Hi Dealii experts,
I am trying to use deal.ii through docker desktop on windows system.
I made the docker image pull : docker pull dealii/dealii:latest
and get into the image through: docker run -i -t dealii/dealii:latest
at the directory of /usr/local/examples, i am trying to run step-1 with
cmake .
I received below error message. is there a docker image work flow i can
follow?
sorry for this rookie question.
Thanks
Martin
///////////////////////////////////
dealii@692261f3d221:/usr/local/examples/step-1$ cmake .
-- Using the deal.II-9.4.0 installation found at /usr/local
-- Include macro
/usr/local/share/deal.II/macros/macro_deal_ii_add_test.cmake
-- Include macro
/usr/local/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake
-- Include macro
/usr/local/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake
-- Include macro
/usr/local/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake
-- Include macro
/usr/local/share/deal.II/macros/macro_deal_ii_query_git_information.cmake
-- Include macro
/usr/local/share/deal.II/macros/macro_deal_ii_setup_target.cmake
CMake Error at /usr/share/cmake-3.16/Modules/CMakeDetermineSystem.cmake:173
(file):
file failed to open for writing (No such file or directory):
/usr/local/examples/step-1/CMakeFiles/CMakeOutput.log
Call Stack (most recent call first):
CMakeLists.txt:38 (PROJECT)
CMake Error: Could not open file for write in copy operation
/usr/local/examples/step-1/CMakeFiles/3.16.3/CMakeSystem.cmake.tmp
CMake Error: : System Error: No such file or directory
CMake Error at /usr/share/cmake-3.16/Modules/CMakeDetermineSystem.cmake:185
(configure_file):
configure_file Problem configuring file
Call Stack (most recent call first):
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdC
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:116
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdC
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:116
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdC
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:116
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdC
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:116
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdC
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:116
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdC
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:116
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdC
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:116
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdC
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:116
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdC
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:116
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdC
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:116
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:879 (file):
file failed to open for writing (No such file or directory):
/usr/local/examples/step-1/CMakeFiles/CMakeError.log
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:60
(CMAKE_DETERMINE_COMPILER_ID_VENDOR)
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:116
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:879 (file):
file failed to open for writing (No such file or directory):
/usr/local/examples/step-1/CMakeFiles/CMakeError.log
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:60
(CMAKE_DETERMINE_COMPILER_ID_VENDOR)
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:116
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
-- The C compiler identification is unknown
CMake Error: Could not open file for write in copy operation
/usr/local/examples/step-1/CMakeFiles/3.16.3/CMakeCCompiler.cmake.tmp
CMake Error: : System Error: No such file or directory
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCCompiler.cmake:212
(configure_file):
configure_file Problem configuring file
Call Stack (most recent call first):
CMakeLists.txt:38 (PROJECT)
CMake Error: Could not find cmake module file:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CMakeCCompiler.cmake
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdCXX
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:111
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdCXX
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:111
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdCXX
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:111
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdCXX
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:111
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdCXX
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:111
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdCXX
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:111
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdCXX
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:111
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdCXX
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:111
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdCXX
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:111
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:228 (file):
file problem creating directory:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CompilerIdCXX
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:32
(CMAKE_DETERMINE_COMPILER_ID_BUILD)
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:111
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:879 (file):
file failed to open for writing (No such file or directory):
/usr/local/examples/step-1/CMakeFiles/CMakeError.log
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:60
(CMAKE_DETERMINE_COMPILER_ID_VENDOR)
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:111
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:879 (file):
file failed to open for writing (No such file or directory):
/usr/local/examples/step-1/CMakeFiles/CMakeError.log
Call Stack (most recent call first):
/usr/share/cmake-3.16/Modules/CMakeDetermineCompilerId.cmake:60
(CMAKE_DETERMINE_COMPILER_ID_VENDOR)
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:111
(CMAKE_DETERMINE_COMPILER_ID)
CMakeLists.txt:38 (PROJECT)
-- The CXX compiler identification is unknown
CMake Error: Could not open file for write in copy operation
/usr/local/examples/step-1/CMakeFiles/3.16.3/CMakeCXXCompiler.cmake.tmp
CMake Error: : System Error: No such file or directory
CMake Error at
/usr/share/cmake-3.16/Modules/CMakeDetermineCXXCompiler.cmake:210
(configure_file):
configure_file Problem configuring file
Call Stack (most recent call first):
CMakeLists.txt:38 (PROJECT)
CMake Error: Could not find cmake module file:
/usr/local/examples/step-1/CMakeFiles/3.16.3/CMakeCXXCompiler.cmake
-- Check for working C compiler: /usr/bin/cc
CMake Error at /usr/share/cmake-3.16/Modules/CMakeTestCCompiler.cmake:32
(file):
file failed to open for writing (No such file or directory):
/usr/local/examples/step-1/CMakeFiles/CMakeTmp/testCCompiler.c
Call Stack (most recent call first):
CMakeLists.txt:38 (PROJECT)
CMake Error at /usr/share/cmake-3.16/Modules/CMakeTestCCompiler.cmake:44
(try_compile):
Unknown extension ".c" for file
/usr/local/examples/step-1/CMakeFiles/CMakeTmp/testCCompiler.c
try_compile() works only for enabled languages. Currently these are:
C CXX
See project() command to enable other languages.
Call Stack (most recent call first):
CMakeLists.txt:38 (PROJECT)
-- Check for working C compiler: /usr/bin/cc -- broken
CMake Error at /usr/share/cmake-3.16/Modules/CMakeTestCCompiler.cmake:56
(file):
file failed to open for writing (No such file or directory):
/usr/local/examples/step-1/CMakeFiles/CMakeError.log
Call Stack (most recent call first):
CMakeLists.txt:38 (PROJECT)
CMake Error at /usr/share/cmake-3.16/Modules/CMakeTestCCompiler.cmake:60
(message):
The C compiler
"/usr/bin/cc"
is not able to compile a simple test program.
It fails with the following output:
CMake will not be able to correctly generate this project.
Call Stack (most recent call first):
CMakeLists.txt:38 (PROJECT)
-- Configuring incomplete, errors occurred!
CMake Error: Cannot open file for write:
/usr/local/examples/step-1/CMakeCache.txt.tmp
CMake Error: : System Error: Permission denied
CMake Error: Unable to open cache file for save.
/usr/local/examples/step-1/CMakeCache.txt
CMake Error: : System Error: Permission denied
dealii@692261f3d221:/usr/local/examples/step-1$
--
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