Hello, I want to install deal.ii (9.1.1) in the ubuntu 18.04 on Windows 10 WSL. I installed the software needed and there are no mistake reports during cmake and make install. The install process is shown in the txt file: Install Process.txt
When make test, all tests are failed,(details please see quicktests.log) ../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to 'Teuchos::details::safeCommFree(int*)' ../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to 'Epetra_MpiComm::Epetra_MpiComm(int)' collect2: error: ld returned 1 exit status Can someone help me to solve this problem? Thanks. Zhenbang Wei -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion on the web visit https://groups.google.com/d/msgid/dealii/f67bbd64-8bf2-429f-be59-240f061e0aab%40googlegroups.com. For more options, visit https://groups.google.com/d/optout.
Change the apt-get repository： sudo cp /etc/apt/sources.list /etc/apt/sources.list.bak sudo vim /etc/apt/sources.list ：%d Add the context as follows: deb https://mirrors.tuna.tsinghua.edu.cn/ubuntu/ bionic main restricted universe multiverse # deb-src https://mirrors.tuna.tsinghua.edu.cn/ubuntu/ bionic main restricted universe multiverse deb https://mirrors.tuna.tsinghua.edu.cn/ubuntu/ bionic-updates main restricted universe multiverse # deb-src https://mirrors.tuna.tsinghua.edu.cn/ubuntu/ bionic-updates main restricted universe multiverse deb https://mirrors.tuna.tsinghua.edu.cn/ubuntu/ bionic-backports main restricted universe multiverse # deb-src https://mirrors.tuna.tsinghua.edu.cn/ubuntu/ bionic-backports main restricted universe multiverse deb https://mirrors.tuna.tsinghua.edu.cn/ubuntu/ bionic-security main restricted universe multiverse # deb-src https://mirrors.tuna.tsinghua.edu.cn/ubuntu/ bionic-security main restricted universe multiverse # 预发布软件源，不建议启用 # deb https://mirrors.tuna.tsinghua.edu.cn/ubuntu/ bionic-proposed main restricted universe multiverse # deb-src https://mirrors.tuna.tsinghua.edu.cn/ubuntu/ bionic-proposed main restricted universe multiverse :wq sudo apt-get update sudo apt-get upgrade =================================================================================================================== Environment of C language: sudo apt-get install gcc g++ gfortran make gdb cmake git build-essential libgtk-3-dev pkg-config devhelp curl gedit =================================================================================================================== Install Qt5: sudo apt-get install qt5-default qtcreator =================================================================================================================== Link the xlaunch： sudo vim /etc/profile Add the context: export DISPLAY=localhost:0 :wq source /etc/profile =================================================================================================================== Install mpich (Download from: https://www.mpich.org/static/downloads/3.3.1/mpich-3.3.1.tar.gz): tar -xzf ./mpich-3.3.1.tar.gz ./configure –prefix= /home/wzb198910/Software/mpich make make install sudo gedit /etc/profile Add the context: export MPICH=/home/wzb198910/Software/mpich export PATH=$MPICH/bin:$PATH export LD_LIBRARY_PATH=$MPICH/lib:$LD_LIBRARY_PATH export INCLUDE=$MPICH/include:$INCLUDE export CPATH=$MPICH/include:$CPATH export MANPATH=$MPICH/share/man:$MANPATH :wq source /etc/profile Test: cd /home/wzb198910/Software/mpich3.3.1/examples mpirun –n 4 ./cpi Result: Process 2 of 4 is on DESKTOP-9R5E9NA Process 1 of 4 is on DESKTOP-9R5E9NA Process 3 of 4 is on DESKTOP-9R5E9NA Process 0 of 4 is on DESKTOP-9R5E9NA pi is approximately 3.1415926544231239, Error is 0.0000000008333307 wall clock time = 0.000200 =================================================================================================================== Install gnuplot-x11, Paraview, Doxygen: sudo apt-get install gnuplot-x11 paraview doxygen =================================================================================================================== BOOST（>1.59: 1.65）： sudo apt-get install mpi-default-dev libicu-dev python-dev libbz2-dev libboost-dev libboost1.65-all-dev =================================================================================================================== adol-c(>2.64: 2.7 Download from: https://gitlab.com/adol-c/adol-c/-/archive/master/adol-c-master.tar.gz): tar -xzf adol-c-master.tar.gz cd adol-c-master autoreconf -fi ./configure --prefix=/home/wzb198910/Software/adol-c make && sudo make -j4 install sudo gedit /etc/ld.so.conf Add the context: include /home/wzb198910/Software/adol-c/lib64 Saved and then run: sudo ldconfig sudo gedit /etc/profile Add the context: export ADOLC=/home/wzb198910/Software/adol-c export LD_LIBRARY_PATH=$ADOLC/lib64:$LD_LIBRARY_PATH export INCLUDE=$ADOLC/include:$INCLUDE export CPATH=$ADOLC/include:$CPATH Saved and then run: source /etc/profile =================================================================================================================== ARPACK： sudo apt-get install libarpack2-dev =================================================================================================================== assimp： sudo apt-get install libassimp4 libassimp-dev assimp-utils =================================================================================================================== BLAS/LAPACK sudo apt-get install libblas-dev liblapack-dev =================================================================================================================== cuda (not install) =================================================================================================================== Ginkgo （not install） =================================================================================================================== Gmsh (3.06) sudo apt-get install gmsh =================================================================================================================== GSL: sudo apt-get install libgsl-dev =================================================================================================================== hdf5： sudo apt-get install libhdf5-mpich* =================================================================================================================== metis: sudo apt-get install libmetis5 libmetis-dev =================================================================================================================== muparser: sudo apt-get install libmuparser-dev =================================================================================================================== nanoflann:(not install) =================================================================================================================== netcdf: sudo apt-get install libnetcdf-dev libnetcdff-dev =================================================================================================================== OpenCASCADE(not install) =================================================================================================================== P4est(2.2 Download from: http://p4est.github.io/release/p4est-2.2.tar.gz ) tar -xzf p4est-2.2.tar.gz cd p4est-2.2 ./configure --prefix=/home/wzb198910/Software/p4est --enable-mpi && make && sudo make -j4 install sudo gedit /etc/profile Add the context: export P4EST=/home/wzb198910/Software/p4est export PATH=$P4EST/bin:$PATH export LD_LIBRARY_PATH=$P4EST/lib:$LD_LIBRARY_PATH export INCLUDE=$P4EST/include:$INCLUDE export CPATH=$P4EST/include:$CPATH Save then run: source /etc/profile =================================================================================================================== PETSc (3.11.3 Download from: http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-3.11.3.tar.gz) tar -xzf petsc-3.11.3.tar.gz cd petsc-3.11.3 ./configure --with-mpi-dir=/home/wzb198910/Software/mpich --prefix=/home/wzb198910/Software/petsc make PETSC_DIR=/home/wzb198910/Download/petsc-3.11.3 PETSC_ARCH=arch-linux2-c-debug all make PETSC_DIR=/home/wzb198910/Download/petsc-3.11.3 PETSC_ARCH=arch-linux2-c-debug -j4 install make PETSC_DIR=/home/wzb198910/Software/petsc PETSC_ARCH="" test sudo gedit /etc/profile Add the context: export PETSC=/home/wzb198910/Software/petsc export LD_LIBRARY_PATH=$PETSC/lib:$LD_LIBRARY_PATH export INCLUDE=$PETSC/include:$INCLUDE export CPATH=$PETSC/include:$CPATH Save then run: source /etc/profile =================================================================================================================== scalapack（2.0.2-4） sudo apt-get install libscalapack-mpich* =================================================================================================================== slepc(3.7.4) sudo apt-get install libslepc3.7.4-dev libslepc3.7.4 =================================================================================================================== sundials(2.7.0) sudo apt-get install