Branch: refs/heads/feature/opencl
Home: https://github.com/cytoscape/cytoscape-impl
Commit: 6a084a19c0820f95d21644fd3d6aefb46ae60cc5
https://github.com/cytoscape/cytoscape-impl/commit/6a084a19c0820f95d21644fd3d6aefb46ae60cc5
Author: Yihang Xin <[email protected]>
Date: 2022-10-05 (Wed, 05 Oct 2022)
Changed paths:
M app-impl/src/main/java/org/cytoscape/app/internal/CyActivator.java
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M
app-impl/src/main/java/org/cytoscape/app/internal/manager/LaunchManager.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
M
app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTaskFactory.java
Log Message:
-----------
fix panel switch
Commit: 2fac2d5c22c21dee7956c926f828542c241a97bc
https://github.com/cytoscape/cytoscape-impl/commit/2fac2d5c22c21dee7956c926f828542c241a97bc
Author: Mike Kucera <[email protected]>
Date: 2022-10-07 (Fri, 07 Oct 2022)
Changed paths:
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/VizMapperMediator.java
Log Message:
-----------
Prevent table column mapping editor from closing when creating mapping.
Commit: de16f93283489cb29f6f3b7b3cf743df59be0a5e
https://github.com/cytoscape/cytoscape-impl/commit/de16f93283489cb29f6f3b7b3cf743df59be0a5e
Author: Mike Kucera <[email protected]>
Date: 2022-10-07 (Fri, 07 Oct 2022)
Changed paths:
M
core-task-impl/src/main/java/org/cytoscape/task/internal/export/network/GenerateNetworkViewsTask.java
Log Message:
-----------
Code reformat.
Commit: 1606c1677eb501f725f5536aac09e199d23ac080
https://github.com/cytoscape/cytoscape-impl/commit/1606c1677eb501f725f5536aac09e199d23ac080
Author: Mike Kucera <[email protected]>
Date: 2022-10-07 (Fri, 07 Oct 2022)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
Log Message:
-----------
Add edge count check to selection lasso.
Commit: 58238fdb68bda1d8e570165d509ebeb28e9f8859
https://github.com/cytoscape/cytoscape-impl/commit/58238fdb68bda1d8e570165d509ebeb28e9f8859
Author: Mike Kucera <[email protected]>
Date: 2022-10-20 (Thu, 20 Oct 2022)
Changed paths:
M
core-task-impl/src/main/java/org/cytoscape/task/internal/hide/AbstractUnHideTaskFactory.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/NetworkImageFactoryImpl.java
M filter2-impl/src/main/java/org/cytoscape/filter/internal/ModelMonitor.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkViewContainer.java
M
viewmodel-impl/impl/src/main/java/org/cytoscape/view/model/internal/base/CyViewBase.java
M
viewmodel-impl/impl/src/main/java/org/cytoscape/view/model/internal/base/ViewLock.java
M
viewmodel-impl/impl/src/main/java/org/cytoscape/view/model/internal/network/CyNetworkViewImpl.java
M
viewmodel-impl/impl/src/main/java/org/cytoscape/view/model/internal/table/CyTableViewImpl.java
Log Message:
-----------
CYTOSCAPE-13010 Use ReentrantLock in view model.
Commit: 8939895533c7c50cdd62876dfa6f56fc1009a8b3
https://github.com/cytoscape/cytoscape-impl/commit/8939895533c7c50cdd62876dfa6f56fc1009a8b3
Author: Mike Kucera <[email protected]>
Date: 2022-10-22 (Sat, 22 Oct 2022)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/DVisualLexicon.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
Log Message:
-----------
Make updateView() non-blocking.
Commit: e9aedec1bf2d810387b30bc4e96030e231243c9a
https://github.com/cytoscape/cytoscape-impl/commit/e9aedec1bf2d810387b30bc4e96030e231243c9a
Author: Mike Kucera <[email protected]>
Date: 2022-10-28 (Fri, 28 Oct 2022)
Changed paths:
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/filters/degree/DegreeFilterViewFactory.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/filters/degree/DegreeRange.java
Log Message:
-----------
CYTOSCAPE-13011 Fix slider range in Degree filter.
