cytoscape/io/internal/read/graphml/GraphMLToken.java
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graphml-impl/src/test/java/org/cytoscape/data/reader/graphml/GraphMLReaderTest.java
A graphml-impl/src/test/resources/desc.graphml
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swing-application-impl/src/main/java/org/cytoscape/internal/CyActivator.java
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swing-application-impl/src/main/java/org/cytoscape/internal/actions/StarterPanelAction.java
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swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoPanelImpl.java
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swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoPanelNameInternal.java
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swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeDesktop.java
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swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeMenus.java
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swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeToolBar.java
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swing-application-impl/src/main/java/org/cytoscape/internal/view/util/ViewUtil.java
A swing-application-impl/src/main/resources/toolbar.stoplist
A
swing-application-impl/src/test/java/org/cytoscape/internal/view/util/ViewUtilTest.java
Log Message:
-----------
Merge branch 'develop' into feature/renderer-async
Commit: 394c4d61eda1ea7a606cfdc03ad4996677871c6c
https://github.com/cytoscape/cytoscape-impl/commit/394c4d61eda1ea7a606cfdc03ad4996677871c6c
Author: Mike Kucera <[email protected]>
Date: 2019-07-04 (Thu, 04 Jul 2019)
Changed paths:
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationCanvas.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ArbitraryGraphicsCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/AnnotationManagerImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/AnnotationTree.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/CyAnnotator.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AbstractAnnotation.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/DingAnnotation.java
Log Message:
-----------
Rename ArbitraryGraphicsCanvas to AnnotationCanvas
Commit: ee43093719514a7f84f8902a39f1a1031d71972d
https://github.com/cytoscape/cytoscape-impl/commit/ee43093719514a7f84f8902a39f1a1031d71972d
Author: Mike Kucera <[email protected]>
Date: 2019-07-15 (Mon, 15 Jul 2019)
Changed paths:
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ColorCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InnerCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NVLTFActionSupport.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkTransform.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ThumbnailView.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ViewportChangeListener.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/AnnotationManagerImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/CyAnnotator.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AbstractAnnotation.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnnotationSelection.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/DingAnnotation.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/ReorderAnnotationsTask.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/utils/ViewUtils.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/undo/AnnotationEdit.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/undo/ViewState.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/DiscreteProgressMonitor.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/ProgressMonitor.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/SubProgressMonitor.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/immed/GraphGraphics.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphRenderer.java
Log Message:
-----------
Introducing CompositeCanvas and NetworkTransform, first steps to a
parallel renderer. Work in progress.
Commit: c1e7a2a0f455cfefe2ee95ded761eec7e3d8d2f7
https://github.com/cytoscape/cytoscape-impl/commit/c1e7a2a0f455cfefe2ee95ded761eec7e3d8d2f7
Author: Mike Kucera <[email protected]>
Date: 2019-07-17 (Wed, 17 Jul 2019)
Changed paths:
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ColorCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InnerCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkImageBuffer.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkPicker.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkTransform.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/CyAnnotator.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/ArrowAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/GroupAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/ShapeAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/immed/GraphGraphics.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphRenderer.java
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ding-impl/ding-presentation-impl/src/test/java/org/cytoscape/graph/render/immed/GraphGraphicsTest.java
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ding-impl/ding-presentation-impl/src/test/java/org/cytoscape/graph/render/stateful/GraphRendererTest.java
Log Message:
-----------
Major refactoring to add NetworkImageBuffer and NetworkPicker.
Commit: d23220f3e9b982dc1e4d534b2694855c21bd24d0
https://github.com/cytoscape/cytoscape-impl/commit/d23220f3e9b982dc1e4d534b2694855c21bd24d0
Author: Mike Kucera <[email protected]>
Date: 2019-07-17 (Wed, 17 Jul 2019)
Changed paths:
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationCanvas.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationSelectionCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/CyAnnotator.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnnotationSelection.java
Log Message:
-----------
AnnotationSelection now has a canvas.
