Hi, Wolfgang,
Oh, I see. Thank you very much.
Best,
Xiang
On Friday, 7 August 2020 11:12:18 UTC-7, Wolfgang Bangerth wrote:
>
> On 8/7/20 12:05 PM, 孙翔 wrote:
> > Hi, Wolfgang,
> >
> > Thank you very much. Please see the following error message (red parts)
> which
> > is all I get from the Github version.
> >
> >
> > Scanning dependencies of target thm
> > [ 20%] Building CXX object CMakeFiles/thm.dir/src/main.cc.o
> > In file included from /home/shyaan/thm/src/main.cc:8:0:
> > /home/shyaan/thm/./include/geothermal.h: In instantiation of ‘class
> CoupledTH<3>’:
> > /home/shyaan/thm/src/main.cc:30:35: required from here
> > /home/shyaan/thm/./include/geothermal.h:112:45: error: cannot declare
> field
> > ‘CoupledTH<3>::triangulation’ to be of abstract type
> > ‘dealii::parallel::distributed::Triangulation<3, 3>’
> > parallel::distributed::Triangulation<dim> triangulation; // grid
> > ^~~~~~~~~~~~~
>
> Ah -- you are trying to use parallel::distributed::Triangulation but you
> don't
> have the p4est library available (or, at least, cmake has not detected
> it).
>
> In your build directory, run 'cmake .' and in the summary at the end,
> check
> that DEAL_II_WITH_P4EST says "set up with external dependencies". If it
> isn't,
> then you probably forgot to install p4est on that machine, or you forgot
> to
> tell cmake where it can be found.
>
> There are a *lot* of warnings below. You should really try to address
> those --
> otherwise, how will you know whether all of these things the compiler
> tells
> you about are harmless or not?
>
> Best
> W.
>
> > In file included from /home/shyaan/thm/src/main.cc:8:0:
> > /home/shyaan/thm/./include/geothermal.h: In instantiation of
> > ‘CoupledTH<dim>::CoupledTH(unsigned int) [with int dim = 3]’:
> > /home/shyaan/thm/src/main.cc:30:37: required from here
> > /home/shyaan/thm/./include/geothermal.h:125:22: warning:
> > ‘CoupledTH<3>::degree’ will be initialized after [-Wreorder]
> > const unsigned int degree; // element degree
> > ^~~~~~
> > /home/shyaan/thm/./include/geothermal.h:116:15: warning:
> ‘dealii::QGauss<3>
> > CoupledTH<3>::quadrature_formula’ [-Wreorder]
> > QGauss<dim> quadrature_formula;
> > ^~~~~~~~~~~~~~~~~~
> > /home/shyaan/thm/./include/geothermal.h:161:1: warning: when
> initialized
> > here [-Wreorder]
> > CoupledTH<dim>::CoupledTH(const unsigned int degree) //
> initialization
> > ^~~~~~~~~~~~~~
> > /home/shyaan/thm/./include/geothermal.h:150:16: warning:
> > ‘CoupledTH<3>::T_iteration_namber’ will be initialized after [-Wreorder]
> > unsigned int T_iteration_namber;
> > ^~~~~~~~~~~~~~~~~~
> > /home/shyaan/thm/./include/geothermal.h:109:22: warning:
> > ‘dealii::ConditionalOStream CoupledTH<3>::pcout’ [-Wreorder]
> > ConditionalOStream pcout;
> > ^~~~~
> > /home/shyaan/thm/./include/geothermal.h:161:1: warning: when
> initialized
> > here [-Wreorder]
> > CoupledTH<dim>::CoupledTH(const unsigned int degree) //
> initialization
> > ^~~~~~~~~~~~~~
>
> > /home/shyaan/thm/./include/geothermal.h:622:51: warning: comparison
> between
> > signed and unsigned integer expressions [-Wsign-compare]
> > if(cell->face(face_no)->boundary_id() ==
> > In file included from /home/shyaan/thm/src/main.cc:1:0:
> > /home/shyaan/thm/./include/boundaryvalues.h: In instantiation of ‘double
> > EquationData::TemperatureNeumanBoundaryValues<dim>::value(const
> > dealii::Point<dim>&, unsigned int) const [with int dim = 3]’:
> > /home/shyaan/thm/src/main.cc:84:1: required from here
> > /home/shyaan/thm/./include/boundaryvalues.h:165:16: warning: unused
> variable
> > ‘time’ [-Wunused-variable]
> > const double time = this->get_time();
> > ^~~~
> > /home/shyaan/thm/./include/boundaryvalues.h:159:23: warning: unused
> parameter
> > ‘p’ [-Wunused-paramete]
