Branch: refs/heads/iss937_interaction-info
Home: https://github.com/PathwayCommons/factoid
Commit: adbd0ccf2c1bc5b60e2c9b167e616eb66f7f6402
https://github.com/PathwayCommons/factoid/commit/adbd0ccf2c1bc5b60e2c9b167e616eb66f7f6402
Author: Jeffrey Wong <[email protected]>
Date: 2021-03-22 (Mon, 22 Mar 2021)
Changed paths:
M Dockerfile
M entrypoint.sh
Log Message:
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Move the npm build command to the entrypoint, so it recognizes the
environment at that time
Commit: adf338124371357a897a482848ba3ea6deffd6e2
https://github.com/PathwayCommons/factoid/commit/adf338124371357a897a482848ba3ea6deffd6e2
Author: Jeffrey Wong <[email protected]>
Date: 2021-03-24 (Wed, 24 Mar 2021)
Changed paths:
M src/config.js
Log Message:
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Merge branch 'unstable' into iss953_missing-doi
Commit: e6597d04613d7838b97785af71b076ab2ac2f889
https://github.com/PathwayCommons/factoid/commit/e6597d04613d7838b97785af71b076ab2ac2f889
Author: Jeffrey Wong <[email protected]>
Date: 2021-03-24 (Wed, 24 Mar 2021)
Changed paths:
M src/client/components/editor/info-panel.js
Log Message:
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Check for doi and adjust accordingly
Commit: 3371008cc06657e0ce4da18fa5f8279c6d5fc68f
https://github.com/PathwayCommons/factoid/commit/3371008cc06657e0ce4da18fa5f8279c6d5fc68f
Author: Jeffrey <[email protected]>
Date: 2021-03-31 (Wed, 31 Mar 2021)
Changed paths:
M Dockerfile
M entrypoint.sh
Log Message:
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Merge pull request #952 from PathwayCommons/iss951_docker-build-baseUrl
Docker: environment variables in client-side assets
Commit: dade355695233149d7ac71dca57cf405952ab7fb
https://github.com/PathwayCommons/factoid/commit/dade355695233149d7ac71dca57cf405952ab7fb
Author: Jeffrey Wong <[email protected]>
Date: 2021-04-05 (Mon, 05 Apr 2021)
Changed paths:
M src/client/components/element-info/entity-info.js
Log Message:
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Show related papers for complex
Commit: bfcc04246a5533f089c233f74577907de7835f1a
https://github.com/PathwayCommons/factoid/commit/bfcc04246a5533f089c233f74577907de7835f1a
Author: Max Franz <[email protected]>
Date: 2021-04-06 (Tue, 06 Apr 2021)
Changed paths:
M src/client/components/element-info/entity-info.js
Log Message:
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Merge pull request #963 from PathwayCommons/iss960_complex-relatedPapers
Show related papers for complexes
Commit: 12a6768747cc441a45b748d6cf3cdd9d5ca65efb
https://github.com/PathwayCommons/factoid/commit/12a6768747cc441a45b748d6cf3cdd9d5ca65efb
Author: Max Franz <[email protected]>
Date: 2021-04-14 (Wed, 14 Apr 2021)
Changed paths:
M src/styles/editor/editor.css
Log Message:
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Author attribution overlaps the share button #958
Commit: f2c00028a5cf4c6fb3f78b75ba39dc3d4ae8d5ca
https://github.com/PathwayCommons/factoid/commit/f2c00028a5cf4c6fb3f78b75ba39dc3d4ae8d5ca
Author: Max Franz <[email protected]>
Date: 2021-04-14 (Wed, 14 Apr 2021)
Changed paths:
M src/client/components/editor/info-panel.js
Log Message:
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Merge pull request #955 from PathwayCommons/iss953_missing-doi
