Branch: refs/heads/release/3.10.2
Home: https://github.com/cytoscape/cytoscape-impl
Commit: 46554154f44988de296b164da52b70bd9d52d900
https://github.com/cytoscape/cytoscape-impl/commit/46554154f44988de296b164da52b70bd9d52d900
Author: Scooter Morris <[email protected]>
Date: 2023-12-11 (Mon, 11 Dec 2023)
Changed paths:
M
layout-cytoscape-impl/src/main/java/csapps/layout/algorithms/bioLayout/BioLayoutFRAlgorithmTask.java
Log Message:
-----------
Merge pull request #49 from mesvam/patch-1
Fix wrong attractive force in Edge-weighted Force directed layout
Commit: 247c5893e28b82881ecce146fe2d72880f13d45e
https://github.com/cytoscape/cytoscape-impl/commit/247c5893e28b82881ecce146fe2d72880f13d45e
Author: yihangx <[email protected]>
Date: 2023-12-11 (Mon, 11 Dec 2023)
Changed paths:
M app-impl/src/main/java/org/cytoscape/app/internal/task/AppManagerTask.java
Log Message:
-----------
Fixed CYTOSCAPE-13103
Commit: 1eafa1379cc6f7ed304732fed04cfd45f826ed42
https://github.com/cytoscape/cytoscape-impl/commit/1eafa1379cc6f7ed304732fed04cfd45f826ed42
Author: yihangx <[email protected]>
Date: 2023-12-11 (Mon, 11 Dec 2023)
Changed paths:
M app-impl/src/main/resources/AppManager/AppManager.html
Log Message:
-----------
Merge branch 'develop' of github.com:cytoscape/cytoscape-impl into develop
Commit: 7f4a26a1fb1711963474ff763ccdb110999014ac
https://github.com/cytoscape/cytoscape-impl/commit/7f4a26a1fb1711963474ff763ccdb110999014ac
Author: yihangx <[email protected]>
Date: 2023-12-11 (Mon, 11 Dec 2023)
Changed paths:
M
app-impl/src/main/java/org/cytoscape/app/internal/action/UpdateNotificationAction.java
Log Message:
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Fixed CYTOSCAPE-13103
Commit: fdfd2933e7bba79111e6d34cc3cdab7faee3e0ed
https://github.com/cytoscape/cytoscape-impl/commit/fdfd2933e7bba79111e6d34cc3cdab7faee3e0ed
Author: Scooter Morris <[email protected]>
Date: 2023-12-11 (Mon, 11 Dec 2023)
Changed paths:
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/CyActivator.java
A
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/tasks/RotateTask.java
A
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/tasks/RotateTaskFactory.java
A
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/tasks/ScaleTask.java
A
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/tasks/ScaleTaskFactory.java
Log Message:
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Implementation of commands for rotate and scale. CYTOSCAPE-13105
Commit: 5584232a097472cf3f3d629140accff222c55bb4
https://github.com/cytoscape/cytoscape-impl/commit/5584232a097472cf3f3d629140accff222c55bb4
Author: Scooter Morris <[email protected]>
Date: 2023-12-11 (Mon, 11 Dec 2023)
Changed paths:
M
manual-layout-impl/src/main/java/org/cytoscape/view/manual/internal/tasks/ScaleTask.java
Log Message:
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Don't use pow to adjust the scale -- just pass the value along directly.
CYTOSCAPE-13105
Commit: 4dcbedb171b4142e5e253deeb3a4e57dc315f17b
https://github.com/cytoscape/cytoscape-impl/commit/4dcbedb171b4142e5e253deeb3a4e57dc315f17b
Author: Mike Kucera <[email protected]>
Date: 2023-12-11 (Mon, 11 Dec 2023)
Changed paths:
M
custom-graphics-internal/src/main/java/org/cytoscape/cg/internal/charts/AbstractChart.java
Log Message:
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CYTOSCAPE-13111 Avoid NPE from chart when column contains error equation
Commit: 2a91f480e157e530f938f389382e7cc5ffa93173
https://github.com/cytoscape/cytoscape-impl/commit/2a91f480e157e530f938f389382e7cc5ffa93173
Author: Christian Lopes <[email protected]>
Date: 2023-12-11 (Mon, 11 Dec 2023)
Changed paths:
M
model-impl/impl/src/main/java/org/cytoscape/model/internal/CyNetworkTableManagerImpl.java
M
session-impl/src/main/java/org/cytoscape/session/internal/CySessionManagerImpl.java
Log Message:
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Disposes unregistered networks (that have the SESSION_FILE SavePolicy) when
closing a session -- CYTOSCAPE-13112
Commit: 6482b4677d5f6fd3cf38699bfa74d0f4933fa205
https://github.com/cytoscape/cytoscape-impl/commit/6482b4677d5f6fd3cf38699bfa74d0f4933fa205
Author: Scooter Morris <[email protected]>
Date: 2023-12-11 (Mon, 11 Dec 2023)
Changed paths:
M
vizmap-gui-impl/src/main/java/org/cytoscape/view/vizmap/gui/internal/view/VizMapperMediator.java
Log Message:
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Attempted fix for CSD-1012 -- make sure to select the proper property
sheet before we createa ll of the visual property shett items
Commit: 00281bd6cfa42c32551aecbb8cdaa7be8659f195
https://github.com/cytoscape/cytoscape-impl/commit/00281bd6cfa42c32551aecbb8cdaa7be8659f195
Author: Scooter Morris <[email protected]>
Date: 2023-12-11 (Mon, 11 Dec 2023)
Changed paths:
M
io-impl/impl/src/main/java/org/cytoscape/io/internal/write/graphics/SVGWriter.java
Log Message:
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Partial fix for CSD-999. The SVG problem was caused by writing the date
in the <desc> line in 16-bit Unicode. To avoid that, we simply set
DeviceIndependent and the date is no longer written at all.
Commit: e933c93239f77cd87c28d3e4bb43a684f65c9930
https://github.com/cytoscape/cytoscape-impl/commit/e933c93239f77cd87c28d3e4bb43a684f65c9930
Author: Mike Kucera <[email protected]>
Date: 2023-12-11 (Mon, 11 Dec 2023)
Changed paths:
M
ding-impl/ding-presentation-impl/src/main/java/org/cytoscape/graph/render/immed/GraphGraphics.java
Log Message:
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CYTOSCAPE-13116 Increase max edge anchors from 64 to 256.
Compare:
https://github.com/cytoscape/cytoscape-impl/compare/f489b30127c9...e933c93239f7
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