Hi Timo Thanks for your help! I disabled DEAL_II_WITH_THREADS and now it runs fine! Just out of curiosity, what do I lose with it disabled? What additional library do I need to build if I want to have it? (Internet is banned on the cluster I use, everything has to be built from source.)
Best Jie On Tue, Apr 24, 2018 at 12:01 PM Timo Heister <[email protected]> wrote: > can you post your detailed.log? > > If a tutorial like step-1 crashes, please > 1. check the dynamic libraries by doing "ldd step-1" and post the > output. Maybe you have conflicting libraries you are linking. > 2. run under gdb: "gdb step-1" then "run" then "backtrace" to see > where you crash. > > > On Mon, Apr 23, 2018 at 8:49 PM, Jie Cheng <[email protected]> wrote: > > Hi Wolfgang > > > > Sorry for not updating this issue for so long. I've been developing on my > > local machine until recently I started to test my code on cluster again. > > This issue has not been resolved, linking to SolutionTransfer will fail > if I > > build static library (solution_transfer is compiled). But now I tried to > > build shared libraries instead. I did a minimum build of dealii (using > all > > of the default building options), configuration, compiling and linking > went > > smoothly without any error. But I could not run any tutorial, all of them > > gave me segmentation fault immediately (no useful info, only segment > fault). > > I was not even able to run a "hello world" problem if I link it with > dealii. > > Building in debug mode did not help. I completely have no clue how this > > could happen. Can you please point me a direction to understand the > problem? > > > > The source code I used is up-to-date (SHA: 3d0c7ab699dace76); > > System is Scientific Linux 6.9 (Carbon) > > gcc version is 7.3.0 > > > > I've attached my CMakeCache and summary.log. > > > > Thank you! > > Jie > > > > > > -- > > The deal.II project is located at > https://urldefense.proofpoint.com/v2/url?u=http-3A__www.dealii.org_&d=DwIBaQ&c=Ngd-ta5yRYsqeUsEDgxhcqsYYY1Xs5ogLxWPA_2Wlc4&r=4k7iKXbjGC8LfYxVJJXiaYVu6FRWmEjX38S7JmlS9Vw&m=TjzN-LMQUtQJoM1bxgcw94aP7tCtQ2r10bl2qQSpDPw&s=POnss3ormS1XXiqg54YqF_mukzlGpflHaAItgpvWE3Y&e= > > For mailing list/forum options, see > > > https://urldefense.proofpoint.com/v2/url?u=https-3A__groups.google.com_d_forum_dealii-3Fhl-3Den&d=DwIBaQ&c=Ngd-ta5yRYsqeUsEDgxhcqsYYY1Xs5ogLxWPA_2Wlc4&r=4k7iKXbjGC8LfYxVJJXiaYVu6FRWmEjX38S7JmlS9Vw&m=TjzN-LMQUtQJoM1bxgcw94aP7tCtQ2r10bl2qQSpDPw&s=GYouR_JzJGhPjFcghkqeOFIAY5ZDJ9D4zi4F_JqIRlo&e= > > --- > > You received this message because you are subscribed to the Google Groups > > "deal.II User Group" group. > > To unsubscribe from this group and stop receiving emails from it, send an > > email to [email protected]. > > For more options, visit > https://urldefense.proofpoint.com/v2/url?u=https-3A__groups.google.com_d_optout&d=DwIBaQ&c=Ngd-ta5yRYsqeUsEDgxhcqsYYY1Xs5ogLxWPA_2Wlc4&r=4k7iKXbjGC8LfYxVJJXiaYVu6FRWmEjX38S7JmlS9Vw&m=TjzN-LMQUtQJoM1bxgcw94aP7tCtQ2r10bl2qQSpDPw&s=rxGsQICkV6INJ7F-q3Zq9rk0AX9DimjYhTfWbSoLGIg&e= > . > > > > -- > Timo Heister > http://www.math.clemson.edu/~heister/ > > -- > The deal.II project is located at http://www.dealii.org/ > For mailing list/forum options, see > https://groups.google.com/d/forum/dealii?hl=en > --- > You received this message because you are subscribed to a topic in the > Google Groups "deal.II User Group" group. > To unsubscribe from this topic, visit > https://groups.google.com/d/topic/dealii/Ea-kSSnwLYg/unsubscribe. > To unsubscribe from this group and all its topics, send an email to > [email protected]. > For more options, visit https://groups.google.com/d/optout. > -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. For more options, visit https://groups.google.com/d/optout.