> > const Point<dim>& p, const unsigned int /*component*/) const {
> > ^
> > In file included from /home/shyaan/thm/src/main.cc:6:0:
> > /home/shyaan/thm/./include/sourceterm.h: In instantiation of ‘double
> > EquationData::TemperatureSourceTerm<dim>::value(const
> dealii::Point<dim>&,
> > unsigned int) const [with int dim = 3]’:
> > /home/shyaan/thm/src/main.cc:84:1: required from here
> > /home/shyaan/thm/./include/sourceterm.h:74:16: warning: unused variable
> ‘time’
> > [-Wunused-variable]
> > const double time = this->get_time(); // get time
> > ^~~~
> > /home/shyaan/thm/./include/sourceterm.h:69:60: warning: unused parameter
> ‘p’
> > [-Wunused-parameter]
> > double TemperatureSourceTerm<dim>::value(const Point<dim>& p,
> > ^
> > In file included from /home/shyaan/thm/src/main.cc:1:0:
> > /home/shyaan/thm/./include/boundaryvalues.h: In instantiation of ‘double
> > EquationData::PressureNeumanBoundaryValues<dim>::value(const
> > dealii::Point<dim>&, unsigned int) const [with int dim = 3]’:
> > /home/shyaan/thm/src/main.cc:84:1: required from here
> > /home/shyaan/thm/./include/boundaryvalues.h:133:10: warning: unused
> variable
> > ‘time’ [-Wunused-variable]
> > double time = this->get_time(); // get time
> > ^~~~
> > /home/shyaan/thm/./include/boundaryvalues.h:128:23: warning: unused
> parameter
> > ‘p’ [-Wunused-paramete]
> > const Point<dim>& p, const unsigned int /*component*/) const {
> > ^
> > In file included from /home/shyaan/thm/src/main.cc:6:0:
> > /home/shyaan/thm/./include/sourceterm.h: In instantiation of ‘double
> > EquationData::PressureSourceTerm<dim>::value(const dealii::Point<dim>&,
> > unsigned int) const [with int dim = 3]’:
> > /home/shyaan/thm/src/main.cc:84:1: required from here
> > /home/shyaan/thm/./include/sourceterm.h:35:16: warning: unused variable
> ‘time’
> > [-Wunused-variable]
> > const double time = this->get_time(); // get time
> > ^~~~
> > /home/shyaan/thm/./include/sourceterm.h:30:57: warning: unused parameter
> ‘p’
> > [-Wunused-parameter]
> > double PressureSourceTerm<dim>::value(const Point<dim>& p,
> > ^
> > In file included from /home/shyaan/thm/src/main.cc:1:0:
> > /home/shyaan/thm/./include/boundaryvalues.h: In instantiation of ‘double
> > EquationData::TemperatureDirichletBoundaryValues<dim>::value(const
> > dealii::Point<dim>&, unsigned int) const [with int dim = 3]’:
> > /home/shyaan/thm/src/main.cc:84:1: required from here
> > /home/shyaan/thm/./include/boundaryvalues.h:81:16: warning: unused
> variable
> > ‘time’ [-Wunused-variabl]
> > const double time = this->get_time();
> > ^~~~
> > /home/shyaan/thm/./include/boundaryvalues.h: In instantiation of ‘double
> > EquationData::PressureDirichletBoundaryValues<dim>::value(const
> > dealii::Point<dim>&, unsigned int) const [with int dim = 3]’:
> > /home/shyaan/thm/src/main.cc:84:1: required from here
> > /home/shyaan/thm/./include/boundaryvalues.h:40:16: warning: unused
> variable
> > ‘time’ [-Wunused-variabl]
> > const double time = this->get_time(); // get time
> > ^~~~
> > In file included from /home/shyaan/thm/src/main.cc:6:0:
> > /home/shyaan/thm/./include/sourceterm.h: In member function ‘double
> > EquationData::PressureSourceTerm<dim>::value(const dealii::Point<dim>&,
> > unsigned int) const [with int dim = 3]’:
> > /home/shyaan/thm/./include/sourceterm.h:44:1: warning: control reaches
> end of
> > non-void function [-Wreturn-type]
> > }
> > ^
> > In file included from /home/shyaan/thm/src/main.cc:1:0:
> > /home/shyaan/thm/./include/boundaryvalues.h: In member function ‘double
> > EquationData::PressureNeumanBoundaryValues<dim>::value(const
> > dealii::Point<dim>&, unsigned int) const [with int dim = 3]’:
> > /home/shyaan/thm/./include/boundaryvalues.h:137:1: warning: control
> reaches