Commit: b070c249296de767d2701a6c7ded329ac4292747
https://github.com/cytoscape/cytoscape-impl/commit/b070c249296de767d2701a6c7ded329ac4292747
Author: Yihang Xin <[email protected]>
Date: 2022-10-30 (Sun, 30 Oct 2022)
Changed paths:
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
Log Message:
-----------
Fix update apps error
Commit: 3f1222c1083b104636b5f03b28de205d025f996b
https://github.com/cytoscape/cytoscape-impl/commit/3f1222c1083b104636b5f03b28de205d025f996b
Author: Yihang Xin <[email protected]>
Date: 2022-11-01 (Tue, 01 Nov 2022)
Changed paths:
A app-impl/src/main/resources/README.md
Log Message:
-----------
Create README.md
Commit: b2ba6e3d199fc0e31ca82c6e892dfddc20ec0f14
https://github.com/cytoscape/cytoscape-impl/commit/b2ba6e3d199fc0e31ca82c6e892dfddc20ec0f14
Author: Yihang Xin <[email protected]>
Date: 2022-11-01 (Tue, 01 Nov 2022)
Changed paths:
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
A app-impl/src/main/resources/AppManager/AppManager.html
R app-impl/src/main/resources/README.md
R app-impl/src/main/resources/appmanager.html
R app-impl/src/main/resources/appmanager.js
R app-impl/src/main/resources/test.html
Log Message:
-----------
change appstore web page file location
Commit: d9f1d1a336c397035d9d4949f081a18c236c4b8b
https://github.com/cytoscape/cytoscape-impl/commit/d9f1d1a336c397035d9d4949f081a18c236c4b8b
Author: Yihang Xin <[email protected]>
Date: 2022-11-01 (Tue, 01 Nov 2022)
Changed paths:
A app-impl/README.md
Log Message:
-----------
Create README.md
Commit: 50980ffaf979a388395c45c60b3e97a7db992b79
https://github.com/cytoscape/cytoscape-impl/commit/50980ffaf979a388395c45c60b3e97a7db992b79
Author: Yihang Xin <[email protected]>
Date: 2022-11-01 (Tue, 01 Nov 2022)
Changed paths:
M app-impl/README.md
Log Message:
-----------
Update README.md
Commit: c0c16bed0b60f83766f58a838fbd6c0024f19fc0
https://github.com/cytoscape/cytoscape-impl/commit/c0c16bed0b60f83766f58a838fbd6c0024f19fc0
Author: Yihang Xin <[email protected]>
Date: 2022-11-02 (Wed, 02 Nov 2022)
Changed paths:
M app-impl/README.md
Log Message:
-----------
Update README.md
Commit: 5052102a9c1aebbe1b86c57a9681b5f4fc0bc196
https://github.com/cytoscape/cytoscape-impl/commit/5052102a9c1aebbe1b86c57a9681b5f4fc0bc196
Author: Yihang Xin <[email protected]>
Date: 2022-11-02 (Wed, 02 Nov 2022)
Changed paths:
M app-impl/README.md
Log Message:
-----------
Update README.md
Commit: 6cbc3a576cfd31e98d3165ddf8c5df1528be4788
https://github.com/cytoscape/cytoscape-impl/commit/6cbc3a576cfd31e98d3165ddf8c5df1528be4788
Author: Yihang Xin <[email protected]>
Date: 2022-11-07 (Mon, 07 Nov 2022)
Changed paths:
M app-impl/src/main/resources/AppManager/AppManager.html
Log Message:
-----------
add new core apps
Commit: 4e8110f669dd3542957d6c90600a56dcc0a5c8fc
https://github.com/cytoscape/cytoscape-impl/commit/4e8110f669dd3542957d6c90600a56dcc0a5c8fc
Author: Yihang Xin <[email protected]>
Date: 2022-11-07 (Mon, 07 Nov 2022)
Changed paths:
A app-impl/README.md
Log Message:
-----------
Merge branch 'develop' of github.com:cytoscape/cytoscape-impl into develop
Commit: 377765f2fe17c2bbe743b65f47a57b674211fac3
https://github.com/cytoscape/cytoscape-impl/commit/377765f2fe17c2bbe743b65f47a57b674211fac3
Author: Yihang Xin <[email protected]>
Date: 2022-11-08 (Tue, 08 Nov 2022)
Changed paths:
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
Log Message:
-----------
add new core apps
Commit: b007fba0cd37046cf35be4f2fabd78497945b54c
https://github.com/cytoscape/cytoscape-impl/commit/b007fba0cd37046cf35be4f2fabd78497945b54c
Author: Christian Lopes <[email protected]>
Date: 2022-11-14 (Mon, 14 Nov 2022)
Changed paths:
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/util/ViewUtil.java
Log Message:
-----------
Better resizing of the CytoPanel's drop-down icons when the original icon is
a TextIcon (not pixelated anymore).
