Thanks Timo,
I tried to switch to master, but again the same thing happened.
So, now on the master branch of candi, same error.
I attached the log file, please take a look.
On Sunday, 13 March 2022 at 19:55:52 UTC Timo Heister wrote:
> What candi git branch are you on? You might need to switch to master to
> make things work for now.
>
> Can you post how you execute candi.sh including the first few pages of
> output?
>
> On Sun, Mar 13, 2022, 06:42 Masoud Ahmadi <[email protected]> wrote:
>
>> Dear Timo,
>>
>> No, I did not change anything; I did exactly what is explained in the
>> following link, step by step:
>> https://github.com/dealii/dealii/wiki/Apple-ARM-M1-OSX
>>
>> On Saturday, 12 March 2022 at 16:54:56 UTC Timo Heister wrote:
>>
>>> Did you make any changes to candi.cfg? Can you also please post how you
>>> execute candi.sh (what arguments)?
>>>
>>> On Mon, Mar 7, 2022, 12:23 Masoud Ahmadi <[email protected]> wrote:
>>>
>>>> Hi,
>>>>
>>>> I am trying to install dealii on a apple ARM M1 OSX, using the
>>>> following instructor:
>>>> https://github.com/dealii/dealii/wiki/Apple-ARM-M1-OSX
>>>>
>>>> However, I get the following error:
>>>>
>>>>
>>>> error: use of undeclared identifier 'H5Pset_dxpl_mpio'
>>>> status = H5Pset_dxpl_mpio(plist_id, H5FD_MPIO_INDEPENDENT);
>>>> ^
>>>> /Users/masoud/dealii-candi/tmp/unpack/deal.II-v9.3.3/source/lac/scalapack.cc:3242:63:
>>>>
>>>> warning: unused parameter 'filename' [-Wunused-parameter]
>>>> ScaLAPACKMatrix<NumberType>::load_parallel(const std::string &filename)
>>>> ^
>>>> /Users/masoud/dealii-candi/tmp/unpack/deal.II-v9.3.3/source/lac/scalapack.cc:2861:20:
>>>>
>>>> error: use of undeclared identifier 'H5Pset_fapl_mpio'
>>>> status = H5Pset_fapl_mpio(plist_id,
>>>> tmp.grid->mpi_communicator, info);
>>>> ^
>>>> /Users/masoud/dealii-candi/tmp/build/deal.II-v9.3.3/source/lac/scalapack.inst:10:16:
>>>>
>>>> note: in instantiation of member function
>>>> 'dealii::ScaLAPACKMatrix<double>::save_parallel' requested here
>>>> template class ScaLAPACKMatrix< double >;
>>>> ^
>>>> /Users/masoud/dealii-candi/tmp/unpack/deal.II-v9.3.3/source/lac/scalapack.cc:2861:20:
>>>>
>>>> error: use of undeclared identifier 'H5Pset_fapl_mpio'
>>>> status = H5Pset_fapl_mpio(plist_id,
>>>> tmp.grid->mpi_communicator, info);
>>>> ^
>>>> /Users/masoud/dealii-candi/tmp/build/deal.II-v9.3.3/source/lac/scalapack.inst:20:16:
>>>>
>>>> note: in instantiation of member function
>>>> 'dealii::ScaLAPACKMatrix<float>::save_parallel' requested here
>>>> template class ScaLAPACKMatrix< float >;
>>>> ^
>>>> 1 warning and 3 errors generated.
>>>>
>>>>
>>>> [image: Screenshot 2022-03-07 at 17.11.39.png]
>>>> [image: Screenshot 2022-03-07 at 17.15.11.png]
>>>>
>>>> --
>>>> The deal.II project is located at http://www.dealii.org/
>>>> For mailing list/forum options, see
>>>> https://groups.google.com/d/forum/dealii?hl=en
>>>> ---
>>>> You received this message because you are subscribed to the Google
>>>> Groups "deal.II User Group" group.
>>>> To unsubscribe from this group and stop receiving emails from it, send
>>>> an email to [email protected].
>>>> To view this discussion on the web visit
>>>> https://groups.google.com/d/msgid/dealii/5f96b566-3112-4dda-bb63-86e61b654156n%40googlegroups.com
>>>>
>>>> <https://groups.google.com/d/msgid/dealii/5f96b566-3112-4dda-bb63-86e61b654156n%40googlegroups.com?utm_medium=email&utm_source=footer>
>>>> .
>>>>
>>> --
>> The deal.II project is located at http://www.dealii.org/
>> For mailing list/forum options, see
>> https://groups.google.com/d/forum/dealii?hl=en
>> ---
>> You received this message because you are subscribed to the Google Groups
>> "deal.II User Group" group.
>> To unsubscribe from this group and stop receiving emails from it, send an
>> email to [email protected].