InfoPanel: Check for doi
Commit: 6fbffb2375db34fcc42ba30e812b2a9dedd28251
https://github.com/PathwayCommons/factoid/commit/6fbffb2375db34fcc42ba30e812b2a9dedd28251
Author: Max Franz <[email protected]>
Date: 2021-04-21 (Wed, 21 Apr 2021)
Changed paths:
M src/styles/editor/editor.css
Log Message:
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Merge pull request #964 from PathwayCommons/share-credit-overlap-958
Author attribution overlaps the share button
Commit: 8fd50e7eb9bac2541a14e9133c512e468484e93a
https://github.com/PathwayCommons/factoid/commit/8fd50e7eb9bac2541a14e9133c512e468484e93a
Author: Jeffrey Wong <[email protected]>
Date: 2021-05-05 (Wed, 05 May 2021)
Changed paths:
M package-lock.json
M package.json
Log Message:
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0.15.0
Commit: e1f467eb8a0e68ea229777b90c61aeddd56a9378
https://github.com/PathwayCommons/factoid/commit/e1f467eb8a0e68ea229777b90c61aeddd56a9378
Author: Jeffrey <[email protected]>
Date: 2021-05-05 (Wed, 05 May 2021)
Changed paths:
M package-lock.json
M package.json
Log Message:
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Merge pull request #968 from PathwayCommons/v0.15.0
Version 0.15.0
Commit: f799821f320c06c93f2472962b6ed88bef1b2ac0
https://github.com/PathwayCommons/factoid/commit/f799821f320c06c93f2472962b6ed88bef1b2ac0
Author: Jeffrey Wong <[email protected]>
Date: 2021-05-07 (Fri, 07 May 2021)
Changed paths:
M src/server/routes/api/document/index.js
Log Message:
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Add back the deleted code for emailing a newly signed up user. Also add back
code to update related papers on signup
Commit: 0c18866dfb11742ba5d60684b1bc3e7e3537aaa5
https://github.com/PathwayCommons/factoid/commit/0c18866dfb11742ba5d60684b1bc3e7e3537aaa5
Author: Jeffrey Wong <[email protected]>
Date: 2021-05-07 (Fri, 07 May 2021)
Changed paths:
M src/client/components/element-info/entity-info.js
Log Message:
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Directly force database name into short synonym field
Commit: 66c991619dccd5b6695009db09af226956eafafe
https://github.com/PathwayCommons/factoid/commit/66c991619dccd5b6695009db09af226956eafafe
Author: Jeffrey Wong <[email protected]>
Date: 2021-05-10 (Mon, 10 May 2021)
Changed paths:
M src/client/components/element-info/entity-info.js
Log Message:
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Add (remove) the name to (from) the match
Commit: 0bb39d57cc60cd06b44ffbe767ba6e727df20440
https://github.com/PathwayCommons/factoid/commit/0bb39d57cc60cd06b44ffbe767ba6e727df20440
Author: Jeffrey Wong <[email protected]>
Date: 2021-05-10 (Mon, 10 May 2021)
Changed paths:
M src/client/components/element-info/entity-info.js
Log Message:
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Comments describing logic for dealing with match name
Commit: a155a7ca0e8c2a7135fb8dfa4f3100296a710711
https://github.com/PathwayCommons/factoid/commit/a155a7ca0e8c2a7135fb8dfa4f3100296a710711
Author: Jeffrey <[email protected]>
Date: 2021-05-11 (Tue, 11 May 2021)
Changed paths:
M src/server/routes/api/document/index.js
Log Message:
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Merge pull request #974 from PathwayCommons/iss973_signup-email-addback
Signup: Email author and update related papers.
