Great! That seems to have fixed the issue. I can run the code now, but I
get a run-time error (see below). I haven't changed anything in the
example, so I'm a little surprised to see an error. Is these something to
do with the new version?
T=0
Number of active cells: 1702
Number of degrees of freedom: 7288
NonLin Res Lin Iter Lin Res
_____________________________________
5.144e-02 0008 5.74e-13
4.356e-04 0008 1.18e-14
2.155e-07 0008 7.05e-18
2.494e-13 (converged)
--------------------------------------------------------
An error occurred in line <162> of file
</var/folders/s8/kkqmszv90s784nmqjb9xrxfw0000gp/T/rotundo/spack-stage/spack-stage-dealii-9.5.0-rjk5izx5wule74hcqwdxcko5v5fzanpw/spack-src/source/dofs/dof_accessor_set.cc>
in function
void dealii::internal::set_dof_values(const DoFCellAccessor<dim,
spacedim, lda> &, const Vector<number> &, OutputVector &, const bool) [dim
= 2, spacedim = 2, lda = false, OutputVector = dealii::Vector<double>,
number = double]
The violated condition was:
local_values_old[i] == number() || get_abs(local_values_old[i] -
local_values[i]) <= get_abs(local_values_old[i] + local_values[i]) *
100000. * std::numeric_limits<typename numbers::NumberTraits<
number>::real_type>::epsilon()
Additional information:
Called set_dof_values_by_interpolation(), but the element to be set,
value 0.003281728677182941, does not match with the non-zero value
0.001134142479970561 already set before.
Stacktrace:
-----------
#0 2 libdeal_II.g.9.5.0.dylib 0x000000011f294464
_ZN6dealii8internal14set_dof_valuesILi2ELi2ELb0ENS_6VectorIdEEdEEvRKNS_15DoFCellAccessorIXT_EXT0_EXT1_EEERKNS2_IT3_EERT2_b
+ 436: 2 libdeal_II.g.9.5.0.dylib 0x000000011f294464
_ZN6dealii8internal14set_dof_valuesILi2ELi2ELb0ENS_6VectorIdEEdEEvRKNS_15DoFCellAccessorIXT_EXT0_EXT1_EEERKNS2_IT3_EERT2_b
#1 3 libdeal_II.g.9.5.0.dylib 0x000000011f294238
_ZNSt3__110__function6__funcIZNK6dealii15DoFCellAccessorILi2ELi2ELb0EE31set_dof_values_by_interpolationINS2_6VectorIdEEdEEvRKNS6_IT0_EERT_tbEUlRKS4_RKS7_RS7_E_NS_9allocatorISJ_EEFvSF_SH_SI_EEclESF_SH_SI_
+ 32: 3 libdeal_II.g.9.5.0.dylib 0x000000011f294238
_ZNSt3__110__function6__funcIZNK6dealii15DoFCellAccessorILi2ELi2ELb0EE31set_dof_values_by_interpolationINS2_6VectorIdEEdEEvRKNS6_IT0_EERT_tbEUlRKS4_RKS7_RS7_E_NS_9allocatorISJ_EEFvSF_SH_SI_EEclESF_SH_SI_
#2 4 libdeal_II.g.9.5.0.dylib 0x000000011f19a040
