Thanks again! The using a newer version of Boost helped me get further and realize I made another bone headed mistake of compiling kokkos as a static library.
I am all compiled and passed all tests now. Thanks for your help and let me know if I have to do anything for this to be marked as solved. Best, Sean On Tuesday, February 6, 2024 at 8:30:19 AM UTC-7 bruno.t...@gmail.com wrote: > Sean, > > I am not sure what's the issue. It's probably not the issue but make sure > that mpi is using nvcc_wrapper as the underlying compiler. If you use > OpenMPI, you can use export `OMPI_CXX=nvcc_wrapper`. You could also try to > use a newer version of Boost. The bundled version is pretty old. Since you > are using Ubuntu 22.04, you can just use your package manager to install a > newer version of boost. > > Best, > > Bruno > > Le mar. 6 févr. 2024 à 09:37, Sean Johnson <sljoh...@gmail.com> a écrit : > >> Thanks, >> >> I tried lowering it down to 2 and it looks like two of them were caught a >> lot earlier. Now I don't make it past 6%. I erased everything from before >> and recompiled the cmake files and ran with just 2 jobs and again it stuck >> in the same spot. >> >> Here are the last few lines and logs. >> >> [ 6%] Building CXX object >> bundled/boost-1.70.0/libs/iostreams/src/CMakeFiles/bundled_boost_iostreams_debug.dir/gzip.cpp.o >> /home/sean/dealii-9.5.2/bundled/boost-1.70.0/libs/iostreams/src/../../../include/boost/mpl/assert.hpp:193:42: >> >> warning: unnecessary parentheses in declaration of ‘assert_arg’ >> [-Wparentheses] >> 193 | template< typename Pred > >> | ^ >> >> /home/sean/dealii-9.5.2/bundled/boost-1.70.0/libs/iostreams/src/../../../include/boost/mpl/assert.hpp:193:42: >> >> note: remove parentheses >> 193 | template< typename Pred > >> | ^ >> >> | - >> - >> /home/sean/dealii-9.5.2/bundled/boost-1.70.0/libs/iostreams/src/../../../include/boost/mpl/assert.hpp:198:42: >> >> warning: unnecessary parentheses in declaration of ‘assert_not_arg’ >> [-Wparentheses] >> 198 | template< typename Pred > >> | ^ >> >> >> /home/sean/dealii-9.5.2/bundled/boost-1.70.0/libs/iostreams/src/../../../include/boost/mpl/assert.hpp:198:42: >> >> note: remove parentheses >> 198 | template< typename Pred > >> | ^ >> >> >> | - >> >> - >> [ 6%] Building CXX object >> bundled/boost-1.70.0/libs/iostreams/src/CMakeFiles/bundled_boost_iostreams_debug.dir/mapped_file.cpp.o >> >> Thanks again for your patience and help, >> Sean >> >> On Monday, February 5, 2024 at 7:07:01 PM UTC-7 bruno.t...@gmail.com >> wrote: >> >>> Sean, >>> >>> It's possible that you don't have enough RAM and that you are swapping >>> memory which is extremely slow. Try to reinstall using fewer processors. >>> >>> Best, >>> >>> Bruno >>> >>> Le lun. 5 févr. 2024 à 19:01, Sean Johnson <sljoh...@gmail.com> a >>> écrit : >>> >>>> Thanks Bruno, >>>> >>>> This was definitely it. >>>> >>>> So I have now gotten to running make --jobs=4 install but it has frozen >>>> at 82% >>>> I have been sitting on it for about 6 to 7 hours with no change at all. >>>> The last line is: >>>> [ 82%] Built target object_non_matching_debug >>>> >>>> and attached are the summary.log and detailed.log >>>> >>>> I will keep it running still just incase but from previous >>>> installations of dealii this has never happened. >>>> >>>> Thanks, >>>> Sean >>>> >>>> On Monday, February 5, 2024 at 8:32:28 AM UTC-7 bruno.t...