Branch: refs/heads/unstable
Home: https://github.com/PathwayCommons/factoid
Commit: bd085411f956768ffeae67a884fa926072946190
https://github.com/PathwayCommons/factoid/commit/bd085411f956768ffeae67a884fa926072946190
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-17 (Fri, 17 Mar 2023)
Changed paths:
M neo4j-test/add-nodes-edges.js
M src/neo4j/neo4j-document.js
M src/neo4j/neo4j-functions.js
M src/neo4j/query-strings.js
Log Message:
-----------
add participantTypes field to edges, make 'ToDo's
Commit: 778ed801ef820b4da1854bd477be0b522e2760e1
https://github.com/PathwayCommons/factoid/commit/778ed801ef820b4da1854bd477be0b522e2760e1
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-17 (Fri, 17 Mar 2023)
Changed paths:
M src/neo4j/neo4j-document.js
M src/neo4j/neo4j-functions.js
Log Message:
-----------
addComplexEdge (untested)
Commit: 6526d7042d0280877d979d5222d04771e6b930c4
https://github.com/PathwayCommons/factoid/commit/6526d7042d0280877d979d5222d04771e6b930c4
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-20 (Mon, 20 Mar 2023)
Changed paths:
M src/neo4j/neo4j-functions.js
Log Message:
-----------
add function to make Complex edge id
Commit: 3ed6db485e4dec22bd0af7b27b78006deb8a06b1
https://github.com/PathwayCommons/factoid/commit/3ed6db485e4dec22bd0af7b27b78006deb8a06b1
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-21 (Tue, 21 Mar 2023)
Changed paths:
M neo4j-test/add-nodes-edges.js
M src/neo4j/neo4j-document.js
M src/neo4j/neo4j-functions.js
M src/neo4j/query-strings.js
Log Message:
-----------
get rid of participantTypes, add new fields to addEdge
Commit: 0619f8ee2d0f5df01fc4e2a38ab7c4bf54451951
https://github.com/PathwayCommons/factoid/commit/0619f8ee2d0f5df01fc4e2a38ab7c4bf54451951
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-21 (Tue, 21 Mar 2023)
Changed paths:
M neo4j-test/doc-tests.js
Log Message:
-----------
update doc-tests.js with new fields
Commit: 53eb150a693b097e76232e7bc09dbc3635832bb3
https://github.com/PathwayCommons/factoid/commit/53eb150a693b097e76232e7bc09dbc3635832bb3
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-21 (Tue, 21 Mar 2023)
Changed paths:
M src/neo4j/neo4j-document.js
Log Message:
-----------
add capability to "make" complexes. Untested
Commit: 34ec845721434d90fa1e027089e558f7121b6af6
https://github.com/PathwayCommons/factoid/commit/34ec845721434d90fa1e027089e558f7121b6af6
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-21 (Tue, 21 Mar 2023)
Changed paths:
M src/neo4j/neo4j-document.js
Log Message:
-----------
Handle interactions between complex and non-complex (untested)
Commit: 326fd47434aa9306cd9eab88286e736f16d9c04f
https://github.com/PathwayCommons/factoid/commit/326fd47434aa9306cd9eab88286e736f16d9c04f
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-21 (Tue, 21 Mar 2023)
Changed paths:
M src/neo4j/neo4j-document.js
Log Message:
-----------
fix minor errors with interaction handling
Commit: cddda96316a89f801967ca653152088f66d0c878
https://github.com/PathwayCommons/factoid/commit/cddda96316a89f801967ca653152088f66d0c878
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-22 (Wed, 22 Mar 2023)
Changed paths:
M src/neo4j/neo4j-document.js
Log Message:
-----------
Handle interactions between 2 complexes (untested)
Commit: 8af40ffbf23b4ef31b339f6be3d1a26ebf3caa47
https://github.com/PathwayCommons/factoid/commit/8af40ffbf23b4ef31b339f6be3d1a26ebf3caa47
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-22 (Wed, 22 Mar 2023)
Changed paths:
