Dear all,
I am a brand new user of Deal II and after a lots of issues with compiler
flags, I have been able to compile the latest SVN version of Deal II with:
./configure --with-lapack --with-blas
--with-doxygen=/Applications/Doxygen.app/Contents/Resources/doxygen
-with-trilinos=/Users/biswasengupta/Desktop/tril CC=mpicc CXX=mpic++
F77=mpif77 --disable-shared --with-umfpack --with-netcdf=/usr/local/netcdf
--with-metis=/Users/biswasengupta/Desktop/software_required/SuiteSparse/metis-4.0.3
--enable-threads
I have tried the compilation with and without PETSC, the error I describe holds
for both:
4565:step-5 biswasengupta$ make
Makefile:141: Makefile.dep: No such file or directory
============================ Remaking Makefile.dep
==============debug========= step-5.cc -> step-5.g.o
============================ Linking step-5
Undefined symbols:
"_Zoltan_Create", referenced from:
_ML_DecomposeGraph_with_Zoltan in libml.a(ml_agg_Zoltan.c.o)
"_Zoltan_Destroy", referenced from:
_ML_DecomposeGraph_with_Zoltan in libml.a(ml_agg_Zoltan.c.o)
"_Zoltan_Set_Param", referenced from:
_setup_zoltan in libml.a(ml_agg_Zoltan.c.o)
_setup_zoltan in libml.a(ml_agg_Zoltan.c.o)
_setup_zoltan in libml.a(ml_agg_Zoltan.c.o)
_setup_zoltan in libml.a(ml_agg_Zoltan.c.o)
_run_zoltan in libml.a(ml_agg_Zoltan.c.o)
_ML_DecomposeGraph_with_Zoltan in libml.a(ml_agg_Zoltan.c.o)
_ML_DecomposeGraph_with_Zoltan in libml.a(ml_agg_Zoltan.c.o)
_ML_DecomposeGraph_with_Zoltan in libml.a(ml_agg_Zoltan.c.o)
"_Zoltan_Set_Fn", referenced from:
_setup_zoltan in libml.a(ml_agg_Zoltan.c.o)
_setup_zoltan in libml.a(ml_agg_Zoltan.c.o)
_setup_zoltan in libml.a(ml_agg_Zoltan.c.o)
_setup_zoltan in libml.a(ml_agg_Zoltan.c.o)
"_Zoltan_Initialize", referenced from:
_ML_Operator_BlockPartition in libml.a(ml_op_utils.c.o)
_ML_DecomposeGraph_with_Zoltan in libml.a(ml_agg_Zoltan.c.o)
"_Zoltan_LB_Free_Part", referenced from:
_run_zoltan in libml.a(ml_agg_Zoltan.c.o)
_run_zoltan in libml.a(ml_agg_Zoltan.c.o)
"_Zoltan_LB_Partition", referenced from:
_run_zoltan in libml.a(ml_agg_Zoltan.c.o)
ld: symbol(s) not found
collect2: ld returned 1 exit status
make: *** [step-5] Error 1
Now, if PETSC is enabled and I try to compile any of the examples, the linker
throws an error on the related petsc library as well. So, I guess something
fundamental is wrong. Is there any flag or log file where one can check whether
the compilation has truly been fault-less? Any suggestions are welcome. BTW I
am on a Mac with Snow Leopard (Dual Core).
Best,
Biswa
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