libsundials-dev =================================================================================================================== symengine(Download from: https://codeload.github.com/symengine/symengine/zip/master) sudo apt-get install cmake libgmp-dev sudo apt install unzip unzip symengine-master.zip cd symengine mkdir build cd build cmake -DCMAKE_INSTALL_PREFIX=/home/wzb198910/Software/symengine .. make && sudo make -j4 install ctest sudo gedit /etc/profile Add the context: export SYMENGINE=/home/wzb198910/Software/symengine export LD_LIBRARY_PATH=$SYMENGINE/lib:$LD_LIBRARY_PATH export INCLUDE=$SYMENGINE/include:$INCLUDE export CPATH=$SYMENGINE/include:$CPATH Save then run: source /etc/profile =================================================================================================================== TBB: sudo apt-get install libtbb* =================================================================================================================== trilinos: sudo apt-get install trilinos-all-dev =================================================================================================================== umfpack sudo apt-get install libumfpack5 =================================================================================================================== DEAL.II (Donwload from: https://dealii.kyomu.43-1.org/downloads/dealii-9.1.1.tar.gz ) tar -xzf dealii-9.1.1.tar.gz cd dealii-9.1.1 mkdir build cd build cmake -DADOLC_DIR=/home/wzb198910/Software/adol-c -DP4EST_DIR=/home/wzb198910/Software/p4est -DDEAL_II_WITH_P4EST=ON -DDEAL_II_WITH_MPI=ON -DSYMENGINE_DIR=/home/wzb198910/Software/symengine -DPETSC_DIR=/home/wzb198910/Software/petsc -DCMAKE_INSTALL_PREFIX=/home/wzb198910/Software/dealii -DPETSC_ARCH=architecture .. sudo make -j4 install && make test sudo gedit /etc/profile Add the context: export DEAL_II_DIR=/home/wzb198910/Software/dealii export LD_LIBRARY_PATH=$DEAL_II_DIR/lib:$LD_LIBRARY_PATH export INCLUDE=$DEAL_II_DIR/include:$INCLUDE export CPATH=$DEAL_II_DIR/include:$CPATH Save then run: source /etc/profile
[HANDLER_OUTPUT]
Test project /home/wzb198910/Download/dealii-9.1.1/build/tests/quick_tests
Start 1: step.debug
Start 2: step.release
Start 3: affinity.debug
Start 4: mpi.debug
Start 5: tbb.debug
Start 6: p4est.debug
Start 7: step-petsc.debug
Start 8: step-trilinos.debug
1/20 Test #5: tbb.debug ........................***Failed 90.90 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/tbb.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/tbb.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/tbb.debug.run.dir/rule] Error 2
make[4]: *** [tbb.debug.run] Error 2
Test tbb.debug: BUILD
=============================== OUTPUT BEGIN ===============================
tbb.debug: BUILD failed. Output:
Scanning dependencies of target kill-tbb.debug-OK
[ 0%] Built target kill-tbb.debug-OK
[ 0%] Built target obj_sundials_inst
[ 1%] Built target obj_sundials_debug
[ 1%] Built target expand_instantiations_exe
[ 8%] Built target obj_numerics_inst
[ 24%] Built target obj_numerics_debug
[ 32%] Built target obj_fe_inst
[ 43%] Built target obj_fe_debug
[ 56%] Built target obj_dofs_inst
[ 60%] Built target obj_dofs_debug
[ 67%] Built target obj_lac_inst
[ 79%] Built target obj_lac_debug
[ 94%] Built target obj_base_inst
[108%] Built target obj_base_debug
[120%] Built target obj_gmsh_inst
[120%] Built target obj_gmsh_debug
[124%] Built target obj_grid_inst
[127%] Built target obj_grid_debug
[131%] Built target obj_hp_inst
[132%] Built target obj_hp_debug
[136%] Built target obj_multigrid_inst
[137%] Built target obj_multigrid_debug
[141%] Built target obj_distributed_inst
[143%] Built target obj_distributed_debug
[143%] Built target obj_algorithms_inst
[143%] Built target obj_algorithms_debug
[143%] Built target obj_matrix_free_inst
[144%] Built target obj_matrix_free_debug
[146%] Built target obj_meshworker_inst
[146%] Built target obj_meshworker_debug
[148%] Built target obj_opencascade_inst
[150%] Built target obj_opencascade_debug
[150%] Built target obj_particle_inst
[151%] Built target obj_particle_debug
[155%] Built target obj_differentiation_ad_inst
[156%] Built target obj_differentiation_ad_debug
[156%] Built target obj_differentiation_sd_inst
[158%] Built target obj_differentiation_sd_debug
[160%] Built target obj_physics_inst
[160%] Built target obj_physics_debug
[162%] Built target obj_physics_elasticity_inst
[162%] Built target obj_physics_elasticity_debug
[162%] Built target obj_non_matching_inst
[162%] Built target obj_non_matching_debug
[162%] Built target deal_II.g
Scanning dependencies of target tbb.debug
[162%] Building CXX object tests/quick_tests/CMakeFiles/tbb.debug.dir/tbb.cc.o
[163%] Linking CXX executable tbb.debug
tests/quick_tests/CMakeFiles/tbb.debug.dir/build.make:236: recipe for target
'tests/quick_tests/tbb.debug' failed
CMakeFiles/Makefile2:5259: recipe for target
'tests/quick_tests/CMakeFiles/tbb.debug.dir/all' failed
CMakeFiles/Makefile2:4814: recipe for target
'tests/quick_tests/CMakeFiles/tbb.debug.run.dir/rule' failed
Makefile:1568: recipe for target 'tbb.debug.run' failed
tbb.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
Start 9: step-metis.debug
2/20 Test #3: affinity.debug ...................***Failed 103.14 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/affinity.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/affinity.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/affinity.debug.run.dir/rule] Error 2
make[4]: *** [affinity.debug.run] Error 2
Test affinity.debug: BUILD
=============================== OUTPUT BEGIN ===============================
affinity.debug: BUILD failed. Output:
Scanning dependencies of target kill-affinity.debug-OK
[ 0%] Built target kill-affinity.debug-OK
[ 0%] Built target obj_sundials_inst
[ 1%] Built target obj_sundials_debug
[ 1%] Built target expand_instantiations_exe
[ 8%] Built target obj_numerics_inst
[ 24%] Built target obj_numerics_debug
[ 32%] Built target obj_fe_inst
[ 43%] Built target obj_fe_debug
[ 56%] Built target obj_dofs_inst
[ 60%] Built target obj_dofs_debug
[ 67%] Built target obj_lac_inst
[ 79%] Built target obj_lac_debug
[ 94%] Built target obj_base_inst
[108%] Built target obj_base_debug
[120%] Built target obj_gmsh_inst
[120%] Built target obj_gmsh_debug
[124%] Built target obj_grid_inst
[127%] Built target obj_grid_debug
[131%] Built target obj_hp_inst
[132%] Built target obj_hp_debug
[136%] Built target obj_multigrid_inst
[137%] Built target obj_multigrid_debug
[141%] Built target obj_distributed_inst
[143%] Built target obj_distributed_debug
[143%] Built target obj_algorithms_inst
[143%] Built target obj_algorithms_debug
[143%] Built target obj_matrix_free_inst
[144%] Built target obj_matrix_free_debug
[146%] Built target obj_meshworker_inst
[146%] Built target obj_meshworker_debug
[148%] Built target obj_opencascade_inst
[150%] Built target obj_opencascade_debug
[150%] Built target obj_particle_inst
[151%] Built target obj_particle_debug
[155%] Built target obj_differentiation_ad_inst
[156%] Built target obj_differentiation_ad_debug
[156%] Built target obj_differentiation_sd_inst
[158%] Built target obj_differentiation_sd_debug
[160%] Built target obj_physics_inst
[160%] Built target obj_physics_debug
[162%] Built target obj_physics_elasticity_inst
[162%] Built target obj_physics_elasticity_debug
[162%] Built target obj_non_matching_inst
[162%] Built target obj_non_matching_debug
[162%] Built target deal_II.g
Scanning dependencies of target affinity.debug
[162%] Building CXX object
tests/quick_tests/CMakeFiles/affinity.debug.dir/affinity.cc.o
[ 0%] Linking CXX executable affinity.debug
tests/quick_tests/CMakeFiles/affinity.debug.dir/build.make:236: recipe for
target 'tests/quick_tests/affinity.debug' failed
CMakeFiles/Makefile2:4840: recipe for target
'tests/quick_tests/CMakeFiles/affinity.debug.dir/all' failed
CMakeFiles/Makefile2:4749: recipe for target
'tests/quick_tests/CMakeFiles/affinity.debug.run.dir/rule' failed
Makefile:1542: recipe for target 'affinity.debug.run' failed
affinity.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
3/20 Test #6: p4est.debug ......................***Failed 103.26 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/p4est.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/p4est.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/p4est.debug.run.dir/rule] Error 2
make[4]: *** [p4est.debug.run] Error 2
Test p4est.debug: BUILD
=============================== OUTPUT BEGIN ===============================
p4est.debug: BUILD failed. Output:
Scanning dependencies of target kill-p4est.debug-OK
[ 0%] Built target kill-p4est.debug-OK
[ 0%] Built target obj_sundials_inst
[ 1%] Built target obj_sundials_debug
[ 1%] Built target expand_instantiations_exe
[ 8%] Built target obj_numerics_inst
[ 24%] Built target obj_numerics_debug
