*I first build deal II without candi, and realize lots of dependency
packages are lacking. Then I switched to candi and modified candi.cfg file
accordingly.*
DEAL_CONFOPTS="\
-D DEAL_II_WITH_MPI:BOOL=ON \
-D DEAL_II_WITH_THREADS:BOOL=ON \
-D DEAL_II_FORCE_BUNDLED_THREADS:BOOL=OFF \
-D DEAL_II_COMPONENT_DOCUMENTATION:BOOL=OFF \
-D DEAL_II_WITH_SLEPC:BOOL=ON \
-D DEAL_II_WITH_PETSC:BOOL=ON \
-D DEAL_II_WITH_LAPACK:BOOL=ON \
-D DEAL_II_WITH_UMFPACK:BOOL=ON \
-D DEAL_II_FORCE_BUNDLED_UMFPACK:BOOL=ON \
-D DEAL_II_WITH_BOOST:BOOL=ON \
-D DEAL_II_FORCE_BUNDLED_BOOST:BOOL=OFF \
-D DEAL_II_WITH_ZLIB:BOOL=ON \
-D DEAL_II_WITH_FUNCTIONPARSER:BOOL=ON \
-D DEAL_II_COMPONENT_MESH_CONVERTER:BOOL=ON"
PACKAGES="load:dealii-prepare"
# These are system dependencies that are often pre-installed
#PACKAGES="${PACKAGES} once:zlib"
#PACKAGES="${PACKAGES} once:bzip2"
#PACKAGES="${PACKAGES} once:git"
#PACKAGES="${PACKAGES} once:cmake"
#PACKAGES="${PACKAGES} once:boost"
#PACKAGES="${PACKAGES} once:numdiff"
# These packages determine the active components of deal.II
#PACKAGES="${PACKAGES} once:arpack-ng"
PACKAGES="${PACKAGES} once:opencascade"
PACKAGES="${PACKAGES} once:parmetis"
#PACKAGES="${PACKAGES} once:superlu_dist"
PACKAGES="${PACKAGES} once:hdf5"
PACKAGES="${PACKAGES} once:p4est"
PACKAGES="${PACKAGES} once:trilinos"
PACKAGES="${PACKAGES} once:petsc"
PACKAGES="${PACKAGES} once:slepc"
PACKAGES="${PACKAGES} dealii"
*Compiling my project went smoothly. However, running the executable gives
me the following error.*An error occurred in line <386> of file
</home/xxxxxxxxx/Downloads/dealii-8.5.0/source/lac/sparse_direct.cc> in
function
void dealii::SparseDirectUMFPACK::factorize(const Matrix&) [with Matrix
= dealii::SparseMatrix<double>]
The violated condition was:
false
Additional information:
To call this function you need UMFPACK, but you configured deal.II
without passing the necessary switch to 'cmake'. Please consult the
installation instructions in doc/readme.html.
*The file
</home/xxxxxxxxx/Downloads/dealii-8.5.0/source/lac/sparse_direct.cc> has
been deleted because it was the remnant of original build without candi. I
think the error has something to do with a cmake file not overridden by
candi, but i can't figure out where that cmake file is.Any suggestion to
debugging would be appreciated!*
--
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