Thanks Luca, 
Will checkout the remote extension of VS Code. I think I may have used it 
in past to work remotely on our cluster but never inside a container.  

Thanks again both Daniel and Luca! Hoping to pick up dealii in the coming 
months

Best,
Bhavesh


On Sunday, 28 June 2020 01:43:51 UTC-5, Luca Heltai wrote:
>
> If you want to develop using an ide, you could use visual studio code, 
> with the remote development extension. This allows you to compile inside 
> the docker as if it was a local compiler (including code completion, and 
> debugging facilities):
>
> https://code.visualstudio.com/docs/remote/containers
>
> Best,
> Luca
>
> Il giorno 28 giu 2020, alle ore 03:34, Bhavesh Shrimali <
> bhavesh...@gmail.com <javascript:>> ha scritto:
>
> 
> Hi Luca, 
>
> Thanks a lot for the reply! After a fresh pull of the container (with vim 
> installed) and changing CMakeLists.txt accordingly, everything works like 
> charm  
>
>
> Best,
> Bhavesh
>
> On Saturday, 27 June 2020 01:58:07 UTC-5, Luca Heltai wrote:
>>
>> Are you using an example from deal.II master? If this is the case, the 
>> example looks for 9.3pre but the image we provide only has 9.1 installed. 
>>  Try inspecting the CMakeList.txt to see which version is being looked for, 
>> and try changing to 9.1. 
>>
>> Luca
>>
>> Il giorno 27 giu 2020, alle ore 06:58, Bhavesh Shrimali <
>> bhavesh...@gmail.com> ha scritto:
>>
>> 
>> Hi Daniel, 
>>
>> Thanks for your reply. So the error above was pretty obvious 
>>
>> So I was going to update this after today's try. I did see (after posting 
>> this) yesterday that I could see
>>
>> /usr/includ/deal.II
>>
>> the directories therein. Also I sourced  `.bashrc` in /home/dealii, which 
>> I thought would set the proper paths. I couldn't view the contents of 
>> .bashrc (my bad that I didn't install a text editor inside the container). 
>> Now it at least (perhaps) locates deal.II properly, but throws:
>>
>> bshrima2@golubh1:/projects/meca/bshrima2/Deal2/examples/step-1$ cmake .
>> -- The C compiler identification is GNU 7.5.0
>> -- The CXX compiler identification is unknown
>> -- Check for working C compiler: /usr/bin/gcc
>> -- Check for working C compiler: /usr/bin/gcc -- works
>> -- Detecting C compiler ABI info
>> -- Detecting C compiler ABI info - done
>> -- Detecting C compile features
>> -- Detecting C compile features - done
>> CMake Error at CMakeLists.txt:38 (PROJECT):
>>   The CMAKE_CXX_COMPILER:
>>
>>     /usr/local/gcc/7.2.0/bin/c++
>>
>>   is not a full path to an existing compiler tool.
>>
>>   Tell CMake where to find the compiler by setting either the environment
>>   variable "CXX" or the CMake cache entry CMAKE_CXX_COMPILER to the full 
>> path
>>   to the compiler, or to the compiler name if it is in the PATH.
>>
>>
>> I am using cmake/3.12 that is installed on our cluster. I would update 
>> the container with a text editor and redo the entire process. 
>>
>> As for building step-1, I copied step-1.cc and CMakeLists.txt in a new 
>> folder and did `cmake .` following the instructions on the dealii website. 
>>
>> Thanks
>> Bhavesh
>>
>> On Friday, 26 June 2020 23:04:14 UTC-5, Daniel Arndt wrote:
>>>
>>> Bhavesh,
>>>
>>> It's hard to tell if there is something going wrong and if so what it is 
>>> from just the information you provided.
>>> If you inspect your container can you find the deal.II library, i.e. the 
>>> include files and the shared library?
>>> If so, how did you try to invoke CMake when trying to build step-1? Do 
>>> you set any environment variables like DEAL_II_DIR?
>>>
>>> Best,
>>> Daniel
>>>
>>> Am Do., 25. Juni 2020 um 18:51 Uhr schrieb Bhavesh Shrimali <
>>> bhavesh...@gmail.com>:
>>>
>>>> Hi dealii users,
>>>>
>>>> I wanted to get started with dealii (and in the long run hopefully use 
>>>> it for my research). Naturally, I sought the easiest way forward through 
>>>> docker. Since I use Singularity more often than docker (due to seamless 
>>>> transition to running on our HPC cluster) I put together a container 
>>>> here <https://singularity-hub.org/collections/4492>. It basically 
>>>> pulls the corresponding `tagged` image from DockerHub 
>>>> <https://hub.docker.com/r/dealii/dealii/tags/> and installs a bunch of 
>>>> other libraries that I use in my research.
>>>>
>>>> However when I try to execute step-1 as listed in the tutorials section 
>>>> <https://dealii.org/developer/doxygen/deal.II/Tutorial.html>, it seems 
>>>> that dealii isn't installed on the docker image (or maybe I am missing 
>>>> something)
>>>>
>>>> CMake Error at CMakeLists.txt:30 (MESSAGE):
>>>>
>>>>
>>>>   *** Could not locate a (sufficiently recent) version of deal.II.  ***
>>>>
>>>>
>>>>
>>>>   You may want to either pass a flag -DDEAL_II_DIR=/path/to/deal.II to 
>>>> cmake
>>>>
>>>>   or set an environment variable "DEAL_II_DIR" that contains this path.
>>>>
>>>>
>>>> -- Configuring incomplete, errors occurred!
>>>>
>>>>
>>>>
>>>>
>>>> Does anyone know, what am I missing here ? 
>>>>
>>>> Thanks in advance! 
>>>>
>>>> -- 
>>>> The deal.II project is located at http://www.dealii.org/
>>>> For mailing list/forum options, see 
>>>> https://groups.google.com/d/forum/dealii?hl=en
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>>>> You received this message because you are subscribed to the Google 
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>>>> To view this discussion on the web visit 
>>>> https://groups.google.com/d/msgid/dealii/d2840b63-7278-4519-a8dc-1282035dad2ao%40googlegroups.com
>>>>  
>>>> <https://groups.google.com/d/msgid/dealii/d2840b63-7278-4519-a8dc-1282035dad2ao%40googlegroups.com?utm_medium=email&utm_source=footer>
>>>> .
>>>>
>>> -- 
>> The deal.II project is located at http://www.dealii.org/
>> For mailing list/forum options, see 
>> https://groups.google.com/d/forum/dealii?hl=en
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>>  
>> <https://groups.google.com/d/msgid/dealii/3a602a9e-51b3-445d-99a1-ed564c37ccc3o%40googlegroups.com?utm_medium=email&utm_source=footer>
>> .
>>
>> -- 
> The deal.II project is located at http://www.dealii.org/
> For mailing list/forum options, see 
> https://groups.google.com/d/forum/dealii?hl=en
> --- 
> You received this message because you are subscribed to the Google Groups 
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>  
> <https://groups.google.com/d/msgid/dealii/cc0f220f-1c6c-4bcb-a777-d7fc34545343o%40googlegroups.com?utm_medium=email&utm_source=footer>
> .
>
>

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