Branch: refs/heads/feature/search2
Home: https://github.com/cytoscape/cytoscape-impl
Commit: 41a981da8d584737f2c9fce41bee31224bae5b4a
https://github.com/cytoscape/cytoscape-impl/commit/41a981da8d584737f2c9fce41bee31224bae5b4a
Author: Mike Kucera <[email protected]>
Date: 2022-01-25 (Tue, 25 Jan 2022)
Changed paths:
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/CaseInsensitiveWhitespaceAnalyzer.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/IndexCreateTask.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/SearchManager.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/search/SearchTask.java
Log Message:
-----------
Use custom analyzer, use TextField.
Commit: d625260cc293b35742ed71da3aff5d43518ef2c3
https://github.com/cytoscape/cytoscape-impl/commit/d625260cc293b35742ed71da3aff5d43518ef2c3
Author: Mike Kucera <[email protected]>
Date: 2022-01-25 (Tue, 25 Jan 2022)
Changed paths:
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/SearchManager.java
A
search2-impl/src/main/java/org/cytoscape/search/internal/search/NodeAndEdgeSelectorTask.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/search/SearchTask.java
M search2-impl/src/main/java/org/cytoscape/search/internal/ui/SearchBox.java
Log Message:
-----------
Select task.
Commit: 9cc413140820be3f9bebb9f04f6c0540173be09d
https://github.com/cytoscape/cytoscape-impl/commit/9cc413140820be3f9bebb9f04f6c0540173be09d
Author: Mike Kucera <[email protected]>
Date: 2022-01-26 (Wed, 26 Jan 2022)
Changed paths:
M
search2-impl/src/main/java/org/cytoscape/search/internal/search/SearchResults.java
A
search2-impl/src/test/java/org/cytoscape/search/internal/AttributeFieldsTest.java
A
search2-impl/src/test/java/org/cytoscape/search/internal/NodeAndEdgeSelectorTaskTest.java
A
search2-impl/src/test/java/org/cytoscape/search/internal/SearchResultsTest.java
Log Message:
-----------
Update basic JUnits for search.
Commit: 4dd55bcfad2925f320e8fac468307a169957f2a9
https://github.com/cytoscape/cytoscape-impl/commit/4dd55bcfad2925f320e8fac468307a169957f2a9
Author: Mike Kucera <[email protected]>
Date: 2022-01-31 (Mon, 31 Jan 2022)
Changed paths:
M search2-impl/pom.xml
M search2-impl/src/main/java/org/cytoscape/search/internal/CyActivator.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/IndexCreateTask.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/SearchManager.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/search/SearchResults.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/search/SearchTask.java
A
search2-impl/src/test/java/org/cytoscape/search/internal/LogSilenceRule.java
A search2-impl/src/test/java/org/cytoscape/search/internal/QueryTest.java
Log Message:
-----------
Start of JUnits for search queries.
Commit: cfeb9aa8635594c9df692db193ec98c095c351a9
https://github.com/cytoscape/cytoscape-impl/commit/cfeb9aa8635594c9df692db193ec98c095c351a9
Author: Mike Kucera <[email protected]>
Date: 2022-01-31 (Mon, 31 Jan 2022)
Changed paths:
M search2-impl/src/test/java/org/cytoscape/search/internal/QueryTest.java
Log Message:
-----------
Wildcard query tests and some refactoring.
Commit: 8dc47fefc4e510b3c5b8287de6cdeaa9f08a3481
https://github.com/cytoscape/cytoscape-impl/commit/8dc47fefc4e510b3c5b8287de6cdeaa9f08a3481
Author: Scooter Morris <[email protected]>
Date: 2022-02-03 (Thu, 03 Feb 2022)
Changed paths:
M app-impl/src/main/java/org/cytoscape/app/internal/task/DisableTask.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/EnableTask.java
M
app-impl/src/main/java/org/cytoscape/app/internal/task/InformationTask.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/InstallTask.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/StatusTask.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/UninstallTask.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/UpdateTask.java
Log Message:
-----------
Change JSON returns when there is an error to return {'error':"msg"}
Commit: cc5e6f8fac83b3399169caa6cb64339f5e99cff5
https://github.com/cytoscape/cytoscape-impl/commit/cc5e6f8fac83b3399169caa6cb64339f5e99cff5
Author: Mike Kucera <[email protected]>
Date: 2022-02-14 (Mon, 14 Feb 2022)
Changed paths:
M app-impl/src/main/java/org/cytoscape/app/internal/task/DisableTask.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/EnableTask.java
M
app-impl/src/main/java/org/cytoscape/app/internal/task/InformationTask.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/InstallTask.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/StatusTask.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/UninstallTask.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/UpdateTask.java
Log Message:
-----------
Merge branch 'develop' into feature/search2
Commit: f30b2f9e8d2c0a994ce97b11953821ddffd602ab
https://github.com/cytoscape/cytoscape-impl/commit/f30b2f9e8d2c0a994ce97b11953821ddffd602ab
Author: Mike Kucera <[email protected]>
Date: 2022-02-15 (Tue, 15 Feb 2022)
Changed paths:
R
search2-impl/src/main/java/org/cytoscape/search/internal/index/IndexCreateTask.java
A
search2-impl/src/main/java/org/cytoscape/search/internal/index/NetworkIndexer.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/SearchManager.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/search/SearchResults.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/search/SearchTask.java
M search2-impl/src/test/java/org/cytoscape/search/internal/QueryTest.java
Log Message:
-----------
Index network in the background.