[ 32%] Built target obj_fe_inst
[ 43%] Built target obj_fe_debug
[ 56%] Built target obj_dofs_inst
[ 60%] Built target obj_dofs_debug
[ 67%] Built target obj_lac_inst
[ 79%] Built target obj_lac_debug
[ 94%] Built target obj_base_inst
[108%] Built target obj_base_debug
[120%] Built target obj_gmsh_inst
[120%] Built target obj_gmsh_debug
[124%] Built target obj_grid_inst
[127%] Built target obj_grid_debug
[131%] Built target obj_hp_inst
[132%] Built target obj_hp_debug
[136%] Built target obj_multigrid_inst
[137%] Built target obj_multigrid_debug
[141%] Built target obj_distributed_inst
[143%] Built target obj_distributed_debug
[143%] Built target obj_algorithms_inst
[143%] Built target obj_algorithms_debug
[143%] Built target obj_matrix_free_inst
[144%] Built target obj_matrix_free_debug
[146%] Built target obj_meshworker_inst
[146%] Built target obj_meshworker_debug
[148%] Built target obj_opencascade_inst
[150%] Built target obj_opencascade_debug
[150%] Built target obj_particle_inst
[151%] Built target obj_particle_debug
[155%] Built target obj_differentiation_ad_inst
[156%] Built target obj_differentiation_ad_debug
[156%] Built target obj_differentiation_sd_inst
[158%] Built target obj_differentiation_sd_debug
[160%] Built target obj_physics_inst
[160%] Built target obj_physics_debug
[162%] Built target obj_physics_elasticity_inst
[162%] Built target obj_physics_elasticity_debug
[162%] Built target obj_non_matching_inst
[162%] Built target obj_non_matching_debug
[162%] Built target deal_II.g
Scanning dependencies of target p4est.debug
[163%] Building CXX object
tests/quick_tests/CMakeFiles/p4est.debug.dir/p4est.cc.o
[ 23%] Linking CXX executable p4est.debug
tests/quick_tests/CMakeFiles/p4est.debug.dir/build.make:236: recipe for target
'tests/quick_tests/p4est.debug' failed
CMakeFiles/Makefile2:4387: recipe for target
'tests/quick_tests/CMakeFiles/p4est.debug.dir/all' failed
CMakeFiles/Makefile2:5298: recipe for target
'tests/quick_tests/CMakeFiles/p4est.debug.run.dir/rule' failed
Makefile:1763: recipe for target 'p4est.debug.run' failed
p4est.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
4/20 Test #4: mpi.debug ........................***Failed 103.31 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/mpi.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/mpi.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/mpi.debug.run.dir/rule] Error 2
make[4]: *** [mpi.debug.run] Error 2
Test mpi.debug: BUILD
=============================== OUTPUT BEGIN ===============================
mpi.debug: BUILD failed. Output:
Scanning dependencies of target kill-mpi.debug-OK
[ 0%] Built target kill-mpi.debug-OK
[ 0%] Built target obj_sundials_inst
[ 1%] Built target obj_sundials_debug
[ 1%] Built target expand_instantiations_exe
[ 8%] Built target obj_numerics_inst
[ 24%] Built target obj_numerics_debug
[ 32%] Built target obj_fe_inst
[ 43%] Built target obj_fe_debug
[ 56%] Built target obj_dofs_inst
[ 60%] Built target obj_dofs_debug
[ 67%] Built target obj_lac_inst
[ 79%] Built target obj_lac_debug
[ 94%] Built target obj_base_inst
[108%] Built target obj_base_debug
[120%] Built target obj_gmsh_inst
[120%] Built target obj_gmsh_debug
[124%] Built target obj_grid_inst
[127%] Built target obj_grid_debug
[131%] Built target obj_hp_inst
[132%] Built target obj_hp_debug
[136%] Built target obj_multigrid_inst
[137%] Built target obj_multigrid_debug
[141%] Built target obj_distributed_inst
[143%] Built target obj_distributed_debug
[143%] Built target obj_algorithms_inst
[143%] Built target obj_algorithms_debug
[143%] Built target obj_matrix_free_inst
[144%] Built target obj_matrix_free_debug
[146%] Built target obj_meshworker_inst
[146%] Built target obj_meshworker_debug
[148%] Built target obj_opencascade_inst
[150%] Built target obj_opencascade_debug
[150%] Built target obj_particle_inst
[151%] Built target obj_particle_debug
[155%] Built target obj_differentiation_ad_inst
[156%] Built target obj_differentiation_ad_debug
[156%] Built target obj_differentiation_sd_inst
[158%] Built target obj_differentiation_sd_debug
[160%] Built target obj_physics_inst
[160%] Built target obj_physics_debug
[162%] Built target obj_physics_elasticity_inst
[162%] Built target obj_physics_elasticity_debug
[162%] Built target obj_non_matching_inst
[162%] Built target obj_non_matching_debug
[162%] Built target deal_II.g
Scanning dependencies of target mpi.debug
[163%] Building CXX object tests/quick_tests/CMakeFiles/mpi.debug.dir/mpi.cc.o
[ 0%] Linking CXX executable mpi.debug
tests/quick_tests/CMakeFiles/mpi.debug.dir/build.make:236: recipe for target
'tests/quick_tests/mpi.debug' failed
CMakeFiles/Makefile2:4646: recipe for target
'tests/quick_tests/CMakeFiles/mpi.debug.dir/all' failed
CMakeFiles/Makefile2:4685: recipe for target
'tests/quick_tests/CMakeFiles/mpi.debug.run.dir/rule' failed
Makefile:1516: recipe for target 'mpi.debug.run' failed
mpi.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
Start 10: lapack.debug
Start 11: umfpack.debug
Start 12: gsl.debug
5/20 Test #7: step-petsc.debug .................***Failed 105.84 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/step-petsc.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/step-petsc.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/step-petsc.debug.run.dir/rule] Error
2
make[4]: *** [step-petsc.debug.run] Error 2
Test step-petsc.debug: BUILD
=============================== OUTPUT BEGIN ===============================
step-petsc.debug: BUILD failed. Output:
Scanning dependencies of target kill-step-petsc.debug-OK
[ 0%] Built target kill-step-petsc.debug-OK
[ 0%] Built target obj_sundials_inst
[ 1%] Built target obj_sundials_debug
[ 1%] Built target expand_instantiations_exe
[ 8%] Built target obj_numerics_inst
[ 24%] Built target obj_numerics_debug
[ 32%] Built target obj_fe_inst
[ 43%] Built target obj_fe_debug
[ 56%] Built target obj_dofs_inst
[ 60%] Built target obj_dofs_debug
[ 67%] Built target obj_lac_inst
[ 79%] Built target obj_lac_debug
[ 94%] Built target obj_base_inst
[108%] Built target obj_base_debug
[120%] Built target obj_gmsh_inst
[120%] Built target obj_gmsh_debug
[124%] Built target obj_grid_inst
[127%] Built target obj_grid_debug
[131%] Built target obj_hp_inst
[132%] Built target obj_hp_debug
[136%] Built target obj_multigrid_inst
[137%] Built target obj_multigrid_debug
[141%] Built target obj_distributed_inst
[143%] Built target obj_distributed_debug
[143%] Built target obj_algorithms_inst
[143%] Built target obj_algorithms_debug
[143%] Built target obj_matrix_free_inst
[144%] Built target obj_matrix_free_debug
[146%] Built target obj_meshworker_inst
[146%] Built target obj_meshworker_debug
[148%] Built target obj_opencascade_inst
[150%] Built target obj_opencascade_debug
[150%] Built target obj_particle_inst
[151%] Built target obj_particle_debug
[155%] Built target obj_differentiation_ad_inst
[156%] Built target obj_differentiation_ad_debug
[156%] Built target obj_differentiation_sd_inst
[158%] Built target obj_differentiation_sd_debug
[160%] Built target obj_physics_inst
[160%] Built target obj_physics_debug
[162%] Built target obj_physics_elasticity_inst
[162%] Built target obj_physics_elasticity_debug
[162%] Built target obj_non_matching_inst
[162%] Built target obj_non_matching_debug
[162%] Built target deal_II.g
Scanning dependencies of target step-petsc.debug
[163%] Building CXX object
tests/quick_tests/CMakeFiles/step-petsc.debug.dir/step-petsc.cc.o
[ 57%] Linking CXX executable step-petsc.debug
tests/quick_tests/CMakeFiles/step-petsc.debug.dir/build.make:236: recipe for
target 'tests/quick_tests/step-petsc.debug' failed
CMakeFiles/Makefile2:5421: recipe for target
'tests/quick_tests/CMakeFiles/step-petsc.debug.dir/all' failed
CMakeFiles/Makefile2:5492: recipe for target
'tests/quick_tests/CMakeFiles/step-petsc.debug.run.dir/rule' failed
Makefile:1841: recipe for target 'step-petsc.debug.run' failed
step-petsc.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
6/20 Test #8: step-trilinos.debug ..............***Failed 105.80 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/step-trilinos.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/step-trilinos.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/step-trilinos.debug.run.dir/rule]
Error 2
make[4]: *** [step-trilinos.debug.run] Error 2
Test step-trilinos.debug: BUILD
=============================== OUTPUT BEGIN ===============================
step-trilinos.debug: BUILD failed. Output:
Scanning dependencies of target kill-step-trilinos.debug-OK
[ 0%] Built target kill-step-trilinos.debug-OK
[ 0%] Built target obj_sundials_inst
[ 1%] Built target obj_sundials_debug
[ 1%] Built target expand_instantiations_exe
[ 8%] Built target obj_numerics_inst
[ 24%] Built target obj_numerics_debug
[ 32%] Built target obj_fe_inst
[ 43%] Built target obj_fe_debug
[ 56%] Built target obj_dofs_inst