Commit: 998423fc9aa709e9a609803039d9716fb91ab820
https://github.com/cytoscape/cytoscape-impl/commit/998423fc9aa709e9a609803039d9716fb91ab820
Author: Mike Kucera <[email protected]>
Date: 2019-07-17 (Wed, 17 Jul 2019)
Changed paths:
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ColorCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkImageBuffer.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkPicker.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkTransform.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphRenderer.java
Log Message:
-----------
Cleanup.
Commit: 1d6c36012b688e463eb5b792a882e1e6ba0642d7
https://github.com/cytoscape/cytoscape-impl/commit/1d6c36012b688e463eb5b792a882e1e6ba0642d7
Author: Mike Kucera <[email protected]>
Date: 2019-07-19 (Fri, 19 Jul 2019)
Changed paths:
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationSelectionCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ColorCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingCanvas.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/EdgeCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InnerCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkPicker.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NodeCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/immed/GraphGraphics.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphRenderer.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/RenderDetailFlags.java
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ding-impl/ding-presentation-impl/src/test/java/org/cytoscape/graph/render/immed/GraphGraphicsTest.java
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ding-impl/ding-presentation-impl/src/test/java/org/cytoscape/graph/render/stateful/GraphRendererTest.java
Log Message:
-----------
Introducing NodeCanvas and EdgeCanvas, render in parallel.
Commit: 77e5f6bffb9c7824b0ecc8afae97f6e06e6d429d
https://github.com/cytoscape/cytoscape-impl/commit/77e5f6bffb9c7824b0ecc8afae97f6e06e6d429d
Author: Mike Kucera <[email protected]>
Date: 2019-07-24 (Wed, 24 Jul 2019)
Changed paths:
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/customgraphics/bitmap/URLImageCustomGraphics.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView2.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkImageBuffer.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkPicker.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkTransform.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NodeCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/AnnotationManagerImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/AnnotationTree.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/CyAnnotator.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AbstractAnnotation.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnnotationSelection.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/ArrowAnnotationImpl.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/BoundedTextAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/DingAnnotation.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/GroupAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/ImageAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/ShapeAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/TextAnnotationImpl.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/create/ArrowAnnotationFactory.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/ArrowAnnotationDialog.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/AddArrowTaskFactory.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/EditAnnotationTaskFactory.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/ReloadImagesTask.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/RemoveAnnotationTaskFactory.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/UngroupAnnotationsTaskFactory.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/ui/AnnotationMainPanel.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/ui/AnnotationMediator.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/utils/ViewUtils.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/undo/AnnotationEdit.java
Log Message:
-----------
Decoupling annotations from the canvas (work in progress).
Commit: 8997027d7e109229785faf98d0f7f386e2a3d433
https://github.com/cytoscape/cytoscape-impl/commit/8997027d7e109229785faf98d0f7f386e2a3d433
Author: Mike Kucera <[email protected]>
Date: 2019-07-25 (Thu, 25 Jul 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView2.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingNavigationRenderingEngineFactory.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/EdgeCanvas.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkImageBuffer.java
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ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkPicker.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkTransform.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NodeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/ArrowAnnotationDialog.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/BoundedTextAnnotationDialog.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/ImageAnnotationDialog.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/LoadImageDialog.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/ShapeAnnotationDialog.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/TextAnnotationDialog.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/undo/ViewState.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphRenderer.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/RenderDetailFlags.java
Log Message:
-----------
New Birds-eye-view that uses CompositeCanvas.