Commit: d2a00eff1aefc9e86127d478ad8b3f9c80adeb31
https://github.com/PathwayCommons/factoid/commit/d2a00eff1aefc9e86127d478ad8b3f9c80adeb31
Author: Jeffrey Wong <[email protected]>
Date: 2021-05-12 (Wed, 12 May 2021)
Changed paths:
M src/client/components/element-info/entity-info.js
Log Message:
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Compare label to match names in a case-insensitive manner
Commit: 5234a1adbe16fcb0eae4a18f942f11a99234d3b8
https://github.com/PathwayCommons/factoid/commit/5234a1adbe16fcb0eae4a18f942f11a99234d3b8
Author: Jeffrey <[email protected]>
Date: 2021-05-13 (Thu, 13 May 2021)
Changed paths:
M src/client/components/element-info/entity-info.js
Log Message:
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Merge pull request #976 from PathwayCommons/iss969_keep-name
Retain the data source's 'name' in grounding tooltip entry
Commit: 9a02fac6b114932cf5172f5fbb737a4bbb393b2e
https://github.com/PathwayCommons/factoid/commit/9a02fac6b114932cf5172f5fbb737a4bbb393b2e
Author: Jeffrey Wong <[email protected]>
Date: 2021-05-14 (Fri, 14 May 2021)
Changed paths:
M package-lock.json
M package.json
Log Message:
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0.15.1
Commit: 0b46f70d75285a343946e2d8274ecc2ddba9b62c
https://github.com/PathwayCommons/factoid/commit/0b46f70d75285a343946e2d8274ecc2ddba9b62c
Author: Jeffrey <[email protected]>
Date: 2021-05-14 (Fri, 14 May 2021)
Changed paths:
M package-lock.json
M package.json
Log Message:
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Merge pull request #978 from PathwayCommons/v0.15.1
0.15.1
Commit: 54238f345cc1012a4d1ec87627757af77b4d16a5
https://github.com/PathwayCommons/factoid/commit/54238f345cc1012a4d1ec87627757af77b4d16a5
Author: Max Franz <[email protected]>
Date: 2021-05-25 (Tue, 25 May 2021)
Changed paths:
M LICENSE
A PRIVACY_POLICY.md
M README.md
M src/client/components/home.js
Log Message:
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Document Data License & Privacy Policy
Ref #972
Commit: 390141b2cad463c3edf98b42a662653308517ec2
https://github.com/PathwayCommons/factoid/commit/390141b2cad463c3edf98b42a662653308517ec2
Author: Max Franz <[email protected]>
Date: 2021-05-31 (Mon, 31 May 2021)
Changed paths:
M LICENSE
A PRIVACY_POLICY.md
M README.md
M src/client/components/home.js
Log Message:
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Merge pull request #979 from PathwayCommons/licensing-etc
Document Data License & Privacy Policy
Commit: e29dbc6e6530ee969af6b412ef30ca066f25dde1
https://github.com/PathwayCommons/factoid/commit/e29dbc6e6530ee969af6b412ef30ca066f25dde1
Author: Max Franz <[email protected]>
Date: 2021-06-02 (Wed, 02 Jun 2021)
Changed paths:
M README.md
Log Message:
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Update README.md
Commit: 95ac0bca3edb82c7629a4155db52a9101d3ce63d
https://github.com/PathwayCommons/factoid/commit/95ac0bca3edb82c7629a4155db52a9101d3ce63d
Author: Jeffrey <[email protected]>
Date: 2021-06-02 (Wed, 02 Jun 2021)
Changed paths:
M README.md
Log Message:
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Update README.md
Zenodo badge
Commit: 8dfed275b2ba363f7299634cedae119cf5291f62
https://github.com/PathwayCommons/factoid/commit/8dfed275b2ba363f7299634cedae119cf5291f62
Author: Max Franz <[email protected]>
Date: 2021-06-02 (Wed, 02 Jun 2021)
Changed paths:
M README.md
Log Message:
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Merge pull request #981 from PathwayCommons/zenodo-badge
Update README.md
Commit: 517cd89da813d007097777e059b616b6258b871b
https://github.com/PathwayCommons/factoid/commit/517cd89da813d007097777e059b616b6258b871b
Author: Max Franz <[email protected]>
Date: 2021-06-02 (Wed, 02 Jun 2021)
Changed paths:
M README.md
Log Message:
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Update README.md
Commit: 825138c5bbd67a5c384fa7663cef7b111f700277
https://github.com/PathwayCommons/factoid/commit/825138c5bbd67a5c384fa7663cef7b111f700277
Author: Jeffrey Wong <[email protected]>
Date: 2021-06-02 (Wed, 02 Jun 2021)
Changed paths:
M src/server/routes/api/document/pubmed/index.js
Log Message:
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Exclude retractions from the search hits.