[ 60%] Built target obj_dofs_debug
[ 67%] Built target obj_lac_inst
[ 79%] Built target obj_lac_debug
[ 94%] Built target obj_base_inst
[108%] Built target obj_base_debug
[120%] Built target obj_gmsh_inst
[120%] Built target obj_gmsh_debug
[124%] Built target obj_grid_inst
[127%] Built target obj_grid_debug
[131%] Built target obj_hp_inst
[132%] Built target obj_hp_debug
[136%] Built target obj_multigrid_inst
[137%] Built target obj_multigrid_debug
[141%] Built target obj_distributed_inst
[143%] Built target obj_distributed_debug
[143%] Built target obj_algorithms_inst
[143%] Built target obj_algorithms_debug
[143%] Built target obj_matrix_free_inst
[144%] Built target obj_matrix_free_debug
[146%] Built target obj_meshworker_inst
[146%] Built target obj_meshworker_debug
[148%] Built target obj_opencascade_inst
[150%] Built target obj_opencascade_debug
[150%] Built target obj_particle_inst
[151%] Built target obj_particle_debug
[155%] Built target obj_differentiation_ad_inst
[156%] Built target obj_differentiation_ad_debug
[156%] Built target obj_differentiation_sd_inst
[158%] Built target obj_differentiation_sd_debug
[160%] Built target obj_physics_inst
[160%] Built target obj_physics_debug
[162%] Built target obj_physics_elasticity_inst
[162%] Built target obj_physics_elasticity_debug
[162%] Built target obj_non_matching_inst
[162%] Built target obj_non_matching_debug
[162%] Built target deal_II.g
Scanning dependencies of target step-trilinos.debug
[163%] Building CXX object
tests/quick_tests/CMakeFiles/step-trilinos.debug.dir/step-trilinos.cc.o
[ 57%] Linking CXX executable step-trilinos.debug
tests/quick_tests/CMakeFiles/step-trilinos.debug.dir/build.make:236: recipe for
target 'tests/quick_tests/step-trilinos.debug' failed
CMakeFiles/Makefile2:5710: recipe for target
'tests/quick_tests/CMakeFiles/step-trilinos.debug.dir/all' failed
CMakeFiles/Makefile2:5040: recipe for target
'tests/quick_tests/CMakeFiles/step-trilinos.debug.run.dir/rule' failed
Makefile:1659: recipe for target 'step-trilinos.debug.run' failed
step-trilinos.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
Start 13: arpack.debug
Start 14: adolc.debug
7/20 Test #1: step.debug .......................***Failed 109.58 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/step.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/step.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/step.debug.run.dir/rule] Error 2
make[4]: *** [step.debug.run] Error 2
Test step.debug: BUILD
=============================== OUTPUT BEGIN ===============================
step.debug: BUILD failed. Output:
Scanning dependencies of target kill-step.debug-OK
[ 0%] Built target kill-step.debug-OK
[ 0%] Built target obj_sundials_inst
[ 0%] Built target obj_sundials_debug
[ 1%] Built target expand_instantiations_exe
[ 8%] Built target obj_numerics_inst
[ 24%] Built target obj_numerics_debug
[ 32%] Built target obj_fe_inst
[ 43%] Built target obj_fe_debug
[ 56%] Built target obj_dofs_inst
[ 60%] Built target obj_dofs_debug
[ 67%] Built target obj_lac_inst
[ 79%] Built target obj_lac_debug
[ 94%] Built target obj_base_inst
[108%] Built target obj_base_debug
[120%] Built target obj_gmsh_inst
[120%] Built target obj_gmsh_debug
[124%] Built target obj_grid_inst
[127%] Built target obj_grid_debug
[131%] Built target obj_hp_inst
[132%] Built target obj_hp_debug
[136%] Built target obj_multigrid_inst
[137%] Built target obj_multigrid_debug
[141%] Built target obj_distributed_inst
[143%] Built target obj_distributed_debug
[143%] Built target obj_algorithms_inst
[143%] Built target obj_algorithms_debug
[143%] Built target obj_matrix_free_inst
[144%] Built target obj_matrix_free_debug
[146%] Built target obj_meshworker_inst
[146%] Built target obj_meshworker_debug
[148%] Built target obj_opencascade_inst
[150%] Built target obj_opencascade_debug
[150%] Built target obj_particle_inst
[151%] Built target obj_particle_debug
[155%] Built target obj_differentiation_ad_inst
[156%] Built target obj_differentiation_ad_debug
[156%] Built target obj_differentiation_sd_inst
[158%] Built target obj_differentiation_sd_debug
[160%] Built target obj_physics_inst
[160%] Built target obj_physics_debug
[162%] Built target obj_physics_elasticity_inst
[162%] Built target obj_physics_elasticity_debug
[162%] Built target obj_non_matching_inst
[162%] Built target obj_non_matching_debug
[162%] Built target deal_II.g
Scanning dependencies of target step.debug
[163%] Building CXX object tests/quick_tests/CMakeFiles/step.debug.dir/step.cc.o
[ 3%] Linking CXX executable step.debug
tests/quick_tests/CMakeFiles/step.debug.dir/build.make:236: recipe for target
'tests/quick_tests/step.debug' failed
CMakeFiles/Makefile2:5066: recipe for target
'tests/quick_tests/CMakeFiles/step.debug.dir/all' failed
CMakeFiles/Makefile2:5814: recipe for target
'tests/quick_tests/CMakeFiles/step.debug.run.dir/rule' failed
Makefile:1971: recipe for target 'step.debug.run' failed
step.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
Start 15: sundials-ida.debug
8/20 Test #2: step.release .....................***Failed 116.20 sec
../../lib/libdeal_II.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
../../lib/libdeal_II.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/step.release] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/step.release.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/step.release.run.dir/rule] Error 2
make[4]: *** [step.release.run] Error 2
Test step.release: BUILD
=============================== OUTPUT BEGIN ===============================
step.release: BUILD failed. Output:
Scanning dependencies of target kill-step.release-OK
[ 0%] Built target kill-step.release-OK
[ 0%] Built target obj_sundials_inst
[ 1%] Built target obj_sundials_release
[ 1%] Built target expand_instantiations_exe
[ 8%] Built target obj_numerics_inst
[ 24%] Built target obj_numerics_release
[ 32%] Built target obj_fe_inst
[ 55%] Built target obj_fe_release
[ 56%] Built target obj_dofs_inst
[ 63%] Built target obj_dofs_release
[ 67%] Built target obj_lac_inst
[ 91%] Built target obj_lac_release
[ 94%] Built target obj_base_inst
[120%] Built target obj_base_release
[120%] Built target obj_gmsh_inst
[120%] Built target obj_gmsh_release
[124%] Built target obj_grid_inst
[131%] Built target obj_grid_release
[131%] Built target obj_hp_inst
[134%] Built target obj_hp_release
[136%] Built target obj_multigrid_inst
[139%] Built target obj_multigrid_release
[141%] Built target obj_distributed_inst
[143%] Built target obj_distributed_release
[143%] Built target obj_algorithms_inst
[143%] Built target obj_algorithms_release
[143%] Built target obj_matrix_free_inst
[146%] Built target obj_matrix_free_release
[146%] Built target obj_meshworker_inst
[148%] Built target obj_meshworker_release
[148%] Built target obj_opencascade_inst
[150%] Built target obj_opencascade_release
[150%] Built target obj_particle_inst
[153%] Built target obj_particle_release
[155%] Built target obj_differentiation_ad_inst
[156%] Built target obj_differentiation_ad_release
[156%] Built target obj_differentiation_sd_inst
[160%] Built target obj_differentiation_sd_release
[160%] Built target obj_physics_inst
[160%] Built target obj_physics_release
[162%] Built target obj_physics_elasticity_inst
[162%] Built target obj_physics_elasticity_release
[162%] Built target obj_non_matching_inst
[162%] Built target obj_non_matching_release
[162%] Built target deal_II
Scanning dependencies of target step.release
[163%] Building CXX object
tests/quick_tests/CMakeFiles/step.release.dir/step.cc.o
[ 3%] Linking CXX executable step.release
tests/quick_tests/CMakeFiles/step.release.dir/build.make:236: recipe for target
'tests/quick_tests/step.release' failed
CMakeFiles/Makefile2:4484: recipe for target
'tests/quick_tests/CMakeFiles/step.release.dir/all' failed
CMakeFiles/Makefile2:5233: recipe for target
'tests/quick_tests/CMakeFiles/step.release.run.dir/rule' failed
Makefile:1737: recipe for target 'step.release.run' failed
step.release: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
Start 16: assimp.debug
9/20 Test #14: adolc.debug ......................***Failed 65.51 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/adolc.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/adolc.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/adolc.debug.run.dir/rule] Error 2
make[4]: *** [adolc.debug.run] Error 2
Test adolc.debug: BUILD
=============================== OUTPUT BEGIN ===============================
adolc.debug: BUILD failed. Output:
Scanning dependencies of target kill-adolc.debug-OK
[ 1%] Built target kill-adolc.debug-OK
[ 10%] Built target obj_sundials_inst
[ 12%] Built target obj_sundials_debug
[ 0%] Built target expand_instantiations_exe
[ 15%] Built target obj_numerics_inst
[ 33%] Built target obj_numerics_debug
