Branch: refs/heads/unstable
Home: https://github.com/PathwayCommons/factoid
Commit: 75f84d474e4237d7d5af7ddbdc9d1908f6d78610
https://github.com/PathwayCommons/factoid/commit/75f84d474e4237d7d5af7ddbdc9d1908f6d78610
Author: metincansiper <[email protected]>
Date: 2021-03-23 (Tue, 23 Mar 2021)
Changed paths:
M package-lock.json
M package.json
M src/client/components/home.js
M src/config.js
M src/server/routes/api/document/index.js
M src/server/routes/api/document/indra.js
A src/server/routes/api/document/related-papers-queue.js
Log Message:
-----------
Supplement db improvements (#940)
* Use only supported organisms while searching groundings of the entities
coming from biopax
* Removed a conditional console.log statement that was written for temporary
testing
* Fix too many request issue of indra queries
* While loading documents from biopax file skip the elements whose xref is not
available also skip the ones connected to such elements.
* Handle the case where response is null for fetch retry
* Add api/document/from-url end point to add new documents from a url and used
it directly from client side. Also, made a little update in error handling of
indra connecter.
* Control admin email(which is subject to change) from config file
* Handle related paper process through priority queues and made some other
improvements regarding the related papers.
* Removed a mistakenly added char
* Skip the interaction when grounding search returns no result for any of its
entities. Also, trash the doc if there is no valid interaction in it.
* Call deleteTableRows function instead of trashing document when it has no
valid interaction (in case of creating docs from biopax file)
* Delete the secret from database while removing the documents with no valid
interaction
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