Commit: c4928b2a50686b950457309769c7ab53016381a5
https://github.com/cytoscape/cytoscape-impl/commit/c4928b2a50686b950457309769c7ab53016381a5
Author: Mike Kucera <[email protected]>
Date: 2019-07-29 (Mon, 29 Jul 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView2.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingNavigationRenderingEngineFactory.java
Log Message:
-----------
Use common ExecutorService for main view and birds-eye-view
Commit: d0ea6703c1098bd383980244d88c020073bd56dd
https://github.com/cytoscape/cytoscape-impl/commit/d0ea6703c1098bd383980244d88c020073bd56dd
Author: Mike Kucera <[email protected]>
Date: 2019-07-31 (Wed, 31 Jul 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationSelectionCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView2.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ColorCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/EdgeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NodeCanvas.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/ConsoleProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/DiscreteProgressMonitor.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/NullProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/ProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/SubProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphRenderer.java
Log Message:
-----------
Introducing ProgressMonitor for canvases
Commit: 61624cc277e803fe592afd0e0efca9d2a88f60aa
https://github.com/cytoscape/cytoscape-impl/commit/61624cc277e803fe592afd0e0efca9d2a88f60aa
Author: Mike Kucera <[email protected]>
Date: 2019-07-31 (Wed, 31 Jul 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView2.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingNavigationRenderingEngineFactory.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
Log Message:
-----------
some cleanup
Commit: 1d82d6aa82b2c2cdf0a7877fab9332fe2bae42fb
https://github.com/cytoscape/cytoscape-impl/commit/1d82d6aa82b2c2cdf0a7877fab9332fe2bae42fb
Author: Mike Kucera <[email protected]>
Date: 2019-08-06 (Tue, 06 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/PrintLOD.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeViewLOD.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingGraphLOD.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ImageFuture.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkPicker.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/CyAnnotator.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/ConsoleProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/DiscreteProgressMonitor.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/NullProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/ProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/SubProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphLOD.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/RenderDetailFlags.java
Log Message:
-----------
Addition of slow and fast canvases. Work in progress.
Commit: 9fe522f4cf40601814b66a3543ae3624aebd80d6
https://github.com/cytoscape/cytoscape-impl/commit/9fe522f4cf40601814b66a3543ae3624aebd80d6
Author: Mike Kucera <[email protected]>
Date: 2019-08-07 (Wed, 07 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ContentChangeListener.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ImageFuture.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/TransformChangeListener.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/DiscreteProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphRenderer.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/RenderDetailFlags.java
Log Message:
-----------
First attempt at painting async using ImageFuture. Work in progress.
Commit: d350875fdc3efb05bbb8b0217451142b3be34eba
https://github.com/cytoscape/cytoscape-impl/commit/d350875fdc3efb05bbb8b0217451142b3be34eba
Author: Mike Kucera <[email protected]>
Date: 2019-08-07 (Wed, 07 Aug 2019)
Changed paths:
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationSelectionCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/CyAnnotator.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnnotationSelection.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphRenderer.java
Log Message:
-----------
Removed AnnotationSelectionCanvas, drawing on glass pane instead.
Commit: 795ecf82e2e81c2205ecb98015454530795c8b37
https://github.com/cytoscape/cytoscape-impl/commit/795ecf82e2e81c2205ecb98015454530795c8b37
Author: Mike Kucera <[email protected]>
Date: 2019-08-08 (Thu, 08 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ImageFuture.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/ConsoleProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/DiscreteProgressMonitor.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/NoOutputProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/ProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/SubProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/RenderDetailFlags.java
Log Message:
-----------
Cleanup.
Commit: 81f611f9de3ebb4cfc8d5d04eacf2b0e74519073
https://github.com/cytoscape/cytoscape-impl/commit/81f611f9de3ebb4cfc8d5d04eacf2b0e74519073
Author: Mike Kucera <[email protected]>
Date: 2019-08-19 (Mon, 19 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
Log Message:
-----------
Minor fixes
Commit: e9a2204f90bae0f21f8b8f05a6379c60df336889
https://github.com/cytoscape/cytoscape-impl/commit/e9a2204f90bae0f21f8b8f05a6379c60df336889
Author: Mike Kucera <[email protected]>
Date: 2019-08-19 (Mon, 19 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/internal/util/ViewUtil.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/CyActivator.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoPanelImpl.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeDesktop.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/help/HelpReportABugTask.java
A
swing-application-impl/src/main/java/org/cytoscape/internal/view/help/HelpTourTask.java
A
swing-application-impl/src/main/java/org/cytoscape/internal/view/help/HelpTourTaskFactory.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/help/HelpTutorialsTask.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/help/HelpUserManualTask.java
Log Message:
-----------
Merge branch 'develop' into feature/renderer-async
Commit: e16525af3e206df5c59922912dc84c66ec1b988d
https://github.com/cytoscape/cytoscape-impl/commit/e16525af3e206df5c59922912dc84c66ec1b988d
Author: Mike Kucera <[email protected]>
Date: 2019-08-19 (Mon, 19 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/CyActivator.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugCallback.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DingDebugPanel.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
Log Message:
-----------
Add debug panel.