Commit: e56467a389b3f50c02826af38a97faee5eb8d203
https://github.com/cytoscape/cytoscape-impl/commit/e56467a389b3f50c02826af38a97faee5eb8d203
Author: Christian Lopes <[email protected]>
Date: 2022-11-14 (Mon, 14 Nov 2022)
Changed paths:
M app-impl/pom.xml
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
A app-impl/src/main/java/org/cytoscape/app/internal/util/IconUtil.java
A app-impl/src/main/resources/fonts/app-manager.ttf
Log Message:
-----------
Adds an icon to the App Manager CytoPanel (requires new changes proposed to
CyBrowser) -- CYTOSCAPE-13005
Commit: 107b601ceb5d7c74d21c0d14962c6b496a1cde09
https://github.com/cytoscape/cytoscape-impl/commit/107b601ceb5d7c74d21c0d14962c6b496a1cde09
Author: Christian Lopes <[email protected]>
Date: 2022-11-15 (Tue, 15 Nov 2022)
Changed paths:
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeDesktop.java
Log Message:
-----------
Making sure the sidebar buttons have the same height, no matter their icon
sizes.
Commit: 1c0ee03609042ce2a805a723254ed121269fd14b
https://github.com/cytoscape/cytoscape-impl/commit/1c0ee03609042ce2a805a723254ed121269fd14b
Author: Christian Lopes <[email protected]>
Date: 2022-11-15 (Tue, 15 Nov 2022)
Changed paths:
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeDesktop.java
Log Message:
-----------
Minor code cleanup only.
Commit: 345aa0b16ed82f273eeb8a52ec9b3194043f601a
https://github.com/cytoscape/cytoscape-impl/commit/345aa0b16ed82f273eeb8a52ec9b3194043f601a
Author: Yihang Xin <[email protected]>
Date: 2022-11-16 (Wed, 16 Nov 2022)
Changed paths:
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M app-impl/src/main/java/org/cytoscape/app/internal/manager/AppManager.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
M app-impl/src/main/resources/AppManager/AppManager.html
A app-impl/src/main/resources/AppManager/img/adn-brands.png
A app-impl/src/main/resources/AppManager/img/adn-brands.svg
A app-impl/src/main/resources/AppManager/img/hamburger.ai
A app-impl/src/main/resources/AppManager/img/hamburger.png
A app-impl/src/main/resources/AppManager/img/logo.png
A app-impl/src/main/resources/AppManager/img/logo_mgr.ai
A app-impl/src/main/resources/AppManager/img/logo_mgr_large.png
A app-impl/src/main/resources/AppManager/img/search.png
A app-impl/src/main/resources/AppManager/img/tab.png
A app-impl/src/main/resources/AppManager/img/trash.png
A app-impl/src/main/resources/AppManager/img/trash2.png
A app-impl/src/main/resources/AppManager/img/update1.png
A app-impl/src/main/resources/AppManager/img/update2.png
A app-impl/src/main/resources/AppManager/img/update_og.png
R app-impl/src/main/resources/img/adn-brands.png
R app-impl/src/main/resources/img/adn-brands.svg
R app-impl/src/main/resources/img/hamburger.ai
R app-impl/src/main/resources/img/hamburger.png
R app-impl/src/main/resources/img/logo.png
R app-impl/src/main/resources/img/logo_mgr.ai
R app-impl/src/main/resources/img/logo_mgr_large.png
R app-impl/src/main/resources/img/search.png
R app-impl/src/main/resources/img/tab.png
R app-impl/src/main/resources/img/trash.png
R app-impl/src/main/resources/img/trash2.png
R app-impl/src/main/resources/img/update1.png
R app-impl/src/main/resources/img/update2.png
R app-impl/src/main/resources/img/update_og.png
Log Message:
-----------
open in native browser
Commit: 6f0a8fd4bc7b64814c4d7749460cab56b34fe010
https://github.com/cytoscape/cytoscape-impl/commit/6f0a8fd4bc7b64814c4d7749460cab56b34fe010
Author: Yihang Xin <[email protected]>
Date: 2022-11-16 (Wed, 16 Nov 2022)
Changed paths:
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/util/ViewUtil.java
Log Message:
-----------
Merge branch 'develop' of github.com:cytoscape/cytoscape-impl into develop
Commit: 14641db5374884c2a133aee6b3fbadf33f3df6a2
https://github.com/cytoscape/cytoscape-impl/commit/14641db5374884c2a133aee6b3fbadf33f3df6a2
Author: Yihang Xin <[email protected]>
Date: 2022-11-17 (Thu, 17 Nov 2022)
Changed paths:
M
swing-application-impl/src/main/java/org/cytoscape/internal/model/SelectionMode.java
Log Message:
-----------
CYTOSCPAE-13015 Fix
Commit: b4b1f0205a4e15a02cc2ddd56991d4de8c44336d
https://github.com/cytoscape/cytoscape-impl/commit/b4b1f0205a4e15a02cc2ddd56991d4de8c44336d
Author: Christian Lopes <[email protected]>
Date: 2022-11-17 (Thu, 17 Nov 2022)
Changed paths:
M
custom-graphics-internal/src/main/java/org/cytoscape/cg/internal/editor/CyCustomGraphicsValueEditor.java
Log Message:
-----------
The CG ValueEditor now returns a NullCustomGraphics if the current Image is
no longer registered in the CustomGraphicsManager -- CYTOSCAPE-13016
Commit: 46f2ffd41a40f6c8e82595b2bc867ce582e748da
https://github.com/cytoscape/cytoscape-impl/commit/46f2ffd41a40f6c8e82595b2bc867ce582e748da
Author: Christian Lopes <[email protected]>
Date: 2022-11-17 (Thu, 17 Nov 2022)
Changed paths:
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/EditorManagerImpl.java
Log Message:
-----------
Minor code refactoring and reformatting.