M src/neo4j/neo4j-document.js
Log Message:
-----------
fix bug in complexEdgesMaker
Commit: b52e3c4471df3a12e3931e85e3b0cb388cd6705a
https://github.com/PathwayCommons/factoid/commit/b52e3c4471df3a12e3931e85e3b0cb388cd6705a
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-22 (Wed, 22 Mar 2023)
Changed paths:
M src/neo4j/neo4j-document.js
Log Message:
-----------
typo
Commit: 2e6e13fc20399e8511e7b27eeb7727443bf5398a
https://github.com/PathwayCommons/factoid/commit/2e6e13fc20399e8511e7b27eeb7727443bf5398a
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-22 (Wed, 22 Mar 2023)
Changed paths:
M src/neo4j/neo4j-document.js
Log Message:
-----------
fix bug with complexEdgesMaker
Commit: 95e2422f0ccd47d91db498c7f93702a829ae35de
https://github.com/PathwayCommons/factoid/commit/95e2422f0ccd47d91db498c7f93702a829ae35de
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-22 (Wed, 22 Mar 2023)
Changed paths:
M src/neo4j/neo4j-document.js
Log Message:
-----------
delete complexEdgesMaker, integrate into addDocumentsToNeo4j
Commit: 5511c839a1bac344f0c0d8636f14533d2563ba7d
https://github.com/PathwayCommons/factoid/commit/5511c839a1bac344f0c0d8636f14533d2563ba7d
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-22 (Wed, 22 Mar 2023)
Changed paths:
M src/neo4j/neo4j-document.js
Log Message:
-----------
change type:'complex' to type:'binding'
Commit: daa4894457e30621f8cbd3e88749565a42cdc092
https://github.com/PathwayCommons/factoid/commit/daa4894457e30621f8cbd3e88749565a42cdc092
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-22 (Wed, 22 Mar 2023)
Changed paths:
M neo4j-test/add-nodes-edges.js
M neo4j-test/search-tests.js
M src/neo4j/index.js
M src/neo4j/neo4j-functions.js
Log Message:
-----------
rename searchByMoleculeId to neighbourhood
Commit: 229eee64d954558883feb653d339b1927217ec6a
https://github.com/PathwayCommons/factoid/commit/229eee64d954558883feb653d339b1927217ec6a
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-22 (Wed, 22 Mar 2023)
Changed paths:
M src/neo4j/neo4j-document.js
Log Message:
-----------
.element() typo
Commit: a9eb2989290f31b0479d12b0d962692d13a9eec2
https://github.com/PathwayCommons/factoid/commit/a9eb2989290f31b0479d12b0d962692d13a9eec2
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-22 (Wed, 22 Mar 2023)
Changed paths:
M neo4j-test/add-nodes-edges.js
M neo4j-test/doc-tests.js
M src/neo4j/neo4j-document.js
Log Message:
-----------
replace 'N/A' with ''
Commit: a9c80528d3f67088f44dc591ed43ea307e1adb97
https://github.com/PathwayCommons/factoid/commit/a9c80528d3f67088f44dc591ed43ea307e1adb97
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-22 (Wed, 22 Mar 2023)
Changed paths:
M src/neo4j/neo4j-document.js
Log Message:
-----------
change complex nested loop indexing (more readable)
Commit: 618c1f8391f093071f381cfecdb778aee595ba70
https://github.com/PathwayCommons/factoid/commit/618c1f8391f093071f381cfecdb778aee595ba70
Author: Linda (Jia Wen) Li <[email protected]>
Date: 2023-03-22 (Wed, 22 Mar 2023)
Changed paths:
M neo4j-test/add-nodes-edges.js
M neo4j-test/doc-tests.js
M neo4j-test/search-tests.js
M src/neo4j/index.js
M src/neo4j/neo4j-document.js
M src/neo4j/neo4j-functions.js
M src/neo4j/query-strings.js
Log Message:
-----------
Merge pull request #1147 from PathwayCommons/iss1146-neo4j-complexes
Iss1146: Neo4j Handling Complexes
Compare:
https://github.com/PathwayCommons/factoid/compare/eca68a131632...618c1f8391f0
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