_ZN6dealii8internal24process_by_interpolationILi2ELi2ELb0ENS_6VectorIdEEdEEvRKNS_15DoFCellAccessorIXT_EXT0_EXT1_EEERKNS2_IT3_EERT2_tRKNSt3__18functionIFvS7_SB_SD_EEE
+ 612: 4 libdeal_II.g.9.5.0.dylib 0x000000011f19a040
_ZN6dealii8internal24process_by_interpolationILi2ELi2ELb0ENS_6VectorIdEEdEEvRKNS_15DoFCellAccessorIXT_EXT0_EXT1_EEERKNS2_IT3_EERT2_tRKNSt3__18functionIFvS7_SB_SD_EEE
#3 5 libdeal_II.g.9.5.0.dylib 0x000000011f199d54
_ZNK6dealii15DoFCellAccessorILi2ELi2ELb0EE31set_dof_values_by_interpolationINS_6VectorIdEEdEEvRKNS3_IT0_EERT_tb
+ 68: 5 libdeal_II.g.9.5.0.dylib 0x000000011f199d54
_ZNK6dealii15DoFCellAccessorILi2ELi2ELb0EE31set_dof_values_by_interpolationINS_6VectorIdEEdEEvRKNS3_IT0_EERT_tb
#4 6 libdeal_II.g.9.5.0.dylib 0x000000011bb1ddf8
_ZNK6dealii16SolutionTransferILi2ENS_6VectorIdEELi2EE11interpolateERKNSt3__16vectorIS2_NS4_9allocatorIS2_EEEERS8_
+ 916: 6 libdeal_II.g.9.5.0.dylib 0x000000011bb1ddf8
_ZNK6dealii16SolutionTransferILi2ENS_6VectorIdEELi2EE11interpolateERKNSt3__16vectorIS2_NS4_9allocatorIS2_EEEERS8_
#5 7 step-33 0x00000001044bdce4
_ZN6Step3315ConservationLawILi2EE11refine_gridERKN6dealii6VectorIdEE + 904:
7 step-33 0x00000001044bdce4
_ZN6Step3315ConservationLawILi2EE11refine_gridERKN6dealii6VectorIdEE
#6 8 step-33 0x00000001044b4390
_ZN6Step3315ConservationLawILi2EE3runEv + 2072: 8 step-33
0x00000001044b4390 _ZN6Step3315ConservationLawILi2EE3runEv
#7 9 step-33 0x00000001044b38cc main + 116:
9 step-33 0x00000001044b38cc main
#8 10 dyld 0x0000000190763f28 start +
2236: 10 dyld 0x0000000190763f28 start
--------------------------------------------------------
Abort trap: 6
bash-3.2$
On Sunday, July 9, 2023 at 7:47:55 PM UTC-4 Matthias Maier wrote:
> Do you have an M1 or M2 CPU?
>
> If yes, would you mind trying out the shiny new venture arm64 dmg?
>
> https://github.com/dealii/dealii/releases
>
> Best,
> Matthias
>
>
>
> On Sun, Jul 9, 2023, at 18:41 CDT, "[email protected]" <
> [email protected]> wrote:
>
> > Hello,
> >
> > I've installed deal.ii on my macbook pro running macOS 13.4.1. I
> installed
> > deal.ii using the version 9.4.0 dmg file.
> >
> > I have been able to run cmake and make on step-33 but when I run make
> run I
> > get the following error:
> >
> > make[3]: *** [CMakeFiles/run] Illegal instruction: 4
> >
> > make[2]: *** [CMakeFiles/run.dir/all] Error 2
> >
> > make[1]: *** [CMakeFiles/run.dir/rule] Error 2
> >
> > Does anyone know what is going wrong?
> >
> > ~~~~~~~~~~~~~~~~
> >
> > Here is the full output:
> >
> > bash-3.2$ cmake ..