Commit: b9248b85a50d3aa4c91f0e4e81b32a9de6b95b81
https://github.com/cytoscape/cytoscape-impl/commit/b9248b85a50d3aa4c91f0e4e81b32a9de6b95b81
Author: Yihang Xin <[email protected]>
Date: 2022-11-20 (Sun, 20 Nov 2022)
Changed paths:
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
Log Message:
-----------
add app manager icon
Commit: a3fc4cbc8558df06b6227198f7025f7a4f3d901c
https://github.com/cytoscape/cytoscape-impl/commit/a3fc4cbc8558df06b6227198f7025f7a4f3d901c
Author: Yihang Xin <[email protected]>
Date: 2022-11-20 (Sun, 20 Nov 2022)
Changed paths:
M
custom-graphics-internal/src/main/java/org/cytoscape/cg/internal/editor/CyCustomGraphicsValueEditor.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/EditorManagerImpl.java
Log Message:
-----------
Merge branch 'develop' of github.com:cytoscape/cytoscape-impl into develop
Commit: 537a22fe03080f8916d40f17c9da9d0052127157
https://github.com/cytoscape/cytoscape-impl/commit/537a22fe03080f8916d40f17c9da9d0052127157
Author: Yihang Xin <[email protected]>
Date: 2022-11-21 (Mon, 21 Nov 2022)
Changed paths:
M app-impl/src/main/java/org/cytoscape/app/internal/CyActivator.java
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
M app-impl/src/main/resources/AppManager/AppManager.html
Log Message:
-----------
add appsChangedListener
Commit: 2a0523af1e05491ac1768879c743128f25ba1b41
https://github.com/cytoscape/cytoscape-impl/commit/2a0523af1e05491ac1768879c743128f25ba1b41
Author: Yihang Xin <[email protected]>
Date: 2022-11-21 (Mon, 21 Nov 2022)
Changed paths:
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M app-impl/src/main/java/org/cytoscape/app/internal/manager/AppManager.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
M app-impl/src/main/resources/AppManager/AppManager.html
Log Message:
-----------
remove redundant fireAppsChangedEvent
Commit: 531d399b2a37d7c4cdca733f0bdca857d03ce09e
https://github.com/cytoscape/cytoscape-impl/commit/531d399b2a37d7c4cdca733f0bdca857d03ce09e
Author: Yihang Xin <[email protected]>
Date: 2022-11-22 (Tue, 22 Nov 2022)
Changed paths:
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
M app-impl/src/main/resources/AppManager/AppManager.html
Log Message:
-----------
prevent reclick on disable/enable
Commit: a9ac73127da627a1c8656880a77d76c7bf6a67a2
https://github.com/cytoscape/cytoscape-impl/commit/a9ac73127da627a1c8656880a77d76c7bf6a67a2
Author: Yihang Xin <[email protected]>
Date: 2022-11-22 (Tue, 22 Nov 2022)
Changed paths:
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
M app-impl/src/main/resources/AppManager/AppManager.html
Log Message:
-----------
prevent reclick on disable/enable
Commit: 5cbc271fb432e7278ef56d09893e37eadd991fa9
https://github.com/cytoscape/cytoscape-impl/commit/5cbc271fb432e7278ef56d09893e37eadd991fa9
Author: Yihang Xin <[email protected]>
Date: 2022-11-22 (Tue, 22 Nov 2022)
Changed paths:
M
app-impl/src/main/java/org/cytoscape/app/internal/manager/LaunchManager.java
Log Message:
-----------
add delay for launchManager
Commit: a01287f7f33b3714579473bbcdeed03f3d7f60ab
https://github.com/cytoscape/cytoscape-impl/commit/a01287f7f33b3714579473bbcdeed03f3d7f60ab
Author: Christian Lopes <[email protected]>
Date: 2022-11-29 (Tue, 29 Nov 2022)
Changed paths:
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/CyActivator.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/TableImportContext.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/AttributeEditorPanel.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/PreviewTablePanel.java
Log Message:
-----------
- A column with an empty name is now set as 'Not Imported' automatically and
an error message appears bellow the 'Column Name' field--the user can only set
another "Meaning" (and import it) after typing a name.
