Dear all, I am trying to install deal.ii on a cluster. in my University, that I can run bigger jobs with parallel computations.
I am installing library locally in my home directory. Before configuring deal.ii, I have installed petsc, p4est-2.0 and netcdf-cxx-4.2. Other necessary libraries were already installed and I only had to load the modules. I have managed to successfully configure deal.ii with the following command: *cmake ../dealii -DCMAKE_INSTALL_PREFIX=/home/a/aa682/dealii_install -DDEAL_II_WITH_MPI=ON -DCMAKE_C_COMPILER=/cm/shared/apps/intel/impi/2017.1.132/intel64/bin/mpicc -DCMAKE_CXX_COMPILER=/cm/shared/apps/intel/impi/2017.1.132/intel64/bin/mpicxx -DCMAKE_Fortran_COMPILER=/cm/shared/apps/intel/impi/2017.1.132/intel64/bin/mpif90 -DDEAL_II_WITH_NETCDF=ON -DNETCDF_LIBRARIES=/cm/shared/apps/netcdf/intel-mpi/4.4.1/lib/libnetcdf.so -DDEAL_II_WITH_P4EST=ON -DP4EST_DIR=/home/a/aa682/Libraries/p4est-2.0/ -DDEAL_II_WITH_HDF5=ON -DHDF5_LIBRARIES=/cm/shared/apps/hdf5/intel-mpi/1.8.17/lib/libhdf5.so -DHDF5_WITH_MPI=ON -DDEAL_II_WITH_PETSC=ON -DPETSC_DIR=/home/a/aa682/Libraries/petsc -DPETSC_ARCH=arch-linux2-c-debug -DDEAL_II_WITH_SLEPC=OFF -DCMAKE_CXX_FLAGS=" -I/home/a/aa682/Libraries/netcdf-cxx-4.2/cxx"* But then when typing make all, I am always getting the following error message *[ 57%] Linking CXX shared library ../lib/libdeal_II.socollect2: error: ld terminated with signal 7 [Bus error], core dumpedmake[2]: *** [lib/libdeal_II.so.9.0.0-pre] Error 1make[2]: *** Deleting file `lib/libdeal_II.so.9.0.0-pre'make[1]: *** [source/CMakeFiles/deal_II.dir/all] Error 2make: *** [all] Error 2* Did anybody else have a similar error? I would very much appreciate any help. Thank you very much in advance, Anna -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. To unsubscribe from this group and stop receiving emails from it, send an email to dealii+unsubscr...@googlegroups.com. For more options, visit https://groups.google.com/d/optout.