[ 37%] Built target obj_fe_inst
[ 44%] Built target obj_fe_debug
[ 1%] Built target obj_dofs_inst
[ 25%] Built target obj_dofs_debug
[ 43%] Built target obj_lac_inst
[ 68%] Built target obj_lac_debug
[ 70%] Built target obj_base_inst
[ 82%] Built target obj_base_debug
[ 86%] Built target obj_gmsh_inst
[ 87%] Built target obj_gmsh_debug
[ 89%] Built target obj_grid_inst
[ 91%] Built target obj_grid_debug
[ 94%] Built target obj_hp_inst
[ 96%] Built target obj_hp_debug
[ 98%] Built target obj_multigrid_inst
[ 98%] Built target obj_multigrid_debug
[ 98%] Built target obj_distributed_inst
[ 98%] Built target obj_distributed_debug
[100%] Built target obj_algorithms_inst
[100%] Built target obj_algorithms_debug
[100%] Built target obj_matrix_free_inst
[100%] Built target obj_matrix_free_debug
[100%] Built target obj_meshworker_inst
[100%] Built target obj_meshworker_debug
[100%] Built target obj_opencascade_inst
[100%] Built target obj_opencascade_debug
[100%] Built target obj_particle_inst
[100%] Built target obj_particle_debug
[100%] Built target obj_differentiation_ad_inst
[100%] Built target obj_differentiation_ad_debug
[100%] Built target obj_differentiation_sd_inst
[100%] Built target obj_differentiation_sd_debug
[100%] Built target obj_physics_inst
[100%] Built target obj_physics_debug
[100%] Built target obj_physics_elasticity_inst
[100%] Built target obj_physics_elasticity_debug
[100%] Built target obj_non_matching_inst
[100%] Built target obj_non_matching_debug
[100%] Built target deal_II.g
Scanning dependencies of target adolc.debug
[100%] Building CXX object
tests/quick_tests/CMakeFiles/adolc.debug.dir/adolc.cc.o
[101%] Linking CXX executable adolc.debug
tests/quick_tests/CMakeFiles/adolc.debug.dir/build.make:236: recipe for target
'tests/quick_tests/adolc.debug' failed
CMakeFiles/Makefile2:4224: recipe for target
'tests/quick_tests/CMakeFiles/adolc.debug.dir/all' failed
CMakeFiles/Makefile2:4198: recipe for target
'tests/quick_tests/CMakeFiles/adolc.debug.run.dir/rule' failed
Makefile:1321: recipe for target 'adolc.debug.run' failed
adolc.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
Start 17: scalapack.debug
10/20 Test #10: lapack.debug .....................***Failed 70.37 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/lapack.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/lapack.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/lapack.debug.run.dir/rule] Error 2
make[4]: *** [lapack.debug.run] Error 2
Test lapack.debug: BUILD
=============================== OUTPUT BEGIN ===============================
lapack.debug: BUILD failed. Output:
Scanning dependencies of target kill-lapack.debug-OK
[ 3%] Built target kill-lapack.debug-OK
[ 3%] Built target obj_sundials_inst
[ 0%] Built target obj_sundials_debug
[ 1%] Built target expand_instantiations_exe
[ 10%] Built target obj_numerics_inst
[ 20%] Built target obj_numerics_debug
[ 8%] Built target obj_fe_inst
[ 25%] Built target obj_fe_debug
[ 35%] Built target obj_dofs_inst
[ 40%] Built target obj_dofs_debug
[ 44%] Built target obj_lac_inst
[ 13%] Built target obj_lac_debug
[ 29%] Built target obj_base_inst
[ 56%] Built target obj_base_debug
[ 68%] Built target obj_gmsh_inst
[ 70%] Built target obj_gmsh_debug
[ 82%] Built target obj_grid_inst
[ 86%] Built target obj_grid_debug
[ 87%] Built target obj_hp_inst
[ 89%] Built target obj_hp_debug
[ 91%] Built target obj_multigrid_inst
[ 94%] Built target obj_multigrid_debug
[ 96%] Built target obj_distributed_inst
[ 98%] Built target obj_distributed_debug
[ 98%] Built target obj_algorithms_inst
[ 98%] Built target obj_algorithms_debug
[ 98%] Built target obj_matrix_free_inst
[100%] Built target obj_matrix_free_debug
[100%] Built target obj_meshworker_inst
[100%] Built target obj_meshworker_debug
[100%] Built target obj_opencascade_inst
[100%] Built target obj_opencascade_debug
[100%] Built target obj_particle_inst
[100%] Built target obj_particle_debug
[100%] Built target obj_differentiation_ad_inst
[100%] Built target obj_differentiation_ad_debug
[100%] Built target obj_differentiation_sd_inst
[100%] Built target obj_differentiation_sd_debug
[100%] Built target obj_physics_inst
[100%] Built target obj_physics_debug
[100%] Built target obj_physics_elasticity_inst
[100%] Built target obj_physics_elasticity_debug
[100%] Built target obj_non_matching_inst
[100%] Built target obj_non_matching_debug
[100%] Built target deal_II.g
Scanning dependencies of target lapack.debug
[100%] Building CXX object
tests/quick_tests/CMakeFiles/lapack.debug.dir/lapack.cc.o
[101%] Linking CXX executable lapack.debug
tests/quick_tests/CMakeFiles/lapack.debug.dir/build.make:236: recipe for target
'tests/quick_tests/lapack.debug' failed
CMakeFiles/Makefile2:5840: recipe for target
'tests/quick_tests/CMakeFiles/lapack.debug.dir/all' failed
CMakeFiles/Makefile2:5556: recipe for target
'tests/quick_tests/CMakeFiles/lapack.debug.run.dir/rule' failed
Makefile:1867: recipe for target 'lapack.debug.run' failed
lapack.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
Start 18: boost_zlib.debug
11/20 Test #12: gsl.debug ........................***Failed 78.02 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/gsl.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/gsl.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/gsl.debug.run.dir/rule] Error 2
make[4]: *** [gsl.debug.run] Error 2
Test gsl.debug: BUILD
=============================== OUTPUT BEGIN ===============================
gsl.debug: BUILD failed. Output:
Scanning dependencies of target kill-gsl.debug-OK
[ 3%] Built target kill-gsl.debug-OK
[ 3%] Built target obj_sundials_inst
[ 0%] Built target obj_sundials_debug
[ 1%] Built target expand_instantiations_exe
[ 10%] Built target obj_numerics_inst
[ 22%] Built target obj_numerics_debug
[ 8%] Built target obj_fe_inst
[ 25%] Built target obj_fe_debug
[ 35%] Built target obj_dofs_inst
[ 40%] Built target obj_dofs_debug
[ 44%] Built target obj_lac_inst
[ 22%] Built target obj_lac_debug
[ 39%] Built target obj_base_inst
[ 67%] Built target obj_base_debug
[ 68%] Built target obj_gmsh_inst
[ 70%] Built target obj_gmsh_debug
[ 82%] Built target obj_grid_inst
[ 86%] Built target obj_grid_debug
[ 87%] Built target obj_hp_inst
[ 89%] Built target obj_hp_debug
[ 91%] Built target obj_multigrid_inst
[ 94%] Built target obj_multigrid_debug
[ 96%] Built target obj_distributed_inst
[ 98%] Built target obj_distributed_debug
[ 98%] Built target obj_algorithms_inst
[ 98%] Built target obj_algorithms_debug
[ 98%] Built target obj_matrix_free_inst
[100%] Built target obj_matrix_free_debug
[100%] Built target obj_meshworker_inst
[100%] Built target obj_meshworker_debug
[100%] Built target obj_opencascade_inst
[100%] Built target obj_opencascade_debug
[100%] Built target obj_particle_inst
[100%] Built target obj_particle_debug
[100%] Built target obj_differentiation_ad_inst
[100%] Built target obj_differentiation_ad_debug
[100%] Built target obj_differentiation_sd_inst
[100%] Built target obj_differentiation_sd_debug
[100%] Built target obj_physics_inst
[100%] Built target obj_physics_debug
[100%] Built target obj_physics_elasticity_inst
[100%] Built target obj_physics_elasticity_debug
[100%] Built target obj_non_matching_inst
[100%] Built target obj_non_matching_debug
[100%] Built target deal_II.g
Scanning dependencies of target gsl.debug
[100%] Building CXX object tests/quick_tests/CMakeFiles/gsl.debug.dir/gsl.cc.o
[ 42%] Linking CXX executable gsl.debug
tests/quick_tests/CMakeFiles/gsl.debug.dir/build.make:236: recipe for target
'tests/quick_tests/gsl.debug' failed
CMakeFiles/Makefile2:5969: recipe for target
'tests/quick_tests/CMakeFiles/gsl.debug.dir/all' failed
CMakeFiles/Makefile2:5620: recipe for target
'tests/quick_tests/CMakeFiles/gsl.debug.run.dir/rule' failed
Makefile:1893: recipe for target 'gsl.debug.run' failed
gsl.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
Start 19: gmsh.debug
12/20 Test #9: step-metis.debug .................***Failed 94.58 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/step-metis.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/step-metis.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/step-metis.debug.run.dir/rule] Error
2
make[4]: *** [step-metis.debug.run] Error 2
Test step-metis.debug: BUILD
=============================== OUTPUT BEGIN ===============================
step-metis.debug: BUILD failed. Output:
Scanning dependencies of target kill-step-metis.debug-OK
[ 0%] Built target kill-step-metis.debug-OK
[ 0%] Built target obj_sundials_inst
[ 0%] Built target obj_sundials_debug
[ 0%] Built target expand_instantiations_exe
[ 6%] Built target obj_numerics_inst
[ 15%] Built target obj_numerics_debug
[ 23%] Built target obj_fe_inst
[ 33%] Built target obj_fe_debug
[ 35%] Built target obj_dofs_inst
[ 38%] Built target obj_dofs_debug
[ 42%] Built target obj_lac_inst