- Fixes bug where a column could be set as a 'Key' type even though the Network
Import action should not allow KEY columns.
-- CYTOSCAPE-12997
Commit: cc3545759d399104ebf93278774c2873e4fd5ad8
https://github.com/cytoscape/cytoscape-impl/commit/cc3545759d399104ebf93278774c2873e4fd5ad8
Author: Christian Lopes <[email protected]>
Date: 2022-11-29 (Tue, 29 Nov 2022)
Changed paths:
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/util/TypeUtil.java
Log Message:
-----------
The "Meaning" of a column with an empty name is now suggested as 'Not
Imported' by default -- CYTOSCAPE-12997
Commit: d054814a2bf7bcde75126b1ae794eaa9803275a5
https://github.com/cytoscape/cytoscape-impl/commit/d054814a2bf7bcde75126b1ae794eaa9803275a5
Author: Christian Lopes <[email protected]>
Date: 2022-11-29 (Tue, 29 Nov 2022)
Changed paths:
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/util/TypeUtil.java
Log Message:
-----------
Adds "geneA" and "geneB" to the list of preferred source/target column names
-- CYTOSCAPE-12997
Commit: 11d369da1d6f803b8f2107308e1e2a18e9a6d713
https://github.com/cytoscape/cytoscape-impl/commit/11d369da1d6f803b8f2107308e1e2a18e9a6d713
Author: Christian Lopes <[email protected]>
Date: 2022-11-29 (Tue, 29 Nov 2022)
Changed paths:
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/reader/NetworkTableReader.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/ImportTableDataTask.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/LoadNetworkReaderTask.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/AttributeEditorPanel.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/ImportTablePanel.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/PreviewTablePanel.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/util/TypeUtil.java
Log Message:
-----------
Minor code refactoring and reformatting.
Commit: c6dd2bd12213d869ac920801b75324ae7078ac12
https://github.com/cytoscape/cytoscape-impl/commit/c6dd2bd12213d869ac920801b75324ae7078ac12
Author: Mike Kucera <[email protected]>
Date: 2022-12-01 (Thu, 01 Dec 2022)
Changed paths:
M
core-task-impl/src/main/java/org/cytoscape/task/internal/edit/ConnectSelectedNodesTask.java
Log Message:
-----------
Fix NPE
Commit: ca4cac908dabb5b390a7aeeec0423221ff943741
https://github.com/cytoscape/cytoscape-impl/commit/ca4cac908dabb5b390a7aeeec0423221ff943741
Author: Mike Kucera <[email protected]>
Date: 2022-12-01 (Thu, 01 Dec 2022)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/DVisualLexicon.java
Log Message:
-----------
"Always show graphic details" on by default.
Commit: ce5f8384e56e487b88100cec2af6090f86422a68
https://github.com/cytoscape/cytoscape-impl/commit/ce5f8384e56e487b88100cec2af6090f86422a68
Author: Mike Kucera <[email protected]>
Date: 2022-12-01 (Thu, 01 Dec 2022)
Changed paths:
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkViewContainer.java
Log Message:
-----------
Birds-eye-view panel off by default.