> >
> > -- Using the deal.II-9.4.0 installation found at
> > /Applications/deal.II.app/Contents/Resources/Libraries
> >
> > -- Include macro
> > /Applications/
> deal.II.app/Contents/Resources/Libraries/share/deal.II/macros/macro_deal_ii_add_test.cmake
> >
> > -- Include macro
> > /Applications/
> deal.II.app/Contents/Resources/Libraries/share/deal.II/macros/macro_deal_ii_initialize_cached_variables.cmake
> >
> > -- Include macro
> > /Applications/
> deal.II.app/Contents/Resources/Libraries/share/deal.II/macros/macro_deal_ii_invoke_autopilot.cmake
> >
> > -- Include macro
> > /Applications/
> deal.II.app/Contents/Resources/Libraries/share/deal.II/macros/macro_deal_ii_pickup_tests.cmake
> >
> > -- Include macro
> > /Applications/
> deal.II.app/Contents/Resources/Libraries/share/deal.II/macros/macro_deal_ii_query_git_information.cmake
> >
> > -- Include macro
> > /Applications/
> deal.II.app/Contents/Resources/Libraries/share/deal.II/macros/macro_deal_ii_setup_target.cmake
> >
> > -- The C compiler identification is AppleClang 14.0.3.14030022
> >
> > -- The CXX compiler identification is Clang 13.0.1
> >
> > -- Detecting C compiler ABI info
> >
> > -- Detecting C compiler ABI info - done
> >
> > -- Check for working C compiler:
> >
> /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc
>
>
> > - skipped
> >
> > -- Detecting C compile features
> >
> > -- Detecting C compile features - done
> >
> > -- Detecting CXX compiler ABI info
> >
> > -- Detecting CXX compiler ABI info - done
> >
> > -- Check for working CXX compiler:
> > /Applications/
> deal.II.app/Contents/Resources/spack/opt/spack/mpich-3.4.2-7776/bin/mpic++
> > - skipped
> >
> > -- Detecting CXX compile features
> >
> > -- Detecting CXX compile features - done
> >
> > -- Autopilot invoked
> >
> > ###
> >
> > #
> >
> > # Project step-33 set up with deal.II-9.4.0 found at
> >
> > # /Applications/deal.II.app/Contents/Resources/Libraries
> >
> > #
> >
> > # CMAKE_BUILD_TYPE: Debug
> >
> > #
> >
> > # You can now run
> >
> > # $ make - to compile and link the program
> >
> > # $ make run - to (compile, link and) run the program
> >
> > #
> >
> > # $ make sign - to sign the executable with the supplied
> > OSX developer key
> >
> > #
> >
> > # $ make debug - to switch the build type to 'Debug'
> >
> > # $ make release - to switch the build type to 'Release'
> >
> > #
> >
> > # $ make edit_cache - to change (cached) configuration variables
> >
> > # and rerun the configure and generate phases
> > of CMake
> >
> > #
> >
> > # $ make strip_comments - to strip the source files in this
> >
> > # directory off their comments; this is
> > irreversible
> >
> > # $ make clean - to remove the generated executable as well
> > as
> >
> > # all intermediate compilation files
> >
> > # $ make runclean - to remove all output generated by the
> > program
> >
> > # $ make distclean - to clean the directory from _all_ generated
> >
> > # files (includes clean, runclean and the
> > removal
> >
> > # of the generated build system)
> >
> > # $ make info - to view this message again
> >
> > #
> >
> > # Have a nice day!
> >
> > #
> >
> > ###
> >
> > -- Configuring done
> >
> > -- Generating done
> >
> > -- Build files have been written to:
> > /Users/andrewdavis/Documents/boltzmann/code/build
> >
> > bash-3.2$ make -j5
> >
> > [ 50%] Building CXX object CMakeFiles/step-33.dir/step-33.cc.o
> >
> > [100%] *Linking CXX executable step-33*
> >
> > [100%] Built target step-33
> >
> > bash-3.2$ make run
> >
> > *Consolidate compiler generated dependencies of target step-33*
> >
> > [ 66%] Built target step-33
> >
> > [100%] *Run step-33 with Debug configuration*
> >
> > make[3]: *** [CMakeFiles/run] Illegal instruction: 4
> >
> > make[2]: *** [CMakeFiles/run.dir/all] Error 2
> >
> > make[1]: *** [CMakeFiles/run.dir/rule] Error 2
> >
> > make: *** [run] Error 2
> >
> > bash-3.2$
>
--
The deal.II project is located at http://www.dealii.org/
For mailing list/forum options, see
https://groups.google.com/d/forum/dealii?hl=en
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