[ 54%] Built target obj_lac_debug
[ 57%] Built target obj_base_inst
[ 71%] Built target obj_base_debug
[ 71%] Built target obj_gmsh_inst
[ 71%] Built target obj_gmsh_debug
[ 74%] Built target obj_grid_inst
[ 3%] Built target obj_grid_debug
[ 3%] Built target obj_hp_inst
[ 5%] Built target obj_hp_debug
[ 1%] Built target obj_multigrid_inst
[ 3%] Built target obj_multigrid_debug
[ 12%] Built target obj_distributed_inst
[ 22%] Built target obj_distributed_debug
[ 8%] Built target obj_algorithms_inst
[ 15%] Built target obj_algorithms_debug
[ 25%] Built target obj_matrix_free_inst
[ 37%] Built target obj_matrix_free_debug
[ 40%] Built target obj_meshworker_inst
[ 44%] Built target obj_meshworker_debug
[ 13%] Built target obj_opencascade_inst
[ 31%] Built target obj_opencascade_debug
[ 43%] Built target obj_particle_inst
[ 68%] Built target obj_particle_debug
[ 70%] Built target obj_differentiation_ad_inst
[ 72%] Built target obj_differentiation_ad_debug
[ 82%] Built target obj_differentiation_sd_inst
[ 87%] Built target obj_differentiation_sd_debug
[ 87%] Built target obj_physics_inst
[ 89%] Built target obj_physics_debug
[ 93%] Built target obj_physics_elasticity_inst
[ 94%] Built target obj_physics_elasticity_debug
[ 96%] Built target obj_non_matching_inst
[ 98%] Built target obj_non_matching_debug
[ 98%] Built target deal_II.g
Scanning dependencies of target step-metis.debug
[100%] Building CXX object
tests/quick_tests/CMakeFiles/step-metis.debug.dir/step-metis.cc.o
[ 79%] Linking CXX executable step-metis.debug
tests/quick_tests/CMakeFiles/step-metis.debug.dir/build.make:236: recipe for
target 'tests/quick_tests/step-metis.debug' failed
CMakeFiles/Makefile2:4581: recipe for target
'tests/quick_tests/CMakeFiles/step-metis.debug.dir/all' failed
CMakeFiles/Makefile2:5201: recipe for target
'tests/quick_tests/CMakeFiles/step-metis.debug.run.dir/rule' failed
Makefile:1724: recipe for target 'step-metis.debug.run' failed
step-metis.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
Start 20: symengine.debug
13/20 Test #15: sundials-ida.debug ...............***Failed 79.41 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/sundials-ida.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/sundials-ida.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/sundials-ida.debug.run.dir/rule]
Error 2
make[4]: *** [sundials-ida.debug.run] Error 2
Test sundials-ida.debug: BUILD
=============================== OUTPUT BEGIN ===============================
sundials-ida.debug: BUILD failed. Output:
Scanning dependencies of target kill-sundials-ida.debug-OK
[ 15%] Built target kill-sundials-ida.debug-OK
[ 25%] Built target obj_sundials_inst
[ 35%] Built target obj_sundials_debug
[ 40%] Built target expand_instantiations_exe
[ 44%] Built target obj_numerics_inst
[ 22%] Built target obj_numerics_debug
[ 39%] Built target obj_fe_inst
[ 67%] Built target obj_fe_debug
[ 68%] Built target obj_dofs_inst
[ 70%] Built target obj_dofs_debug
[ 82%] Built target obj_lac_inst
[ 86%] Built target obj_lac_debug
[ 87%] Built target obj_base_inst
[ 91%] Built target obj_base_debug
[ 93%] Built target obj_gmsh_inst
[ 94%] Built target obj_gmsh_debug
[ 96%] Built target obj_grid_inst
[ 98%] Built target obj_grid_debug
[ 98%] Built target obj_hp_inst
[ 98%] Built target obj_hp_debug
[100%] Built target obj_multigrid_inst
[100%] Built target obj_multigrid_debug
[100%] Built target obj_distributed_inst
[100%] Built target obj_distributed_debug
[100%] Built target obj_algorithms_inst
[100%] Built target obj_algorithms_debug
[100%] Built target obj_matrix_free_inst
[100%] Built target obj_matrix_free_debug
[100%] Built target obj_meshworker_inst
[100%] Built target obj_meshworker_debug
[100%] Built target obj_opencascade_inst
[100%] Built target obj_opencascade_debug
[100%] Built target obj_particle_inst
[100%] Built target obj_particle_debug
[100%] Built target obj_differentiation_ad_inst
[100%] Built target obj_differentiation_ad_debug
[100%] Built target obj_differentiation_sd_inst
[100%] Built target obj_differentiation_sd_debug
[100%] Built target obj_physics_inst
[100%] Built target obj_physics_debug
[100%] Built target obj_physics_elasticity_inst
[100%] Built target obj_physics_elasticity_debug
[100%] Built target obj_non_matching_inst
[100%] Built target obj_non_matching_debug
[100%] Built target deal_II.g
Scanning dependencies of target sundials-ida.debug
[101%] Building CXX object
tests/quick_tests/CMakeFiles/sundials-ida.debug.dir/sundials-ida.cc.o
[ 11%] Linking CXX executable sundials-ida.debug
tests/quick_tests/CMakeFiles/sundials-ida.debug.dir/build.make:236: recipe for
target 'tests/quick_tests/sundials-ida.debug' failed
CMakeFiles/Makefile2:4873: recipe for target
'tests/quick_tests/CMakeFiles/sundials-ida.debug.dir/all' failed
CMakeFiles/Makefile2:4166: recipe for target
'tests/quick_tests/CMakeFiles/sundials-ida.debug.run.dir/rule' failed
Makefile:1308: recipe for target 'sundials-ida.debug.run' failed
sundials-ida.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
14/20 Test #16: assimp.debug .....................***Failed 73.87 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/assimp.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/assimp.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/assimp.debug.run.dir/rule] Error 2
make[4]: *** [assimp.debug.run] Error 2
Test assimp.debug: BUILD
=============================== OUTPUT BEGIN ===============================
assimp.debug: BUILD failed. Output:
Scanning dependencies of target kill-assimp.debug-OK
[ 39%] Built target kill-assimp.debug-OK
[ 43%] Built target obj_sundials_inst
[ 68%] Built target obj_sundials_debug
[ 70%] Built target expand_instantiations_exe
[ 79%] Built target obj_numerics_inst
[ 86%] Built target obj_numerics_debug
[ 87%] Built target obj_fe_inst
[ 89%] Built target obj_fe_debug
[ 91%] Built target obj_dofs_inst
[ 94%] Built target obj_dofs_debug
[ 96%] Built target obj_lac_inst
[ 98%] Built target obj_lac_debug
[ 98%] Built target obj_base_inst
[ 98%] Built target obj_base_debug
[100%] Built target obj_gmsh_inst
[100%] Built target obj_gmsh_debug
[100%] Built target obj_grid_inst
[100%] Built target obj_grid_debug
[100%] Built target obj_hp_inst
[100%] Built target obj_hp_debug
[100%] Built target obj_multigrid_inst
[100%] Built target obj_multigrid_debug
[100%] Built target obj_distributed_inst
[100%] Built target obj_distributed_debug
[100%] Built target obj_algorithms_inst
[100%] Built target obj_algorithms_debug
[100%] Built target obj_matrix_free_inst
[100%] Built target obj_matrix_free_debug
[100%] Built target obj_meshworker_inst
[100%] Built target obj_meshworker_debug
[100%] Built target obj_opencascade_inst
[100%] Built target obj_opencascade_debug
[100%] Built target obj_particle_inst
[100%] Built target obj_particle_debug
[100%] Built target obj_differentiation_ad_inst
[100%] Built target obj_differentiation_ad_debug
[100%] Built target obj_differentiation_sd_inst
[100%] Built target obj_differentiation_sd_debug
[100%] Built target obj_physics_inst
[100%] Built target obj_physics_debug
[101%] Built target obj_physics_elasticity_inst
[101%] Built target obj_physics_elasticity_debug
[101%] Built target obj_non_matching_inst
[101%] Built target obj_non_matching_debug
[101%] Built target deal_II.g
Scanning dependencies of target assimp.debug
[101%] Building CXX object
tests/quick_tests/CMakeFiles/assimp.debug.dir/assimp.cc.o
[ 0%] Linking CXX executable assimp.debug
tests/quick_tests/CMakeFiles/assimp.debug.dir/build.make:236: recipe for target
'tests/quick_tests/assimp.debug' failed
CMakeFiles/Makefile2:4127: recipe for target
'tests/quick_tests/CMakeFiles/assimp.debug.dir/all' failed
CMakeFiles/Makefile2:5684: recipe for target
'tests/quick_tests/CMakeFiles/assimp.debug.run.dir/rule' failed
Makefile:1919: recipe for target 'assimp.debug.run' failed
assimp.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
15/20 Test #11: umfpack.debug ....................***Failed 88.83 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/umfpack.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/umfpack.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/umfpack.debug.run.dir/rule] Error 2
make[4]: *** [umfpack.debug.run] Error 2
Test umfpack.debug: BUILD
=============================== OUTPUT BEGIN ===============================
umfpack.debug: BUILD failed. Output:
Scanning dependencies of target kill-umfpack.debug-OK
[ 3%] Built target kill-umfpack.debug-OK
[ 3%] Built target obj_sundials_inst
[ 0%] Built target obj_sundials_debug
[ 1%] Built target expand_instantiations_exe
[ 10%] Built target obj_numerics_inst
[ 22%] Built target obj_numerics_debug
[ 8%] Built target obj_fe_inst
[ 25%] Built target obj_fe_debug
[ 35%] Built target obj_dofs_inst
[ 40%] Built target obj_dofs_debug
[ 44%] Built target obj_lac_inst