Commit: c5af78c24ec8780f05b99456ac8b1b401d45a306
https://github.com/cytoscape/cytoscape-impl/commit/c5af78c24ec8780f05b99456ac8b1b401d45a306
Author: Christian Lopes <[email protected]>
Date: 2022-12-05 (Mon, 05 Dec 2022)
Changed paths:
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
M app-impl/src/main/resources/fonts/app-manager.ttf
Log Message:
-----------
Trying another icon for the App Manager CytoPanel (instead of the "A" one) --
CYTOSCAPE-13005
Commit: c98bbd701d79d4f37f344e8b21f62555eb0e4ef1
https://github.com/cytoscape/cytoscape-impl/commit/c98bbd701d79d4f37f344e8b21f62555eb0e4ef1
Author: Scooter Morris <[email protected]>
Date: 2022-12-06 (Tue, 06 Dec 2022)
Changed paths:
M manual-layout-impl/pom.xml
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/common/AbstractManualLayoutAction.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/AbstractControlAction.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/HAlignCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/HAlignLeft.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/HAlignRight.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/VAlignBottom.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/VAlignCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/VAlignTop.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/HDistCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/HDistLeft.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/HDistRight.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/VDistBottom.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/VDistCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/VDistTop.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/HStackBottom.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/HStackCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/HStackTop.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/VStackCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/VStackLeft.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/VStackRight.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/view/AlignPanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/view/DistPanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/view/LayoutToolsPanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/view/StackPanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/rotate/RotatePanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/scale/ScalePanel.java
Log Message:
-----------
Add support for undo CYTOSCAPE-12958
Commit: 91bddc78b4fc95d5c658cd3b2a761bb7af1f1093
https://github.com/cytoscape/cytoscape-impl/commit/91bddc78b4fc95d5c658cd3b2a761bb7af1f1093
Author: Christian Lopes <[email protected]>
Date: 2022-12-07 (Wed, 07 Dec 2022)
Changed paths:
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
R app-impl/src/main/java/org/cytoscape/app/internal/util/IconUtil.java
R app-impl/src/main/resources/fonts/app-manager.ttf
M
core-task-impl/src/main/java/org/cytoscape/task/internal/utils/IconUtil.java
M swing-util-impl/src/main/resources/fonts/cytoscape-3.ttf
Log Message:
-----------
Adds the App Store icon to the reusable cytoscape-3.ttf file and deletes the
bundle's font file -- CYTOSCAPE-13005
Commit: bea6507ff0f037d1e926299c656c7b937ae5dcfb
https://github.com/cytoscape/cytoscape-impl/commit/bea6507ff0f037d1e926299c656c7b937ae5dcfb
Author: Christian Lopes <[email protected]>
Date: 2022-12-07 (Wed, 07 Dec 2022)
Changed paths:
M app-impl/src/main/java/org/cytoscape/app/internal/CyActivator.java
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M app-impl/src/main/java/org/cytoscape/app/internal/manager/AppManager.java
M
app-impl/src/main/java/org/cytoscape/app/internal/manager/LaunchManager.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
M app-impl/src/main/resources/AppManager/AppManager.html
A app-impl/src/main/resources/AppManager/img/adn-brands.png
A app-impl/src/main/resources/AppManager/img/adn-brands.svg
A app-impl/src/main/resources/AppManager/img/hamburger.ai
A app-impl/src/main/resources/AppManager/img/hamburger.png
A app-impl/src/main/resources/AppManager/img/logo.png
A app-impl/src/main/resources/AppManager/img/logo_mgr.ai
A app-impl/src/main/resources/AppManager/img/logo_mgr_large.png
A app-impl/src/main/resources/AppManager/img/search.png
A app-impl/src/main/resources/AppManager/img/tab.png
A app-impl/src/main/resources/AppManager/img/trash.png
A app-impl/src/main/resources/AppManager/img/trash2.png
A app-impl/src/main/resources/AppManager/img/update1.png
A app-impl/src/main/resources/AppManager/img/update2.png
A app-impl/src/main/resources/AppManager/img/update_og.png
R app-impl/src/main/resources/img/adn-brands.png
R app-impl/src/main/resources/img/adn-brands.svg
R app-impl/src/main/resources/img/hamburger.ai
R app-impl/src/main/resources/img/hamburger.png
R app-impl/src/main/resources/img/logo.png
R app-impl/src/main/resources/img/logo_mgr.ai
R app-impl/src/main/resources/img/logo_mgr_large.png
R app-impl/src/main/resources/img/search.png
R app-impl/src/main/resources/img/tab.png
R app-impl/src/main/resources/img/trash.png
R app-impl/src/main/resources/img/trash2.png
R app-impl/src/main/resources/img/update1.png
R app-impl/src/main/resources/img/update2.png
R app-impl/src/main/resources/img/update_og.png
M
core-task-impl/src/main/java/org/cytoscape/task/internal/edit/ConnectSelectedNodesTask.java
M
custom-graphics-internal/src/main/java/org/cytoscape/cg/internal/editor/CyCustomGraphicsValueEditor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/DVisualLexicon.java
M manual-layout-impl/pom.xml
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/common/AbstractManualLayoutAction.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/AbstractControlAction.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/HAlignCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/HAlignLeft.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/HAlignRight.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/VAlignBottom.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/VAlignCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/VAlignTop.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/HDistCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/HDistLeft.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/HDistRight.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/VDistBottom.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/VDistCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/VDistTop.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/HStackBottom.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/HStackCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/HStackTop.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/VStackCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/VStackLeft.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/VStackRight.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/view/AlignPanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/view/DistPanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/view/LayoutToolsPanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/view/StackPanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/rotate/RotatePanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/scale/ScalePanel.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/model/SelectionMode.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkViewContainer.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/CyActivator.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/reader/NetworkTableReader.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/ImportTableDataTask.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/LoadNetworkReaderTask.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/TableImportContext.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/AttributeEditorPanel.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/ImportTablePanel.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/PreviewTablePanel.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/util/TypeUtil.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/EditorManagerImpl.java
Log Message:
-----------
Merge branch 'develop' into feature/app-manager-icon
# Conflicts:
#
app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
Commit: 883b5b5f2f4e69fdd3887b374680cc3d0342a827
https://github.com/cytoscape/cytoscape-impl/commit/883b5b5f2f4e69fdd3887b374680cc3d0342a827
Author: Christian Lopes <[email protected]>
Date: 2022-12-07 (Wed, 07 Dec 2022)
Changed paths:
M app-impl/pom.xml
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/utils/IconUtil.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeDesktop.java
M swing-util-impl/src/main/resources/fonts/cytoscape-3.ttf
Log Message:
-----------
Merge pull request #47 from cytoscape/feature/app-manager-icon
Adds an icon to the App Manager CytoPanel (requires new changes propo…
Commit: 00945ab0b65fd7926816c4ac07f1cccf4969d88a
https://github.com/cytoscape/cytoscape-impl/commit/00945ab0b65fd7926816c4ac07f1cccf4969d88a
Author: Christian Lopes <[email protected]>
Date: 2022-12-07 (Wed, 07 Dec 2022)
Changed paths:
M
swing-application-impl/src/main/java/org/cytoscape/internal/model/SelectionMode.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/util/IconUtil.java
Log Message:
-----------
Fixes a typo in an icon's constant name.