Commit: 3a558c53d4a9a45ab62a0ac25fc093d7508cd85a
https://github.com/cytoscape/cytoscape-impl/commit/3a558c53d4a9a45ab62a0ac25fc093d7508cd85a
Author: Mike Kucera <[email protected]>
Date: 2019-08-20 (Tue, 20 Aug 2019)
Changed paths:
A .travis.settings.xml
A .travis.yml
M app-impl/pom.xml
M application-impl/pom.xml
M command-executor-impl/pom.xml
M core-task-impl/pom.xml
M
core-task-impl/src/test/java/org/cytoscape/task/internal/hide/HideUtilsTest.java
M
core-task-impl/src/test/java/org/cytoscape/task/internal/io/ViewWriterTest.java
M datasource-impl/pom.xml
M ding-impl/ding-presentation-impl/pom.xml
M ding-impl/performance-debug/pom.xml
M edge-bundler-impl/pom.xml
M editor-impl/pom.xml
M equations-functions-impl/pom.xml
M equations-impl/pom.xml
M event-impl/pom.xml
M filter-impl/pom.xml
M filter2-impl/pom.xml
M graphml-impl/pom.xml
M group-impl/pom.xml
M gui-cmdline-parser-impl/pom.xml
M headless-application-impl/pom.xml
M headless-cmdline-parser-impl/pom.xml
M io-impl/impl/pom.xml
M
io-impl/impl/src/test/java/org/cytoscape/io/internal/read/AbstractNetworkReaderTest.java
M
io-impl/impl/src/test/java/org/cytoscape/io/internal/write/xgmml/AbstractXGMMLWriterTest.java
M io-impl/performance/pom.xml
M io-impl/pom.xml
M jobs-impl/pom.xml
M layout-cytoscape-impl/pom.xml
M layout-impl/pom.xml
M layout-jgraph-impl/pom.xml
M layout-prefuse-impl/pom.xml
M log-swing-impl/pom.xml
M manual-layout-impl/pom.xml
M model-impl/performance-debug/pom.xml
M model-impl/pom.xml
M model-impl/table-performance-debug/pom.xml
M pom.xml
M presentation-impl/pom.xml
M property-impl/pom.xml
M scripting-impl/pom.xml
M search-impl/pom.xml
M session-impl/impl/pom.xml
M session-impl/pom.xml
M swing-application-impl/pom.xml
M swing-util-impl/pom.xml
M table-browser-impl/pom.xml
M
table-browser-impl/src/test/java/org/cytoscape/browser/internal/view/BrowserTableTest.java
M table-import-impl/pom.xml
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/ImportTablePanel.java
M util-impl/pom.xml
M viewmodel-impl/pom.xml
M vizmap-gui-core-impl/pom.xml
M vizmap-impl/pom.xml
M webservice-impl/pom.xml
M work-headless-impl/pom.xml
M work-impl/pom.xml
M work-swing-impl/pom.xml
Log Message:
-----------
Merge branch 'develop' into feature/renderer-async
Commit: b0fb02a87d681e9315c731770e4a5a9a963ba6a4
https://github.com/cytoscape/cytoscape-impl/commit/b0fb02a87d681e9315c731770e4a5a9a963ba6a4
Author: Mike Kucera <[email protected]>
Date: 2019-08-20 (Tue, 20 Aug 2019)
Changed paths:
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ImageFuture.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/ConsoleProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/ProgressMonitor.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/MacCyActivator.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/actions/FullScreenMacAction.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/MacFullScreenEnabler.java
Log Message:
-----------
Don't render concurrently, avoids flicker
Commit: 526ddf924d784bf92eba4b1f842f41d4332dd663
https://github.com/cytoscape/cytoscape-impl/commit/526ddf924d784bf92eba4b1f842f41d4332dd663
Author: Mike Kucera <[email protected]>
Date: 2019-08-20 (Tue, 20 Aug 2019)
Changed paths:
M
swing-application-impl/src/main/java/org/cytoscape/internal/MacCyActivator.java
Log Message:
-----------
Merge branch 'develop' into feature/renderer-async
Commit: 79674d787caa7ba13479015de2e265870eba1812
https://github.com/cytoscape/cytoscape-impl/commit/79674d787caa7ba13479015de2e265870eba1812
Author: Mike Kucera <[email protected]>
Date: 2019-08-21 (Wed, 21 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugCallback.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DingDebugPanel.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/FrameType.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
Log Message:
-----------
Enable Birds-Eye-View again.
