J-P and Praveen, Thanks for your help. Spack installation for deal.ii worked out well. Petsc 3.10 or later is required, I used 3.10.
Alberto Alberto Salvadori Associate Professor DIMI, University of Brescia, Italy > On 22 Oct 2018, at 09:28, Jean-Paul Pelteret <jppelte...@gmail.com> wrote: > >> Shall I edit “.spack/linux/packages.yaml” file ? > > Yes, since you’re already using this file to constrain other packages I would > suggest adding > > petsc: > version: [3.9.4] > suite-sparse: > version: [5.1.0] > > to that list. You should check to see if the version of PETSc can be safely > incremented upwards - I’ve taken a conservative guess as to which version is > safe to use. > >> On 22 Oct 2018, at 08:57, Alberto Salvadori <alberto.salvad...@unibs.it> >> wrote: >> >> Thank you J-P. >> Can you please remind me how to do what you suggest? Shall I edit >> “.spack/linux/packages.yaml” file ? >> >> >> Alberto Salvadori >> Dipartimento di Ingegneria Civile, Architettura, Territorio, Ambiente e di >> Matematica (DICATAM) >> Universita` di Brescia, via Branze 43, 25123 Brescia >> Italy >> tel 030 3711239 >> fax 030 3711312 >> >> e-mail: >> alberto.salvad...@unibs.it >> web-pages: >> http://m4lab.unibs.it/faculty.html >> http://dicata.ing.unibs.it/salvadori >> >> >>> On Mon, Oct 22, 2018 at 8:43 AM Jean-Paul Pelteret <jppelte...@gmail.com> >>> wrote: >>> Hi Alberto, >>> >>> As best I recall, their is a problem with a hidden clash in the >>> dependencies between the latest PETSc and Trilinos versions. (I thought >>> that there was an issue/PR on github/spack, but I couldn’t find it right >>> now.) The former wants a new version of SuiteSparse while the latter does >>> not yet support it. I think that the solution is to specify an older >>> version of PETSc when building with both PETSc and Trilinos. >>> >>> Best, >>> J-P >>> >>>> On 22 Oct 2018, at 08:19, Alberto Salvadori <alberto.salvad...@unibs.it> >>>> wrote: >>>> >>>> Thank you, Praveen. >>>> >>>> While installing deal.ii all detailed instructions on the spack wiki page >>>> have been followed. I cloned spack from git (I thus assume it is the >>>> latest version) and made no modifications (yet :-) ) to the >>>> “.spack/linux/packages.yaml” file. By the way, I did install deal.ii on >>>> opensuse a couple of weeks ago without this issue. >>>> >>>> Shall I attach my “.spack/linux/packages.yaml” here? >>>> >>>> Alberto >>>> >>>> Alberto Salvadori >>>> Dipartimento di Ingegneria Civile, Architettura, Territorio, Ambiente e >>>> di Matematica (DICATAM) >>>> Universita` di Brescia, via Branze 43, 25123 Brescia >>>> Italy >>>> tel 030 3711239 >>>> fax 030 3711312 >>>> >>>> e-mail: >>>> alberto.salvad...@unibs.it >>>> web-pages: >>>> http://m4lab.unibs.it/faculty.html >>>> http://dicata.ing.unibs.it/salvadori >>>> >>>> >>>>> On Mon, Oct 22, 2018 at 8:08 AM Praveen C <cprav...@gmail.com> wrote: >>>>> When I check spec on my opensuse machine, dealii@9.0.1 wants to use >>>>> suite-sparse@5.3.0 >>>>> >>>>> Have you perhaps already set some versions in your >>>>> “.spack/linux/packages.yaml” file ? >>>>> >>>>> What does your file look like ? >>>>> >>>>> Also, you may want to update your spack to see it that fixes it. >>>>> >>>>> Thanks >>>>> praveen >>>>> >>>>>> On 22-Oct-2018, at 11:20 AM, Alberto Salvadori >>>>>> <alberto.salvad...@unibs.it> wrote: >>>>>> >>>>>> Dear community >>>>>> >>>>>> I am installing deal.ii (latest release) on a CentOS7 equipped machine. >>>>>> After typing >>>>>> >>>>>> spack install --test=root dealii >>>>>> >>>>>> I see this error: >>>>>> >>>>>> ==> Error: An unsatisfiable version constraint has been detected for >>>>>> spec: >>>>>> >>>>>> suite-sparse@5.3.0%gcc@4.8.5~cuda~openmp+pic~tbb >>>>>> arch=linux-centos7-x86_64 >>>>>> >>>>>> >>>>>> while trying to concretize the partial spec: >>>>>> >>>>>> dealii@9.0.1%gcc@4.8.5+adol-c+arpack+assimp build_type=DebugRelease >>>>>> ~cuda cuda_arch= >>>>>> ~doc+gmsh+gsl+hdf5~int64+metis+mpi+nanoflann+netcdf+oce~optflags+p4est+petsc~python+scalapack+slepc+sundials+trilinos >>>>>> arch=linux-centos7-x86_64 >>>>>> ^adol-c@2.6.4: >>>>>> ^arpack-ng+mpi >>>>>> ^mpi >>>>>> ^openblas@0.3.3%gcc@4.8.5 cpu_target= ~ilp64+pic+shared >>>>>> threads=none ~virtual_machine arch=linux-centos7-x86_64 >>>>>> ^assimp >>>>>> >>>>>> ^boost@1.59.0:1.63,1.65.1,1.67.0:+iostreams+serialization+system+thread >>>>>> ^bzip2 >>>>>> ^diffutils >>>>>> ^zlib@1.2.11%gcc@4.8.5+optimize+pic+shared >>>>>> arch=linux-centos7-x86_64 >>>>>> ^cmake@3.12.2%gcc@4.8.5~doc+ncurses+openssl+ownlibs~qt >>>>>> arch=linux-centos7-x86_64 >>>>>> ^ncurses >>>>>> ^pkgconfig >>>>>> ^openssl >>>>>> ^perl@5.14.0: >>>>>> ^gdbm >>>>>> ^readline >>>>>> ^gmsh+netgen+oce+tetgen >>>>>> ^gmp >>>>>> ^autoconf >>>>>> ^m4@1.4.6: >>>>>> ^automake >>>>>> ^libtool@2.4.2: >>>>>> ^netgen >>>>>> ^oce >>>>>> ^tetgen >>>>>> ^hdf5@1.8.9:+hl+mpi >>>>>> ^intel-tbb@2019%gcc@4.8.5 cxxstd=default +shared+tm >>>>>> arch=linux-centos7-x86_64 >>>>>> ^metis@5:~int64+real64 >>>>>> ^muparser@2.2.5%gcc@4.8.5 arch=linux-centos7-x86_64 >>>>>> ^nanoflann >>>>>> ^netcdf+mpi >>>>>> ^p4est >>>>>> ^sundials~pthread >>>>>> ^trilinos+amesos+aztec+epetra+ifpack+ml+muelu+sacado+teuchos >>>>>> ^glm >>>>>> ^matio >>>>>> >>>>>> >>>>>> dealii requires suite-sparse version :5.1.0, but spec asked for 5.3.0 >>>>>> >>>>>> I wonder which is the source of the error and which files ( >>>>>> ~/.spack/linux/packages.yaml perhaps?) >>>>>> shall I edit to sort out the issue. >>>>>> >>>>>> Many thanks in advance >>>>>> >>>>>> Alberto >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> Informativa sulla Privacy: http://www.unibs.it/node/8155 >>>>>> >>>>>> -- >>>>>> The deal.II project is located at http://www.dealii.org/ >>>>>> For mailing list/forum options, see >>>>>> https://groups.google.com/d/forum/dealii?hl=en >>>>>> --- >>>>>> You received this message because you are subscribed to the Google >>>>>> Groups "deal.II User Group" group. >>>>>> To unsubscribe from this group and stop receiving emails from it, send >>>>>> an email to dealii+unsubscr...@googlegroups.com. >>>>>> For more options, visit https://groups.google.com/d/optout. >>>>> >>>>> >>>>> -- >>>>> The deal.II project is located at http://www.dealii.org/ >>>>> For mailing list/forum options, see >>>>> https://groups.google.com/d/forum/dealii?hl=en >>>>> --- >>>>> You received this message because you are subscribed to the Google Groups >>>>> "deal.II User Group" group. >>>>> To unsubscribe from this group and stop receiving emails from it, send an >>>>> email to dealii+unsubscr...@googlegroups.com. >>>>> For more options, visit https://groups.google.com/d/optout. >>>> >>>> >>>> Informativa sulla Privacy: http://www.unibs.it/node/8155 >>>> >>>> -- >>>> The deal.II project is located at http://www.dealii.org/ >>>> For mailing list/forum options, see >>>> https://groups.google.com/d/forum/dealii?hl=en >>>> --- >>>> You received this message because you are subscribed to the Google Groups >>>> "deal.II User Group" group. >>>> To unsubscribe from this group and stop receiving emails from it, send an >>>> email to dealii+unsubscr...@googlegroups.com. >>>> For more options, visit https://groups.google.com/d/optout. >>> >>> >>> -- >>> The deal.II project is located at http://www.dealii.org/ >>> For mailing list/forum options, see >>> https://groups.google.com/d/forum/dealii?hl=en >>> --- >>> You received this message because you are subscribed to the Google Groups >>> "deal.II User Group" group. >>> To unsubscribe from this group and stop receiving emails from it, send an >>> email to dealii+unsubscr...@googlegroups.com. >>> For more options, visit https://groups.google.com/d/optout. >> >> >> Informativa sulla Privacy: http://www.unibs.it/node/8155 >> >> -- >> The deal.II project is located at http://www.dealii.org/ >> For mailing list/forum options, see >> https://groups.google.com/d/forum/dealii?hl=en >> --- >> You received this message because you are subscribed to the Google Groups >> "deal.II User Group" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to dealii+unsubscr...@googlegroups.com. >> For more options, visit https://groups.google.com/d/optout. > > -- > The deal.II project is located at http://www.dealii.org/ > For mailing list/forum options, see > https://groups.google.com/d/forum/dealii?hl=en > --- > You received this message because you are subscribed to the Google Groups > "deal.II User Group" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to dealii+unsubscr...@googlegroups.com. > For more options, visit https://groups.google.com/d/optout. -- Informativa sulla Privacy: http://www.unibs.it/node/8155 <http://www.unibs.it/node/8155> -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. 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