Commit: ebd816883183df800aa8fe3007c26f3662fc20f0
https://github.com/cytoscape/cytoscape-impl/commit/ebd816883183df800aa8fe3007c26f3662fc20f0
Author: Yihang Xin <[email protected]>
Date: 2022-12-07 (Wed, 07 Dec 2022)
Changed paths:
M app-impl/src/main/java/org/cytoscape/app/internal/CyActivator.java
Log Message:
-----------
rename app manager to app store in menu
Commit: b88c2c0bf12b42cf4e320903e88573c1563949a3
https://github.com/cytoscape/cytoscape-impl/commit/b88c2c0bf12b42cf4e320903e88573c1563949a3
Author: Yihang Xin <[email protected]>
Date: 2022-12-07 (Wed, 07 Dec 2022)
Changed paths:
M app-impl/src/main/java/org/cytoscape/app/internal/CyActivator.java
Log Message:
-----------
add seperator for app store
Commit: 4766e0f0f57fcbae27c656fc299d9cc556fcb00f
https://github.com/cytoscape/cytoscape-impl/commit/4766e0f0f57fcbae27c656fc299d9cc556fcb00f
Author: Christian Lopes <[email protected]>
Date: 2022-12-08 (Thu, 08 Dec 2022)
Changed paths:
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeMenuBar.java
Log Message:
-----------
The menu bar now checks whether the parent of the removed menu is empty and
then asks the Menu Tracker to remove its associated MenuGravityTracker --
CYTOSCAPE-10195
Commit: 2ed4cae4a1637a75d5b964378c03477e7af86c75
https://github.com/cytoscape/cytoscape-impl/commit/2ed4cae4a1637a75d5b964378c03477e7af86c75
Author: Christian Lopes <[email protected]>
Date: 2022-12-08 (Thu, 08 Dec 2022)
Changed paths:
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeDesktop.java
Log Message:
-----------
No need to go through all the hassle of removing menus created from CyActions
when Cytoscape is being shut down -- CYTOSCAPE-10195
Commit: d6badee50134791494d3e7382cedc2d755258235
https://github.com/cytoscape/cytoscape-impl/commit/d6badee50134791494d3e7382cedc2d755258235
Author: Christian Lopes <[email protected]>
Date: 2022-12-08 (Thu, 08 Dec 2022)
Changed paths:
M app-impl/src/main/java/org/cytoscape/app/internal/CyActivator.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeMenus.java
Log Message:
-----------
Fixes the position of the "Apps.App Store" menu separator and makes it more
likely that "App Store is the first item when other apps register their menus".