Commit: 885bc8f4cb3833823e48ba843d51d631fc8f75d0
https://github.com/cytoscape/cytoscape-impl/commit/885bc8f4cb3833823e48ba843d51d631fc8f75d0
Author: Mike Kucera <[email protected]>
Date: 2019-08-21 (Wed, 21 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
Log Message:
-----------
Fix birds-eye-view panning
Commit: d399e6613ac46111d5511be5f44210dc230a59df
https://github.com/cytoscape/cytoscape-impl/commit/d399e6613ac46111d5511be5f44210dc230a59df
Author: Mike Kucera <[email protected]>
Date: 2019-08-22 (Thu, 22 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DingDebugPanel.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ColorCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/EdgeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ImageFuture.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkImageBuffer.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NodeCanvas.java
Log Message:
-----------
Fix image export background color.
Commit: 754dbe4488e1a04d54871c39e74fba57478663d0
https://github.com/cytoscape/cytoscape-impl/commit/754dbe4488e1a04d54871c39e74fba57478663d0
Author: Mike Kucera <[email protected]>
Date: 2019-08-26 (Mon, 26 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DingDebugPanel.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/AnnotationCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ColorCanvas.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/CompositeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingCanvas.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/EdgeCanvas.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ImageFuture.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/MinimalNetwork.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkImageBuffer.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkTransform.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NodeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/TransformChangeListener.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/AnnotationCanvas.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/ColorCanvas.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/CompositeGraphicsCanvas.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/CompositeImageCanvas.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/DingCanvas.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/EdgeCanvas.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/ImageFuture.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/NetworkGraphicsTransform.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/NetworkImageBuffer.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/NetworkTransform.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/NodeCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnnotationSelection.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/immed/GraphGraphics.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/RenderDetailFlags.java
M
ding-impl/ding-presentation-impl/src/test/java/org/cytoscape/graph/render/immed/GraphGraphicsTest.java
M
ding-impl/ding-presentation-impl/src/test/java/org/cytoscape/graph/render/stateful/GraphRendererTest.java
Log Message:
-----------
Fix network image export.
Commit: 0542c9904959de658a56a7a580c17f5c08388cbb
https://github.com/cytoscape/cytoscape-impl/commit/0542c9904959de658a56a7a580c17f5c08388cbb
Author: Mike Kucera <[email protected]>
Date: 2019-08-26 (Mon, 26 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
Log Message:
-----------
Fix content change listener.
Commit: 59b74220b10b6201dd381e6e70be6b6d6a039424
https://github.com/cytoscape/cytoscape-impl/commit/59b74220b10b6201dd381e6e70be6b6d6a039424
Author: Mike Kucera <[email protected]>
Date: 2019-08-27 (Tue, 27 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingThumbnailRenderingEngineFactory.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ThumbnailChangeListener.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ThumbnailView.java
Log Message:
-----------
Fix thumbnail view.