Commit: 0ca3cb050cac786e7126cf2c51d84e9629c34acf
https://github.com/cytoscape/cytoscape-impl/commit/0ca3cb050cac786e7126cf2c51d84e9629c34acf
Author: Mike Kucera <[email protected]>
Date: 2022-02-18 (Fri, 18 Feb 2022)
Changed paths:
M search2-impl/src/main/java/org/cytoscape/search/internal/CyActivator.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/NetworkIndexer.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/SearchManager.java
A
search2-impl/src/main/java/org/cytoscape/search/internal/progress/DiscreteProgressMonitor.java
A
search2-impl/src/main/java/org/cytoscape/search/internal/progress/ProgressMonitor.java
A
search2-impl/src/main/java/org/cytoscape/search/internal/progress/SubProgressMonitor.java
A
search2-impl/src/main/java/org/cytoscape/search/internal/ui/ProgressPopup.java
M search2-impl/src/main/java/org/cytoscape/search/internal/ui/SearchBox.java
Log Message:
-----------
Start of indexer progress popup.
Commit: 9536fd4b8e6d949cd9c76d58e55405ec605a4724
https://github.com/cytoscape/cytoscape-impl/commit/9536fd4b8e6d949cd9c76d58e55405ec605a4724
Author: Mike Kucera <[email protected]>
Date: 2022-02-18 (Fri, 18 Feb 2022)
Changed paths:
M search2-impl/src/main/java/org/cytoscape/search/internal/CyActivator.java
R
search2-impl/src/main/java/org/cytoscape/search/internal/index/NetworkIndexer.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/SearchManager.java
A
search2-impl/src/main/java/org/cytoscape/search/internal/index/TableIndexer.java
A
search2-impl/src/main/java/org/cytoscape/search/internal/index/TableType.java
A
search2-impl/src/main/java/org/cytoscape/search/internal/search/NetworkSearchTask.java
R
search2-impl/src/main/java/org/cytoscape/search/internal/search/SearchTask.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/ui/ProgressPopup.java
M search2-impl/src/main/java/org/cytoscape/search/internal/ui/SearchBox.java
M search2-impl/src/test/java/org/cytoscape/search/internal/QueryTest.java
Log Message:
-----------
Refactor search to be based on tables, not networks.
Commit: 474d1769938b3e77c986f9be5922a5088f8d1050
https://github.com/cytoscape/cytoscape-impl/commit/474d1769938b3e77c986f9be5922a5088f8d1050
Author: Mike Kucera <[email protected]>
Date: 2022-02-21 (Mon, 21 Feb 2022)
Changed paths:
A search2-impl/src/main/java/org/cytoscape/search/internal/index/Index.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/SearchManager.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/TableIndexer.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/search/NetworkSearchTask.java
M search2-impl/src/test/java/org/cytoscape/search/internal/QueryTest.java
Log Message:
-----------
Start of support of modified rows. Refactor IndexWriter creation.
Commit: 440fc541f1757e86c1994b256935dea5557c647e
https://github.com/cytoscape/cytoscape-impl/commit/440fc541f1757e86c1994b256935dea5557c647e
Author: Mike Kucera <[email protected]>
Date: 2022-02-22 (Tue, 22 Feb 2022)
Changed paths:
M search2-impl/src/main/java/org/cytoscape/search/internal/index/Index.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/SearchManager.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/TableIndexer.java
M
search2-impl/src/main/java/org/cytoscape/search/internal/search/NetworkSearchTask.java
M search2-impl/src/test/java/org/cytoscape/search/internal/QueryTest.java
Log Message:
-----------
Fix issue with wrong result after update.
Commit: 101e74c1c6ceaac80cf73ab13e781306067b05c1
https://github.com/cytoscape/cytoscape-impl/commit/101e74c1c6ceaac80cf73ab13e781306067b05c1
Author: Mike Kucera <[email protected]>
Date: 2022-02-22 (Tue, 22 Feb 2022)
Changed paths:
M
search2-impl/src/main/java/org/cytoscape/search/internal/search/NetworkSearchTask.java
Log Message:
-----------
Use ConstantScoreQuery
Commit: 8efec1ba1bad16b83e0a32ad614eec8a02cd219b
https://github.com/cytoscape/cytoscape-impl/commit/8efec1ba1bad16b83e0a32ad614eec8a02cd219b
Author: Mike Kucera <[email protected]>
Date: 2022-02-22 (Tue, 22 Feb 2022)
Changed paths:
M
search2-impl/src/main/java/org/cytoscape/search/internal/index/SearchManager.java
M search2-impl/src/test/java/org/cytoscape/search/internal/QueryTest.java
Log Message:
-----------
Don't index root network tables.
Compare:
https://github.com/cytoscape/cytoscape-impl/compare/4aea5270210c...8efec1ba1bad
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