Commit: 93d7569636096b7ad4eee5d3e62dbabd46f98a41
https://github.com/cytoscape/cytoscape-impl/commit/93d7569636096b7ad4eee5d3e62dbabd46f98a41
Author: Scooter Morris <[email protected]>
Date: 2022-12-08 (Thu, 08 Dec 2022)
Changed paths:
A app-impl/README.md
M app-impl/pom.xml
M app-impl/src/main/java/org/cytoscape/app/internal/CyActivator.java
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
M app-impl/src/main/java/org/cytoscape/app/internal/manager/AppManager.java
M
app-impl/src/main/java/org/cytoscape/app/internal/manager/LaunchManager.java
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
M
app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTaskFactory.java
A app-impl/src/main/resources/AppManager/AppManager.html
A app-impl/src/main/resources/AppManager/img/adn-brands.png
A app-impl/src/main/resources/AppManager/img/adn-brands.svg
A app-impl/src/main/resources/AppManager/img/hamburger.ai
A app-impl/src/main/resources/AppManager/img/hamburger.png
A app-impl/src/main/resources/AppManager/img/logo.png
A app-impl/src/main/resources/AppManager/img/logo_mgr.ai
A app-impl/src/main/resources/AppManager/img/logo_mgr_large.png
A app-impl/src/main/resources/AppManager/img/search.png
A app-impl/src/main/resources/AppManager/img/tab.png
A app-impl/src/main/resources/AppManager/img/trash.png
A app-impl/src/main/resources/AppManager/img/trash2.png
A app-impl/src/main/resources/AppManager/img/update1.png
A app-impl/src/main/resources/AppManager/img/update2.png
A app-impl/src/main/resources/AppManager/img/update_og.png
R app-impl/src/main/resources/appmanager.html
R app-impl/src/main/resources/appmanager.js
R app-impl/src/main/resources/img/adn-brands.png
R app-impl/src/main/resources/img/adn-brands.svg
R app-impl/src/main/resources/img/hamburger.ai
R app-impl/src/main/resources/img/hamburger.png
R app-impl/src/main/resources/img/logo.png
R app-impl/src/main/resources/img/logo_mgr.ai
R app-impl/src/main/resources/img/logo_mgr_large.png
R app-impl/src/main/resources/img/search.png
R app-impl/src/main/resources/img/tab.png
R app-impl/src/main/resources/img/trash.png
R app-impl/src/main/resources/img/trash2.png
R app-impl/src/main/resources/img/update1.png
R app-impl/src/main/resources/img/update2.png
R app-impl/src/main/resources/img/update_og.png
R app-impl/src/main/resources/test.html
M
core-task-impl/src/main/java/org/cytoscape/task/internal/edit/ConnectSelectedNodesTask.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/export/network/GenerateNetworkViewsTask.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/hide/AbstractUnHideTaskFactory.java
M
core-task-impl/src/main/java/org/cytoscape/task/internal/utils/IconUtil.java
M
custom-graphics-internal/src/main/java/org/cytoscape/cg/internal/editor/CyCustomGraphicsValueEditor.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/DVisualLexicon.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/DRenderingEngine.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/InputHandlerGlassPane.java
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/ding/impl/canvas/NetworkImageFactoryImpl.java
M filter2-impl/src/main/java/org/cytoscape/filter/internal/ModelMonitor.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/filters/degree/DegreeFilterViewFactory.java
M
filter2-impl/src/main/java/org/cytoscape/filter/internal/filters/degree/DegreeRange.java
M manual-layout-impl/pom.xml
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/common/AbstractManualLayoutAction.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/AbstractControlAction.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/HAlignCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/HAlignLeft.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/HAlignRight.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/VAlignBottom.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/VAlignCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/align/VAlignTop.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/HDistCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/HDistLeft.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/HDistRight.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/VDistBottom.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/VDistCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/dist/VDistTop.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/HStackBottom.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/HStackCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/HStackTop.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/VStackCenter.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/VStackLeft.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/actions/stack/VStackRight.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/view/AlignPanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/view/DistPanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/view/LayoutToolsPanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/control/view/StackPanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/rotate/RotatePanel.java
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/scale/ScalePanel.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/model/SelectionMode.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/util/IconUtil.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeDesktop.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeMenuBar.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/CytoscapeMenus.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/NetworkViewContainer.java
M
swing-application-impl/src/main/java/org/cytoscape/internal/view/util/ViewUtil.java
M swing-util-impl/src/main/resources/fonts/cytoscape-3.ttf
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/CyActivator.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/reader/NetworkTableReader.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/ImportTableDataTask.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/LoadNetworkReaderTask.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/task/TableImportContext.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/AttributeEditorPanel.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/ImportTablePanel.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/ui/PreviewTablePanel.java
M
table-import-impl/src/main/java/org/cytoscape/tableimport/internal/util/TypeUtil.java
M
viewmodel-impl/impl/src/main/java/org/cytoscape/view/model/internal/base/CyViewBase.java
M
viewmodel-impl/impl/src/main/java/org/cytoscape/view/model/internal/base/ViewLock.java
M
viewmodel-impl/impl/src/main/java/org/cytoscape/view/model/internal/network/CyNetworkViewImpl.java
M
viewmodel-impl/impl/src/main/java/org/cytoscape/view/model/internal/table/CyTableViewImpl.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/VizMapperMediator.java
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/editor/EditorManagerImpl.java
Log Message:
-----------
Merge branch 'develop' into feature/opencl
Compare:
https://github.com/cytoscape/cytoscape-impl/compare/afb608a6e418...93d756963609
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