Commit: b4d0c5bce8472efe2e4fe8d2c36d787fddf19659
https://github.com/cytoscape/cytoscape-impl/commit/b4d0c5bce8472efe2e4fe8d2c36d787fddf19659
Author: Mike Kucera <[email protected]>
Date: 2019-08-27 (Tue, 27 Aug 2019)
Changed paths:
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/C2DMappingEditorPanel.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/ContinuousTrackRenderer.java
Log Message:
-----------
Merge branch 'develop' into feature/renderer-async
Commit: 11b7d3c6735985d4d719366ca7172ae9f27a66ce
https://github.com/cytoscape/cytoscape-impl/commit/11b7d3c6735985d4d719366ca7172ae9f27a66ce
Author: Mike Kucera <[email protected]>
Date: 2019-08-30 (Fri, 30 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/NetworkPicker.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/AnnotationCanvas.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/AnnotationSelectionCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/CompositeImageCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/NetworkTransform.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/CyAnnotator.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AbstractAnnotation.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnchorLocation.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnnotationSelection.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnnotationSelection2.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/ArrowAnnotationImpl.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/ArrowAnnotationDialog.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/BoundedTextAnnotationDialog.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/LoadImageDialog.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/ShapeAnnotationDialog.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/dialogs/TextAnnotationDialog.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/AddAnnotationTask.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/AddAnnotationTaskFactory.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/tasks/ReorderSelectedAnnotationsTaskFactory.java
Log Message:
-----------
In process of fixing annotation selection.
Commit: d844c9efd842b9676e2e039b997984e69c31b9be
https://github.com/cytoscape/cytoscape-impl/commit/d844c9efd842b9676e2e039b997984e69c31b9be
Author: Mike Kucera <[email protected]>
Date: 2019-08-30 (Fri, 30 Aug 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugCallback.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugFrameType.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DingDebugPanel.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/FrameType.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/CompositeImageCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/DingCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/ImageFuture.java
Log Message:
-----------
Add ability to render just annotation layers.
Commit: 5eba2a45f5f3983e7f0fa8acf8287bc159662591
https://github.com/cytoscape/cytoscape-impl/commit/5eba2a45f5f3983e7f0fa8acf8287bc159662591
Author: Mike Kucera <[email protected]>
Date: 2019-09-03 (Tue, 03 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DingDebugPanel.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ThumbnailView.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/AnnotationSelectionCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/CompositeImageCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/CyAnnotator.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnnotationSelection2.java
Log Message:
-----------
Fix AnnotationSelection(2)
Commit: 0fde2dfdf6f0bdbaf3c8fa8b3c7eb18c8d77a2df
https://github.com/cytoscape/cytoscape-impl/commit/0fde2dfdf6f0bdbaf3c8fa8b3c7eb18c8d77a2df
Author: Mike Kucera <[email protected]>
Date: 2019-09-03 (Tue, 03 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/CyAnnotator.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnchorLocation.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnnotationSelection.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/cyannotator/annotations/AnnotationSelection2.java
Log Message:
-----------
Cleanup in AnnotaitonSelection
Commit: 928608b9562888056ff215a173a6048488cf99c3
https://github.com/cytoscape/cytoscape-impl/commit/928608b9562888056ff215a173a6048488cf99c3
Author: Mike Kucera <[email protected]>
Date: 2019-09-04 (Wed, 04 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/immed/GraphGraphics.java
Log Message:
-----------
Fix bug with edge rendering
Commit: 0d5fc4d4e14fa03439f69f6061fddf835531b26b
https://github.com/cytoscape/cytoscape-impl/commit/0d5fc4d4e14fa03439f69f6061fddf835531b26b
Author: Mike Kucera <[email protected]>
Date: 2019-09-04 (Wed, 04 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/PrintLOD.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeViewLOD.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingGraphLOD.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/CompositeImageCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphLOD.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphRenderer.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/RenderDetailFlags.java
Log Message:
-----------
Don't count edges when creating RenderDetailFlags, use heuristic instead
