Hello,
I am trying to install exadg, but it fails with the following error.
/home/anachronism/computation/exadg/include/exadg/grid/grid_utilities.h:121:48:
error: ‘class dealii::CellAccessor<3, 3>’ has no member named
‘as_dof_handler_iterator’
121 | face_pair_dof_hander.cell[0] =
it.cell[0]->as_dof_handler_iterator(dof_handler);
|
~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/home/anachronism/computation/exadg/include/exadg/grid/grid_utilities.h:122:48:
error: ‘class dealii::CellAccessor<3, 3>’ has no member named
‘as_dof_handler_iterator’
122 | face_pair_dof_hander.cell[1] =
it.cell[1]->as_dof_handler_iterator(dof_handler);
I am configuring exadg using
cmake .. -DDEAL_II_DIR=~/computation/deal.II -DBUILD_SHARED_LIBS=ON
-DPICKUP_TESTS=ON
How can I solve this issue and proceed further? dealii detailed log file
and exadg cmake cache files are attached. Please let me know in case any
additional information is required.
Thank you
Sooraj
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PERL_EXECUTABLE-ADVANCED:INTERNAL=1
//linker supports push/pop state
_CMAKE_LINKER_PUSHPOP_STATE_SUPPORTED:INTERNAL=TRUE
###
#
# deal.II configuration:
# CMAKE_BUILD_TYPE: DebugRelease
# BUILD_SHARED_LIBS: ON
# CMAKE_INSTALL_PREFIX: /home/anachronism/computation/deal.II
# CMAKE_SOURCE_DIR: /home/anachronism/Documents/packages/dealii/dealii-9.4.1
# (version 9.4.1)
# CMAKE_BINARY_DIR: /home/anachronism/Documents/packages/dealii/dealii-9.4.1
# CMAKE_CXX_COMPILER: GNU 11.3.0 on platform Linux x86_64
# /usr/bin/c++
# C++ language standard: C++17
# CMAKE_C_COMPILER: /usr/bin/cc
# CMAKE_Fortran_COMPILER: /usr/bin/gfortran
# CMAKE_GENERATOR: Unix Makefiles
#
# Base configuration (prior to feature configuration):
# DEAL_II_CXX_FLAGS: -pedantic -fPIC -Wall -Wextra -Wmissing-braces -Woverloaded-virtual -Wpointer-arith -Wsign-compare -Wsuggest-override -Wswitch -Wsynth -Wwrite-strings -Wno-placement-new -Wno-deprecated-declarations -Wno-literal-suffix -Wno-psabi -Wno-class-memaccess -fopenmp-simd
# DEAL_II_CXX_FLAGS_RELEASE: -O2 -funroll-loops -funroll-all-loops -fstrict-aliasing -Wno-unused-local-typedefs
# DEAL_II_CXX_FLAGS_DEBUG: -O0 -ggdb -Wa,--compress-debug-sections
# DEAL_II_LINKER_FLAGS: -rdynamic -fuse-ld=gold
# DEAL_II_LINKER_FLAGS_RELEASE:
# DEAL_II_LINKER_FLAGS_DEBUG: -ggdb
# DEAL_II_DEFINITIONS:
# DEAL_II_DEFINITIONS_RELEASE: NDEBUG
# DEAL_II_DEFINITIONS_DEBUG: DEBUG
# DEAL_II_USER_DEFINITIONS:
# DEAL_II_USER_DEFINITIONS_REL: NDEBUG
# DEAL_II_USER_DEFINITIONS_DEB: DEBUG
# DEAL_II_INCLUDE_DIRS
# DEAL_II_USER_INCLUDE_DIRS:
# DEAL_II_BUNDLED_INCLUDE_DIRS:
# DEAL_II_LIBRARIES:
# DEAL_II_LIBRARIES_RELEASE:
# DEAL_II_LIBRARIES_DEBUG:
# DEAL_II_VECTORIZATION_WIDTH_IN_BITS: 128
# DEAL_II_HAVE_CXX17
#
# Configured Features (DEAL_II_ALLOW_BUNDLED = ON, DEAL_II_ALLOW_AUTODETECTION = ON):
# ( DEAL_II_WITH_64BIT_INDICES = OFF )
# ( DEAL_II_WITH_ADOLC = OFF )
# ( DEAL_II_WITH_ARBORX = OFF )
# ( DEAL_II_WITH_ARPACK = OFF )
# ( DEAL_II_WITH_ASSIMP = OFF )
# DEAL_II_WITH_BOOST set up with external dependencies
# BOOST_VERSION = 1.74.0
# BOOST_CXX_FLAGS = -Wno-unused-local-typedefs
# BOOST_DEFINITIONS = BOOST_NO_AUTO_PTR
# BOOST_USER_DEFINITIONS = BOOST_NO_AUTO_PTR
# BOOST_INCLUDE_DIRS = /usr/include
# BOOST_USER_INCLUDE_DIRS = /usr/include
# BOOST_LIBRARIES = /usr/lib/x86_64-linux-gnu/libboost_iostreams.so;/usr/lib/x86_64-linux-gnu/libboost_serialization.so;/usr/lib/x86_64-linux-gnu/libboost_system.so;/usr/lib/x86_64-linux-gnu/libboost_thread.so;/usr/lib/x86_64-linux-gnu/libboost_regex.so;/usr/lib/x86_64-linux-gnu/libboost_chrono.so;/usr/lib/x86_64-linux-gnu/libboost_date_time.so;/usr/lib/x86_64-linux-gnu/libboost_atomic.so
# ( DEAL_II_WITH_CGAL = OFF )
# DEAL_II_WITH_COMPLEX_VALUES = ON
# ( DEAL_II_WITH_CUDA = OFF )
# ( DEAL_II_WITH_GINKGO = OFF )
# ( DEAL_II_WITH_GMSH = OFF )
# ( DEAL_II_WITH_GSL = OFF )
# ( DEAL_II_WITH_HDF5 = OFF )
# ( DEAL_II_WITH_KOKKOS = OFF )
# ( DEAL_II_WITH_LAPACK = OFF )
# ( DEAL_II_WITH_METIS = OFF )
# DEAL_II_WITH_MPI set up with external dependencies
# MPI_VERSION = 3.1
# MPI_C_COMPILER = /usr/bin/mpicc
# MPI_CXX_COMPILER = /usr/bin/mpicxx
# MPI_Fortran_COMPILER = /usr/bin/mpif90
# MPI_INCLUDE_DIRS = /usr/lib/x86_64-linux-gnu/openmpi/include;/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi
# MPI_USER_INCLUDE_DIRS = /usr/lib/x86_64-linux-gnu/openmpi/include;/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi
# MPI_LIBRARIES = /usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi_cxx.so;/usr/lib/x86_64-linux-gnu/libmpi_usempif08.so;/usr/lib/x86_64-linux-gnu/libmpi_usempi_ignore_tkr.so;/usr/lib/x86_64-linux-gnu/libmpi_mpifh.so;/usr/lib/x86_64-linux-gnu/libopen-rte.so;/usr/lib/x86_64-linux-gnu/libopen-pal.so;/usr/lib/x86_64-linux-gnu/libhwloc.so;/usr/lib/x86_64-linux-gnu/libevent_core.so;/usr/lib/x86_64-linux-gnu/libevent_pthreads.so;m;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so
# DEAL_II_WITH_MUPARSER set up with bundled packages
# MUPARSER_BUNDLED_INCLUDE_DIRS = /home/anachronism/Documents/packages/dealii/dealii-9.4.1/bundled/muparser_v2_3_3//include
# ( DEAL_II_WITH_OPENCASCADE = OFF )
# DEAL_II_WITH_P4EST set up with external dependencies
# P4EST_VERSION = 2.8.5.5-9ddbb
# P4EST_DIR = /home/anachronism/computation/p4est
# P4EST_INCLUDE_DIRS = /home/anachronism/computation/p4est/FAST/include
# P4EST_USER_INCLUDE_DIRS = /home/anachronism/computation/p4est/FAST/include
# P4EST_LIBRARIES = optimized;/home/anachronism/computation/p4est/FAST/lib/libp4est.so;/home/anachronism/computation/p4est/FAST/lib/libsc.so;debug;/home/anachronism/computation/p4est/DEBUG/lib/libp4est.so;/home/anachronism/computation/p4est/DEBUG/lib/libsc.so;general;/usr/lib/x86_64-linux-gnu/openmpi/lib/libmpi.so
# ( DEAL_II_WITH_PETSC = OFF )
# ( DEAL_II_WITH_SCALAPACK = OFF )
# ( DEAL_II_WITH_SLEPC = OFF )
# ( DEAL_II_WITH_SUNDIALS = OFF )
# ( DEAL_II_WITH_SYMENGINE = OFF )
# DEAL_II_WITH_TBB set up with bundled packages
# TBB_CXX_FLAGS = -Wno-parentheses
# TBB_BUNDLED_INCLUDE_DIRS = /home/anachronism/Documents/packages/dealii/dealii-9.4.1/bundled/tbb-2018_U2/include
# TBB_LIBRARIES = dl
# ( DEAL_II_WITH_TRILINOS = OFF )
# ( DEAL_II_WITH_UMFPACK = OFF )
# DEAL_II_WITH_ZLIB set up with external dependencies
# ZLIB_VERSION = 1.2.11
# ZLIB_INCLUDE_DIRS = /usr/include
# ZLIB_LIBRARIES = /usr/lib/x86_64-linux-gnu/libz.so
#
# Component configuration:
# ( DEAL_II_COMPONENT_DOCUMENTATION = OFF )
# DEAL_II_COMPONENT_EXAMPLES
# ( DEAL_II_COMPONENT_PACKAGE = OFF )
# ( DEAL_II_COMPONENT_PYTHON_BINDINGS = OFF )
#
###