> > end of non-void function [-Wreturn-type]
> > }
> > ^
> > /home/shyaan/thm/./include/boundaryvalues.h: In member function ‘double
> > EquationData::TemperatureNeumanBoundaryValues<dim>::value(const
> > dealii::Point<dim>&, unsigned int) const [with int dim = 3]’:
> > /home/shyaan/thm/./include/boundaryvalues.h:174:1: warning: control
> reaches
> > end of non-void function [-Wreturn-type]
> > }
> > ^
> > /home/shyaan/thm/./include/boundaryvalues.h: In member function ‘double
> > EquationData::PressureDirichletBoundaryValues<dim>::value(const
> > dealii::Point<dim>&, unsigned int) const [with int dim = 3]’:
> > /home/shyaan/thm/./include/boundaryvalues.h:53:1: warning: control
> reaches end
> > of non-void function -Wreturn-type]
> > }
> > ^
> > /home/shyaan/thm/./include/boundaryvalues.h: In member function ‘double
> > EquationData::TemperatureDirichletBoundaryValues<dim>::value(const
> > dealii::Point<dim>&, unsigned int) const [with int dim = 3]’:
> > /home/shyaan/thm/./include/boundaryvalues.h:98:1: warning: control
> reaches end
> > of non-void function -Wreturn-type]
> > }
> > ^
> > CMakeFiles/thm.dir/build.make:62: recipe for target
> > 'CMakeFiles/thm.dir/src/main.cc.o' failed
> > make[2]: *** [CMakeFiles/thm.dir/src/main.cc.o] Error 1
> > CMakeFiles/Makefile2:163: recipe for target 'CMakeFiles/thm.dir/all'
> failed
> > make[1]: *** [CMakeFiles/thm.dir/all] Error 2
> > Makefile:83: recipe for target 'all' failed
> > make: *** [all] Error 2
> >
> > On Friday, 7 August 2020 08:10:10 UTC-7, Wolfgang Bangerth wrote:
> >
> >
> > > Thank you for your reply. The complete code can be found on
> GitHub and
> > we also
> > > have the instruction for compiling the code on TACC in UTA. This
> code
> > is in
> > > the branch thm_seg_distributed. You may like to download it and
> build it.
> > >
> > > https://github.com/cb-geo/thm/tree/thm_seg_distributed
> > <
> https://nam01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fcb-geo%2Fthm%2Ftree%2Fthm_seg_distributed&data=02%7C01%7CWolfgang.Bangerth%40colostate.edu%7Cb0e1ddaef91d4f79ecf308d83afc6cd0%7Cafb58802ff7a4bb1ab21367ff2ecfc8b%7C0%7C0%7C637324203116115798&sdata=4hDFUzAdKHSL0kF83cwsiHjbvGcq%2BPJr59%2FD2wQfdng%3D&reserved=0>
>
>
> >
> > >
> > <
> https://nam01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fcb-geo%2Fthm%2Ftree%2Fthm_seg_distributed&data=02%7C01%7CWolfgang.Bangerth%40colostate.edu%7C27086d193c0142af7bd808d8399db8bc%7Cafb58802ff7a4bb1ab21367ff2ecfc8b%7C0%7C0%7C637322696859927190&sdata=Q40LdQEQ0g6X8dv%2BFnn%2BF44xtnrlGGiVg%2Fnp1rDaaL8%3D&reserved=0
>
> > <
> https://nam01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fcb-geo%2Fthm%2Ftree%2Fthm_seg_distributed&data=02%7C01%7CWolfgang.Bangerth%40colostate.edu%7Cb0e1ddaef91d4f79ecf308d83afc6cd0%7Cafb58802ff7a4bb1ab21367ff2ecfc8b%7C0%7C0%7C637324203116115798&sdata=4hDFUzAdKHSL0kF83cwsiHjbvGcq%2BPJr59%2FD2wQfdng%3D&reserved=0>>
>
>
> >
> >
> > Xiang,
> > this compiles fine for me. Can you show me the exact and complete
> error
> > message you get with the version on github?
> >
> > Best
> > W.
> >
> >
> > --
> >
> ------------------------------------------------------------------------
> > Wolfgang Bangerth email: bang...@colostate.edu
> <javascript:>
> > www:
> http://www.math.colostate.edu/~bangerth/
> > <http://www.math.colostate.edu/~bangerth/>
> >
> > --
> > The deal.II project is located at http://www.dealii.org/
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>
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>
>
>
> --
> ------------------------------------------------------------------------
> Wolfgang Bangerth email: bang...@colostate.edu
> <javascript:>
> www: http://www.math.colostate.edu/~bangerth/
>
>
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