(performance)
Commit: 071343880c055790ff22e7ed2be4e19e3ebd657a
https://github.com/cytoscape/cytoscape-impl/commit/071343880c055790ff22e7ed2be4e19e3ebd657a
Author: Mike Kucera <[email protected]>
Date: 2019-09-04 (Wed, 04 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/ThumbnailView.java
Log Message:
-----------
Fix thumbnail, don't render if not visible
Commit: 7848034382c6f4c5928a185c972055289d560114
https://github.com/cytoscape/cytoscape-impl/commit/7848034382c6f4c5928a185c972055289d560114
Author: Mike Kucera <[email protected]>
Date: 2019-09-04 (Wed, 04 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugCallback.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DingDebugPanel.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphRenderer.java
Log Message:
-----------
cleanup
Commit: df970bb1c4bb490ea223cbc452654fac066956e2
https://github.com/cytoscape/cytoscape-impl/commit/df970bb1c4bb490ea223cbc452654fac066956e2
Author: Mike Kucera <[email protected]>
Date: 2019-09-04 (Wed, 04 Sep 2019)
Changed paths:
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/util/IconUtil.java
M swing-application-impl/pom.xml
M
swing-application-impl/src/main/java/org/cytoscape/internal/CyActivator.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/util/IconUtil.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeDesktop.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkViewContainer.java
M swing-util-impl/src/main/resources/fonts/cytoscape-3.ttf
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/CyActivator.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/util/IconUtil.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/view/AbstractTableBrowser.java
A
table-browser-impl/src/main/java/org/cytoscape/browser/internal/view/TableBrowserMediator.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/view/TableBrowserToolBar.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/ImportTableDataTask.java
M
work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/tunables/JPanelTunableMutator.java
Log Message:
-----------
Merge branch 'develop' into feature/renderer-async
Commit: 5978ad39d473863cfc93d44468eb55b8128ea36a
https://github.com/cytoscape/cytoscape-impl/commit/5978ad39d473863cfc93d44468eb55b8128ea36a
Author: Mike Kucera <[email protected]>
Date: 2019-09-10 (Tue, 10 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingComponent.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingLock.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingNetworkViewFactory.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/MinimalNetwork.java
Log Message:
-----------
Some cleanup
Commit: 919819422ad8b6c285bd1f9d965096b59d127352
https://github.com/cytoscape/cytoscape-impl/commit/919819422ad8b6c285bd1f9d965096b59d127352
Author: Mike Kucera <[email protected]>
Date: 2019-09-11 (Wed, 11 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugFrameType.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DingDebugPanel.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/FramePanel.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeViewLOD.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingGraphLOD.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DingNavigationRenderingEngineFactory.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/RenderComponent.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/RenderComponentBirdsEyeView.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/RenderComponentMain.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/TransformChangeListener.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/CompositeImageCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/ImageFuture.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/work/SubProgressMonitor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/GraphLOD.java
Log Message:
-----------
Render birds-eye-view asynchronously.
Commit: b968464fbebe83bfcb94df35beb527cb15dc2f77
https://github.com/cytoscape/cytoscape-impl/commit/b968464fbebe83bfcb94df35beb527cb15dc2f77
Author: Mike Kucera <[email protected]>
Date: 2019-09-11 (Wed, 11 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/BirdsEyeView.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/RenderComponent.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/RenderComponentBirdsEyeView.java
R
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/RenderComponentMain.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/BirdsEyeViewRenderComponent.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/MainRenderComponent.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/RenderComponent.java
Log Message:
-----------
Move RenderComponent to canvas package.
Commit: 521c0cf2205ee6e56199e415ab9b62f3320fd71f
https://github.com/cytoscape/cytoscape-impl/commit/521c0cf2205ee6e56199e415ab9b62f3320fd71f
Author: Mike Kucera <[email protected]>
Date: 2019-09-12 (Thu, 12 Sep 2019)
Changed paths:
M
viewmodel-impl/impl/src/main/java/org/cytoscape/view/model/internal/CyNetworkViewFactoryFactoryImpl.java
M
vizmap-impl/impl/src/main/java/org/cytoscape/view/vizmap/internal/AbstractApplyHandler.java
Log Message:
-----------
Fix bug where deleting mapping on the Size VP had no effect.