[ 22%] Built target obj_lac_debug
[ 39%] Built target obj_base_inst
[ 67%] Built target obj_base_debug
[ 68%] Built target obj_gmsh_inst
[ 70%] Built target obj_gmsh_debug
[ 82%] Built target obj_grid_inst
[ 86%] Built target obj_grid_debug
[ 87%] Built target obj_hp_inst
[ 89%] Built target obj_hp_debug
[ 91%] Built target obj_multigrid_inst
[ 94%] Built target obj_multigrid_debug
[ 96%] Built target obj_distributed_inst
[ 98%] Built target obj_distributed_debug
[ 98%] Built target obj_algorithms_inst
[ 98%] Built target obj_algorithms_debug
[ 98%] Built target obj_matrix_free_inst
[100%] Built target obj_matrix_free_debug
[100%] Built target obj_meshworker_inst
[100%] Built target obj_meshworker_debug
[100%] Built target obj_opencascade_inst
[100%] Built target obj_opencascade_debug
[100%] Built target obj_particle_inst
[100%] Built target obj_particle_debug
[100%] Built target obj_differentiation_ad_inst
[100%] Built target obj_differentiation_ad_debug
[100%] Built target obj_differentiation_sd_inst
[100%] Built target obj_differentiation_sd_debug
[100%] Built target obj_physics_inst
[100%] Built target obj_physics_debug
[100%] Built target obj_physics_elasticity_inst
[100%] Built target obj_physics_elasticity_debug
[100%] Built target obj_non_matching_inst
[100%] Built target obj_non_matching_debug
[100%] Built target deal_II.g
Scanning dependencies of target umfpack.debug
[100%] Building CXX object
tests/quick_tests/CMakeFiles/umfpack.debug.dir/umfpack.cc.o
[ 25%] Linking CXX executable umfpack.debug
tests/quick_tests/CMakeFiles/umfpack.debug.dir/build.make:236: recipe for
target 'tests/quick_tests/umfpack.debug' failed
CMakeFiles/Makefile2:4775: recipe for target
'tests/quick_tests/CMakeFiles/umfpack.debug.dir/all' failed
CMakeFiles/Makefile2:5943: recipe for target
'tests/quick_tests/CMakeFiles/umfpack.debug.run.dir/rule' failed
Makefile:2023: recipe for target 'umfpack.debug.run' failed
umfpack.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
16/20 Test #13: arpack.debug .....................***Failed 87.72 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/arpack.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/arpack.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/arpack.debug.run.dir/rule] Error 2
make[4]: *** [arpack.debug.run] Error 2
Test arpack.debug: BUILD
=============================== OUTPUT BEGIN ===============================
arpack.debug: BUILD failed. Output:
Scanning dependencies of target kill-arpack.debug-OK
[ 1%] Built target kill-arpack.debug-OK
[ 10%] Built target obj_sundials_inst
[ 12%] Built target obj_sundials_debug
[ 0%] Built target expand_instantiations_exe
[ 15%] Built target obj_numerics_inst
[ 33%] Built target obj_numerics_debug
[ 37%] Built target obj_fe_inst
[ 44%] Built target obj_fe_debug
[ 44%] Built target obj_dofs_inst
[ 25%] Built target obj_dofs_debug
[ 43%] Built target obj_lac_inst
[ 68%] Built target obj_lac_debug
[ 70%] Built target obj_base_inst
[ 82%] Built target obj_base_debug
[ 86%] Built target obj_gmsh_inst
[ 87%] Built target obj_gmsh_debug
[ 89%] Built target obj_grid_inst
[ 91%] Built target obj_grid_debug
[ 94%] Built target obj_hp_inst
[ 96%] Built target obj_hp_debug
[ 98%] Built target obj_multigrid_inst
[ 98%] Built target obj_multigrid_debug
[ 98%] Built target obj_distributed_inst
[ 98%] Built target obj_distributed_debug
[100%] Built target obj_algorithms_inst
[100%] Built target obj_algorithms_debug
[100%] Built target obj_matrix_free_inst
[100%] Built target obj_matrix_free_debug
[100%] Built target obj_meshworker_inst
[100%] Built target obj_meshworker_debug
[100%] Built target obj_opencascade_inst
[100%] Built target obj_opencascade_debug
[100%] Built target obj_particle_inst
[100%] Built target obj_particle_debug
[100%] Built target obj_differentiation_ad_inst
[100%] Built target obj_differentiation_ad_debug
[100%] Built target obj_differentiation_sd_inst
[100%] Built target obj_differentiation_sd_debug
[100%] Built target obj_physics_inst
[100%] Built target obj_physics_debug
[100%] Built target obj_physics_elasticity_inst
[100%] Built target obj_physics_elasticity_debug
[100%] Built target obj_non_matching_inst
[100%] Built target obj_non_matching_debug
[100%] Built target deal_II.g
Scanning dependencies of target arpack.debug
[100%] Building CXX object
tests/quick_tests/CMakeFiles/arpack.debug.dir/arpack.cc.o
[ 29%] Linking CXX executable arpack.debug
tests/quick_tests/CMakeFiles/arpack.debug.dir/build.make:236: recipe for target
'tests/quick_tests/arpack.debug' failed
CMakeFiles/Makefile2:4354: recipe for target
'tests/quick_tests/CMakeFiles/arpack.debug.dir/all' failed
CMakeFiles/Makefile2:4328: recipe for target
'tests/quick_tests/CMakeFiles/arpack.debug.run.dir/rule' failed
Makefile:1373: recipe for target 'arpack.debug.run' failed
arpack.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
17/20 Test #17: scalapack.debug ..................***Failed 43.98 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/scalapack.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/scalapack.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/scalapack.debug.run.dir/rule] Error 2
make[4]: *** [scalapack.debug.run] Error 2
Test scalapack.debug: BUILD
=============================== OUTPUT BEGIN ===============================
scalapack.debug: BUILD failed. Output:
Scanning dependencies of target kill-scalapack.debug-OK
[ 0%] Built target kill-scalapack.debug-OK
[ 0%] Built target obj_sundials_inst
[ 0%] Built target obj_sundials_debug
[ 0%] Built target expand_instantiations_exe
[ 6%] Built target obj_numerics_inst
[ 8%] Built target obj_numerics_debug
[ 16%] Built target obj_fe_inst
[ 33%] Built target obj_fe_debug
[ 35%] Built target obj_dofs_inst
[ 38%] Built target obj_dofs_debug
[ 42%] Built target obj_lac_inst
[ 54%] Built target obj_lac_debug
[ 57%] Built target obj_base_inst
[ 71%] Built target obj_base_debug
[ 71%] Built target obj_gmsh_inst
[ 71%] Built target obj_gmsh_debug
[ 74%] Built target obj_grid_inst
[ 77%] Built target obj_grid_debug
[ 77%] Built target obj_hp_inst
[ 81%] Built target obj_hp_debug
[ 83%] Built target obj_multigrid_inst
[ 1%] Built target obj_multigrid_debug
[ 3%] Built target obj_distributed_inst
[ 8%] Built target obj_distributed_debug
[ 11%] Built target obj_algorithms_inst
[ 11%] Built target obj_algorithms_debug
[ 20%] Built target obj_matrix_free_inst
[ 23%] Built target obj_matrix_free_debug
[ 23%] Built target obj_meshworker_inst
[ 1%] Built target obj_meshworker_debug
[ 10%] Built target obj_opencascade_inst
[ 13%] Built target obj_opencascade_debug
[ 25%] Built target obj_particle_inst
[ 29%] Built target obj_particle_debug
[ 43%] Built target obj_differentiation_ad_inst
[ 48%] Built target obj_differentiation_ad_debug
[ 56%] Built target obj_differentiation_sd_inst
[ 70%] Built target obj_differentiation_sd_debug
[ 74%] Built target obj_physics_inst
[ 74%] Built target obj_physics_debug
[ 89%] Built target obj_physics_elasticity_inst
[ 89%] Built target obj_physics_elasticity_debug
[ 89%] Built target obj_non_matching_inst
[ 93%] Built target obj_non_matching_debug
[ 96%] Built target deal_II.g
Scanning dependencies of target scalapack.debug
[ 98%] Building CXX object
tests/quick_tests/CMakeFiles/scalapack.debug.dir/scalapack.cc.o
[105%] Linking CXX executable scalapack.debug
tests/quick_tests/CMakeFiles/scalapack.debug.dir/build.make:236: recipe for
target 'tests/quick_tests/scalapack.debug' failed
CMakeFiles/Makefile2:5743: recipe for target
'tests/quick_tests/CMakeFiles/scalapack.debug.dir/all' failed
CMakeFiles/Makefile2:4458: recipe for target
'tests/quick_tests/CMakeFiles/scalapack.debug.run.dir/rule' failed
Makefile:1425: recipe for target 'scalapack.debug.run' failed
scalapack.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
18/20 Test #20: symengine.debug ..................***Failed 30.95 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/symengine.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/symengine.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/symengine.debug.run.dir/rule] Error 2
make[4]: *** [symengine.debug.run] Error 2
Test symengine.debug: BUILD
=============================== OUTPUT BEGIN ===============================
symengine.debug: BUILD failed. Output:
Scanning dependencies of target kill-symengine.debug-OK
[ 10%] Built target kill-symengine.debug-OK
[ 12%] Built target obj_sundials_inst
[ 25%] Built target obj_sundials_debug
[ 27%] Built target expand_instantiations_exe
[ 39%] Built target obj_numerics_inst
[ 56%] Built target obj_numerics_debug
[ 56%] Built target obj_fe_inst
[ 74%] Built target obj_fe_debug
[ 87%] Built target obj_dofs_inst
[ 89%] Built target obj_dofs_debug
[ 89%] Built target obj_lac_inst
[ 96%] Built target obj_lac_debug
[ 96%] Built target obj_base_inst
[100%] Built target obj_base_debug
[101%] Built target obj_gmsh_inst
