I tried running make using cygwin in the examples/step-1 directory and that did compile a .exe file. I forgot to mention that I also used the libstdc++.a with the linker in codeblocks. I'm n How would I debug a program with make. Are there flags I should use for gdb?
deal.II provides Makefiles for precisely this reason: so that all the flags are set correctly. We have spent many hours getting this right. Use them. (In your particular case, I believe that you forgot that there are other C++ libraries that you also have to link with, besides libstdc++.a.)
If you really want to use codeblocks, and if codeblocks really doesn't support the use of custom makefiles, you can always use codeblocks for writing code and simply compile everything on the command line.
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