Commit: e130f4e864923bb813b21947fe0b56afa34a25cf
https://github.com/cytoscape/cytoscape-impl/commit/e130f4e864923bb813b21947fe0b56afa34a25cf
Author: Mike Kucera <[email protected]>
Date: 2019-09-13 (Fri, 13 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugCallback.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugEntry.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugProgressMonitor.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DebugTableModel.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DingDebugPanel.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/FramePanel.java
A
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/MaxSizeListModel.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/CompositeImageCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/stateful/RenderDetailFlags.java
Log Message:
-----------
Improve DingDebugPanel
Commit: ef9e9814a4264565910e24f8dae98173ed0fb767
https://github.com/cytoscape/cytoscape-impl/commit/ef9e9814a4264565910e24f8dae98173ed0fb767
Author: Mike Kucera <[email protected]>
Date: 2019-09-15 (Sun, 15 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
viewmodel-impl/impl/src/main/java/org/cytoscape/view/model/internal/model/snapshot/CyNetworkViewSnapshotImpl.java
Log Message:
-----------
Use ConcurrentHashMap to avoid hang when getting list of nodes from
snapshot.
Commit: 26519f47aa6b788a12c47e8fbee85994953fbf87
https://github.com/cytoscape/cytoscape-impl/commit/26519f47aa6b788a12c47e8fbee85994953fbf87
Author: Mike Kucera <[email protected]>
Date: 2019-09-16 (Mon, 16 Sep 2019)
Changed paths:
M
equations-impl/src/main/java/org/cytoscape/equations/internal/builtins/Value.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/CyActivator.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/view/AbstractTableBrowser.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/view/BrowserTableHeaderRenderer.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/view/BrowserTableModel.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/view/DefaultTableBrowser.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/view/GlobalTableBrowser.java
M
table-browser-impl/src/main/java/org/cytoscape/browser/internal/view/TableBrowserMediator.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/CyActivator.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/ImportTableDataTask.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/LoadTableFileTaskFactoryImpl.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/TableImportContext.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/C2CEditor.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/C2CMappingEditorPanel.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/C2DEditor.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/C2DMappingEditorPanel.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/ContinuousMappingEditorPanel.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/ContinuousTrackRenderer.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/GradientEditor.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/GradientEditorPanel.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/mappingeditor/TriangleThumbRenderer.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/legend/ContinuousLegendPanel.java
M
work-swing-impl/impl/src/main/java/org/cytoscape/work/internal/tunables/BoundedHandler.java
Log Message:
-----------
Merge branch 'develop' into feature/renderer-async
Commit: 544671c3f3bc26980af6d54b36809fe2f7244e16
https://github.com/cytoscape/cytoscape-impl/commit/544671c3f3bc26980af6d54b36809fe2f7244e16
Author: Mike Kucera <[email protected]>
Date: 2019-09-16 (Mon, 16 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/debug/DingDebugPanel.java
Log Message:
-----------
Add transform info to debug panel.
Commit: 1cf3dd6fcbec81f40f907885e1c55101d3bb07c3
https://github.com/cytoscape/cytoscape-impl/commit/1cf3dd6fcbec81f40f907885e1c55101d3bb07c3
Author: Mike Kucera <[email protected]>
Date: 2019-09-16 (Mon, 16 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/MainRenderComponent.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/NetworkTransform.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/RenderComponent.java
Log Message:
-----------
Fire transform changed event more reliably.
Commit: 6d5b5c3aef3cb5ac181fefbdf60a8f48b5013fb9
https://github.com/cytoscape/cytoscape-impl/commit/6d5b5c3aef3cb5ac181fefbdf60a8f48b5013fb9
Author: Mike Kucera <[email protected]>
Date: 2019-09-16 (Mon, 16 Sep 2019)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/CompositeImageCanvas.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/RenderComponent.java
Log Message:
-----------
Fix bogus zoom level if fitContent() is called before setBounds()
Compare:
https://github.com/cytoscape/cytoscape-impl/compare/1fe0c941045e...6d5b5c3aef3c
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