>>
> To view this discussion on the web visit
>> https://groups.google.com/d/msgid/dealii/957d0cc5-e3a8-4922-a770-794a3192a6a0n%40googlegroups.com
>>
>> <https://groups.google.com/d/msgid/dealii/957d0cc5-e3a8-4922-a770-794a3192a6a0n%40googlegroups.com?utm_medium=email&utm_source=footer>
>> .
>>
>
--
The deal.II project is located at http://www.dealii.org/
For mailing list/forum options, see
https://groups.google.com/d/forum/dealii?hl=en
---
You received this message because you are subscribed to the Google Groups
"deal.II User Group" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to [email protected].
To view this discussion on the web visit
https://groups.google.com/d/msgid/dealii/6fcaf535-65c6-4d28-84ef-ccabd4e12833n%40googlegroups.com.
Consolidate compiler generated dependencies of target expand_instantiations_exe
[ 0%] Built target expand_instantiations_exe
[ 0%] Built target doxygen_headers
Consolidate compiler generated dependencies of target
obj_boost_serialization_debug
[ 3%] Built target obj_boost_serialization_debug
Consolidate compiler generated dependencies of target
obj_boost_serialization_release
[ 5%] Built target obj_boost_serialization_release
Consolidate compiler generated dependencies of target obj_boost_system_debug
[ 5%] Built target obj_boost_system_debug
Consolidate compiler generated dependencies of target obj_boost_system_release
[ 5%] Built target obj_boost_system_release
Consolidate compiler generated dependencies of target obj_boost_iostreams_debug
[ 5%] Built target obj_boost_iostreams_debug
Consolidate compiler generated dependencies of target
obj_boost_iostreams_release
[ 5%] Built target obj_boost_iostreams_release
Consolidate compiler generated dependencies of target obj_muparser_debug
[ 6%] Built target obj_muparser_debug
Consolidate compiler generated dependencies of target obj_muparser_release
[ 6%] Built target obj_muparser_release
[ 6%] Built target obj_arborx_inst
Consolidate compiler generated dependencies of target obj_arborx_debug
[ 6%] Built target obj_arborx_debug
[ 9%] Built target obj_numerics_inst
Consolidate compiler generated dependencies of target obj_numerics_debug
[ 11%] Built target obj_numerics_debug
[ 14%] Built target obj_fe_inst
Consolidate compiler generated dependencies of target obj_fe_debug
[ 19%] Built target obj_fe_debug
[ 20%] Built target obj_dofs_inst
Consolidate compiler generated dependencies of target obj_dofs_debug
[ 21%] Built target obj_dofs_debug
[ 22%] Built target obj_lac_inst
Consolidate compiler generated dependencies of target obj_lac_debug
[ 22%] Building CXX object
source/lac/CMakeFiles/obj_lac_debug.dir/scalapack.cc.o
/Users/masoud/dealii-candi/tmp/unpack/deal.II-master/source/lac/scalapack.cc:2937:14:
error: use of undeclared identifier 'H5Pset_dxpl_mpio'
status = H5Pset_dxpl_mpio(plist_id, H5FD_MPIO_INDEPENDENT);
^
/Users/masoud/dealii-candi/tmp/unpack/deal.II-master/source/lac/scalapack.cc:3241:63:
warning: unused parameter 'filename' [-Wunused-parameter]
ScaLAPACKMatrix<NumberType>::load_parallel(const std::string &filename)
^
/Users/masoud/dealii-candi/tmp/unpack/deal.II-master/source/lac/scalapack.cc:2860:20:
error: use of undeclared identifier 'H5Pset_fapl_mpio'
status = H5Pset_fapl_mpio(plist_id, tmp.grid->mpi_communicator, info);
^
/Users/masoud/dealii-candi/tmp/build/deal.II-master/source/lac/scalapack.inst:10:16:
note: in instantiation of member function
'dealii::ScaLAPACKMatrix<double>::save_parallel' requested here
template class ScaLAPACKMatrix< double >;
^
/Users/masoud/dealii-candi/tmp/unpack/deal.II-master/source/lac/scalapack.cc:2860:20:
error: use of undeclared identifier 'H5Pset_fapl_mpio'
status = H5Pset_fapl_mpio(plist_id, tmp.grid->mpi_communicator, info);
^
/Users/masoud/dealii-candi/tmp/build/deal.II-master/source/lac/scalapack.inst:20:16:
note: in instantiation of member function
'dealii::ScaLAPACKMatrix<float>::save_parallel' requested here
template class ScaLAPACKMatrix< float >;
^
1 warning and 3 errors generated.
make[2]: *** [source/lac/CMakeFiles/obj_lac_debug.dir/scalapack.cc.o] Error 1
make[1]: *** [source/lac/CMakeFiles/obj_lac_debug.dir/all] Error 2
make: *** [all] Error 2