Commit: fa0038915d9c5d0c61d1d1c851256c5683739a22
https://github.com/PathwayCommons/factoid/commit/fa0038915d9c5d0c61d1d1c851256c5683739a22
Author: Max Franz <[email protected]>
Date: 2021-06-07 (Mon, 07 Jun 2021)
Changed paths:
M src/server/routes/api/document/pubmed/index.js
Log Message:
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Merge pull request #982 from PathwayCommons/iss848_exclude-retractions
Article search should exclude retractions from the hits
Commit: bef11870c9574cc882d13746a0fd9c43fdba972a
https://github.com/PathwayCommons/factoid/commit/bef11870c9574cc882d13746a0fd9c43fdba972a
Author: Jeffrey Wong <[email protected]>
Date: 2021-06-08 (Tue, 08 Jun 2021)
Changed paths:
M package-lock.json
M package.json
A src/client/components/search-component.js
Log Message:
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Added initial version of Search class
Commit: 072d76dea06b30a23559e8799d9901d606f3985f
https://github.com/PathwayCommons/factoid/commit/072d76dea06b30a23559e8799d9901d606f3985f
Author: Jeffrey Wong <[email protected]>
Date: 2021-06-08 (Tue, 08 Jun 2021)
Changed paths:
R src/client/components/search-component.js
A src/client/document-search.js
Log Message:
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An abstract search class and basic document search class
Commit: 1f1cb8ab6e446ef7c99beee00915f06feddb8b1c
https://github.com/PathwayCommons/factoid/commit/1f1cb8ab6e446ef7c99beee00915f06feddb8b1c
Author: Jeffrey Wong <[email protected]>
Date: 2021-06-08 (Tue, 08 Jun 2021)
Changed paths:
M src/client/document-search.js
Log Message:
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JS doc added
Commit: 5ed0f462f39e34200aca7d786b99d2f41fbd5337
https://github.com/PathwayCommons/factoid/commit/5ed0f462f39e34200aca7d786b99d2f41fbd5337
Author: Jeffrey Wong <[email protected]>
Date: 2021-06-08 (Tue, 08 Jun 2021)
Changed paths:
M src/client/document-search.js
Log Message:
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- return the full (raw) indexed documents in search hits
- make the entire list of documents available
Commit: e23ffb972dc15c5613003129423f2ed2f925d860
https://github.com/PathwayCommons/factoid/commit/e23ffb972dc15c5613003129423f2ed2f925d860
Author: Jeffrey Wong <[email protected]>
Date: 2021-06-08 (Tue, 08 Jun 2021)
Changed paths:
M src/client/document-search.js
Log Message:
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Move fetch into base-class
Commit: 264b93c45ea53fb77b5d6c27d60cf93ea712b118
https://github.com/PathwayCommons/factoid/commit/264b93c45ea53fb77b5d6c27d60cf93ea712b118
Author: Max Franz <[email protected]>
Date: 2021-06-09 (Wed, 09 Jun 2021)
Changed paths:
M package-lock.json
M package.json
A src/client/document-search.js
Log Message:
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Merge pull request #984 from PathwayCommons/iss863_mini-search
A class for client-side Document search
Commit: 815ca3537af288da60e22d450337451aaa289151
https://github.com/PathwayCommons/factoid/commit/815ca3537af288da60e22d450337451aaa289151
Author: Jeffrey Wong <[email protected]>
Date: 2021-06-11 (Fri, 11 Jun 2021)
Changed paths:
M Dockerfile
M LICENSE
A PRIVACY_POLICY.md
M README.md
M entrypoint.sh
M package-lock.json
M package.json
M src/client/components/editor/info-panel.js
M src/client/components/element-info/entity-info.js
M src/client/components/home.js
A src/client/document-search.js
M src/server/routes/api/document/index.js
M src/server/routes/api/document/pubmed/index.js
M src/styles/editor/editor.css
Log Message:
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Merging with Unstable and resolving conflicts
Compare:
https://github.com/PathwayCommons/factoid/compare/e0b4cf2db1a0...815ca3537af2
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