[101%] Built target obj_gmsh_debug
[101%] Built target obj_grid_inst
[101%] Built target obj_grid_debug
[103%] Built target obj_hp_inst
[103%] Built target obj_hp_debug
[103%] Built target obj_multigrid_inst
[103%] Built target obj_multigrid_debug
[103%] Built target obj_distributed_inst
[103%] Built target obj_distributed_debug
[103%] Built target obj_algorithms_inst
[103%] Built target obj_algorithms_debug
[103%] Built target obj_matrix_free_inst
[103%] Built target obj_matrix_free_debug
[103%] Built target obj_meshworker_inst
[103%] Built target obj_meshworker_debug
[103%] Built target obj_opencascade_inst
[103%] Built target obj_opencascade_debug
[103%] Built target obj_particle_inst
[103%] Built target obj_particle_debug
[103%] Built target obj_differentiation_ad_inst
[103%] Built target obj_differentiation_ad_debug
[103%] Built target obj_differentiation_sd_inst
[103%] Built target obj_differentiation_sd_debug
[103%] Built target obj_physics_inst
[105%] Built target obj_physics_debug
[105%] Built target obj_physics_elasticity_inst
[105%] Built target obj_physics_elasticity_debug
[105%] Built target obj_non_matching_inst
[105%] Built target obj_non_matching_debug
[105%] Built target deal_II.g
Scanning dependencies of target symengine.debug
[105%] Building CXX object
tests/quick_tests/CMakeFiles/symengine.debug.dir/symengine.cc.o
[105%] Linking CXX executable symengine.debug
tests/quick_tests/CMakeFiles/symengine.debug.dir/build.make:236: recipe for
target 'tests/quick_tests/symengine.debug' failed
CMakeFiles/Makefile2:4257: recipe for target
'tests/quick_tests/CMakeFiles/symengine.debug.dir/all' failed
CMakeFiles/Makefile2:5105: recipe for target
'tests/quick_tests/CMakeFiles/symengine.debug.run.dir/rule' failed
Makefile:1685: recipe for target 'symengine.debug.run' failed
symengine.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
19/20 Test #18: boost_zlib.debug .................***Failed 45.90 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/boost_zlib.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/boost_zlib.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/boost_zlib.debug.run.dir/rule] Error
2
make[4]: *** [boost_zlib.debug.run] Error 2
Test boost_zlib.debug: BUILD
=============================== OUTPUT BEGIN ===============================
boost_zlib.debug: BUILD failed. Output:
Scanning dependencies of target kill-boost_zlib.debug-OK
[ 8%] Built target kill-boost_zlib.debug-OK
[ 16%] Built target obj_sundials_inst
[ 16%] Built target obj_sundials_debug
[ 16%] Built target expand_instantiations_exe
[ 23%] Built target obj_numerics_inst
[ 38%] Built target obj_numerics_debug
[ 42%] Built target obj_fe_inst
[ 57%] Built target obj_fe_debug
[ 57%] Built target obj_dofs_inst
[ 57%] Built target obj_dofs_debug
[ 71%] Built target obj_lac_inst
[ 74%] Built target obj_lac_debug
[ 74%] Built target obj_base_inst
[ 81%] Built target obj_base_debug
[ 83%] Built target obj_gmsh_inst
[ 1%] Built target obj_gmsh_debug
[ 6%] Built target obj_grid_inst
[ 11%] Built target obj_grid_debug
[ 11%] Built target obj_hp_inst
[ 13%] Built target obj_hp_debug
[ 22%] Built target obj_multigrid_inst
[ 23%] Built target obj_multigrid_debug
[ 1%] Built target obj_distributed_inst
[ 12%] Built target obj_distributed_debug
[ 12%] Built target obj_algorithms_inst
[ 25%] Built target obj_algorithms_debug
[ 27%] Built target obj_matrix_free_inst
[ 41%] Built target obj_matrix_free_debug
[ 46%] Built target obj_meshworker_inst
[ 56%] Built target obj_meshworker_debug
[ 56%] Built target obj_opencascade_inst
[ 74%] Built target obj_opencascade_debug
[ 74%] Built target obj_particle_inst
[ 87%] Built target obj_particle_debug
[ 89%] Built target obj_differentiation_ad_inst
[ 89%] Built target obj_differentiation_ad_debug
[ 93%] Built target obj_differentiation_sd_inst
[ 96%] Built target obj_differentiation_sd_debug
[ 96%] Built target obj_physics_inst
[ 98%] Built target obj_physics_debug
[100%] Built target obj_physics_elasticity_inst
[100%] Built target obj_physics_elasticity_debug
[101%] Built target obj_non_matching_inst
[101%] Built target obj_non_matching_debug
[101%] Built target deal_II.g
Scanning dependencies of target boost_zlib.debug
[103%] Building CXX object
tests/quick_tests/CMakeFiles/boost_zlib.debug.dir/boost_zlib.cc.o
[105%] Linking CXX executable boost_zlib.debug
tests/quick_tests/CMakeFiles/boost_zlib.debug.dir/build.make:236: recipe for
target 'tests/quick_tests/boost_zlib.debug' failed
CMakeFiles/Makefile2:4094: recipe for target
'tests/quick_tests/CMakeFiles/boost_zlib.debug.dir/all' failed
CMakeFiles/Makefile2:4426: recipe for target
'tests/quick_tests/CMakeFiles/boost_zlib.debug.run.dir/rule' failed
Makefile:1412: recipe for target 'boost_zlib.debug.run' failed
boost_zlib.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
20/20 Test #19: gmsh.debug .......................***Failed 42.62 sec
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Teuchos::details::safeCommFree(int*)'
../../lib/libdeal_II.g.so.9.1.1: error: undefined reference to
'Epetra_MpiComm::Epetra_MpiComm(int)'
collect2: error: ld returned 1 exit status
make[7]: *** [tests/quick_tests/gmsh.debug] Error 1
make[6]: *** [tests/quick_tests/CMakeFiles/gmsh.debug.dir/all] Error 2
make[5]: *** [tests/quick_tests/CMakeFiles/gmsh.debug.run.dir/rule] Error 2
make[4]: *** [gmsh.debug.run] Error 2
Test gmsh.debug: BUILD
=============================== OUTPUT BEGIN ===============================
gmsh.debug: BUILD failed. Output:
Scanning dependencies of target kill-gmsh.debug-OK
[ 1%] Built target kill-gmsh.debug-OK
[ 6%] Built target obj_sundials_inst
[ 11%] Built target obj_sundials_debug
[ 11%] Built target expand_instantiations_exe
[ 20%] Built target obj_numerics_inst
[ 32%] Built target obj_numerics_debug
[ 10%] Built target obj_fe_inst
[ 24%] Built target obj_fe_debug
[ 27%] Built target obj_dofs_inst
[ 32%] Built target obj_dofs_debug
[ 46%] Built target obj_lac_inst
[ 68%] Built target obj_lac_debug
[ 74%] Built target obj_base_inst
[ 87%] Built target obj_base_debug
[ 89%] Built target obj_gmsh_inst
[ 89%] Built target obj_gmsh_debug
[ 93%] Built target obj_grid_inst
[ 96%] Built target obj_grid_debug
[ 96%] Built target obj_hp_inst
[ 98%] Built target obj_hp_debug
[100%] Built target obj_multigrid_inst
[101%] Built target obj_multigrid_debug
[101%] Built target obj_distributed_inst
[101%] Built target obj_distributed_debug
[101%] Built target obj_algorithms_inst
[101%] Built target obj_algorithms_debug
[103%] Built target obj_matrix_free_inst
[103%] Built target obj_matrix_free_debug
[103%] Built target obj_meshworker_inst
[103%] Built target obj_meshworker_debug
[103%] Built target obj_opencascade_inst
[103%] Built target obj_opencascade_debug
[103%] Built target obj_particle_inst
[103%] Built target obj_particle_debug
[103%] Built target obj_differentiation_ad_inst
[103%] Built target obj_differentiation_ad_debug
[103%] Built target obj_differentiation_sd_inst
[103%] Built target obj_differentiation_sd_debug
[103%] Built target obj_physics_inst
[103%] Built target obj_physics_debug
[103%] Built target obj_physics_elasticity_inst
[103%] Built target obj_physics_elasticity_debug
[103%] Built target obj_non_matching_inst
[103%] Built target obj_non_matching_debug
[103%] Built target deal_II.g
Scanning dependencies of target gmsh.debug
[105%] Building CXX object tests/quick_tests/CMakeFiles/gmsh.debug.dir/gmsh.cc.o
[105%] Linking CXX executable gmsh.debug
tests/quick_tests/CMakeFiles/gmsh.debug.dir/build.make:236: recipe for target
'tests/quick_tests/gmsh.debug' failed
CMakeFiles/Makefile2:5388: recipe for target
'tests/quick_tests/CMakeFiles/gmsh.debug.dir/all' failed
CMakeFiles/Makefile2:4976: recipe for target
'tests/quick_tests/CMakeFiles/gmsh.debug.run.dir/rule' failed
Makefile:1633: recipe for target 'gmsh.debug.run' failed
gmsh.debug: ****** BUILD failed *******
=============================== OUTPUT END ===============================
Expected stage PASSED - aborting
CMake Error at
/home/wzb198910/Download/dealii-9.1.1/cmake/scripts/run_test.cmake:140
(MESSAGE):
*** abort
0% tests passed, 20 tests failed out of 20
Total Test time (real) = 224.99 sec
The following tests FAILED:
1 - step.debug (Failed)
2 - step.release (Failed)
3 - affinity.debug (Failed)
4 - mpi.debug (Failed)
5 - tbb.debug (Failed)
6 - p4est.debug (Failed)
7 - step-petsc.debug (Failed)
8 - step-trilinos.debug (Failed)
9 - step-metis.debug (Failed)
10 - lapack.debug (Failed)
11 - umfpack.debug (Failed)
12 - gsl.debug (Failed)
13 - arpack.debug (Failed)
14 - adolc.debug (Failed)
15 - sundials-ida.debug (Failed)
16 - assimp.debug (Failed)
17 - scalapack.debug (Failed)
18 - boost_zlib.debug (Failed)
19 - gmsh.debug (Failed)
20 - symengine.debug (Failed)
[ERROR_MESSAGE]
Errors while running CTest
run.cmake
Description: Binary data