@gmail.com >>>> wrote: >>>> >>>>> Sean, >>>>> >>>>> It looks like you are using the wrong compiler. If you want to use >>>>> CUDA, you should use nvcc_wrapper as your C++ compiler. You want >>>>> something >>>>> like `-DCMAKE_CXX_COMPILER=/path/nvcc_wrapper`. You should already have >>>>> used `nvcc_wrapper` to compiler Kokkos. >>>>> >>>>> Best, >>>>> >>>>> Bruno >>>>> >>>>> On Monday, February 5, 2024 at 2:40:37 AM UTC-5 sljoh...@gmail.com >>>>> wrote: >>>>> >>>>>> Hey, >>>>>> >>>>>> I am trying to get deal.ii to compile with p4est and cuda. Due to >>>>>> cuda it also needs MPI and Kokkos from me. I can't even make the make >>>>>> file >>>>>> yet. I tried to find any similar problems in the mailing list and was >>>>>> unable to. >>>>>> >>>>>> I am running Ubuntu 22.04 >>>>>> >>>>>> The Error at the end reads: >>>>>> [ 50%] Building CXX object >>>>>> CMakeFiles/CheckCompilerSetupExec.dir/dummy.cpp.o >>>>>> /usr/bin/c++ -fopenmp-simd -O0 -ggdb -Wa,--compress-debug-sections >>>>>> -extended-lambda >>>>>> -Wext-lambda-captures-this -arch=sm_89 -DKOKKOS_DEPENDENCE >>>>>> -Wno-non-template-friend -o >>>>>> CMakeFiles/CheckCompilerSetupExec.dir/dummy.cpp.o -c >>>>>> /home/sean/dealii-9.5.2/cmake/macros/check_compiler_setup/dummy.cpp >>>>>> c++: error: unrecognized command-line option >>>>>> -Wext-lambda-captures-this >>>>>> c++: error: unrecognized command-line option -arch=sm_89 >>>>>> gmake[2]: *** [CMakeFiles/CheckCompilerSetupExec.dir/build.make:78: >>>>>> CMakeFiles/CheckCompilerSetupExec.dir/dummy.cpp.o] Error 1 >>>>>> gmake[2]: Leaving directory >>>>>> >>>>>> >>>>>> '/home/sean/dealii-9.5.2/build/check_compiler_setup/DEAL_II_HAVE_USABLE_FLAGS_DEBUG' >>>>>> gmake[1]: *** [CMakeFiles/Makefile2:86: >>>>>> CMakeFiles/CheckCompilerSetupExec.dir/all] Error 2 >>>>>> gmake[1]: Leaving directory >>>>>> >>>>>> >>>>>> '/home/sean/dealii-9.5.2/build/check_compiler_setup/DEAL_II_HAVE_USABLE_FLAGS_DEBUG' >>>>>> gmake: *** [Makefile:94: all] Error 2 >>>>>> >>>>>> >>>>>> CMake Error at cmake/setup_finalize.cmake:126 (message): >>>>>> >>>>>> >>>>>> Configuration error: Cannot compile a test program with the >>>>>> final set of >>>>>> compiler and linker flags: >>>>>> CXX flags (DEBUG): -fopenmp-simd -O0 -ggdb >>>>>> -Wa,--compress-debug-sections >>>>>> LD flags (DEBUG): -rdynamic -fopenmp -ggdb >>>>>> -Wl,--compress-debug-sections=zlib >>>>>> LIBRARIES (DEBUG): rt; >>>>>> >>>>>> Attached are the output and error logs. >>>>>> >>>>>> Thanks for any help, >>>>>> Sean >>>>>> >>>>>> -- >>>> The deal.II project is located at http://www.dealii.org/ >>>> For mailing list/forum options, see >>>> https://groups.google.com/d/forum/dealii?hl=en >>>> --- >>>> You received this message because you are subscribed to a topic in the >>>> Google Groups "deal.II User Group" group. >>>> To unsubscribe from this topic, visit >>>> https://groups.google.com/d/topic/dealii/l1tWck3YnHs/unsubscribe. >>>> To unsubscribe from this group and all its topics, send an email to >>>> dealii+un...@googlegroups.com. >>>> To view this discussion on the web visit >>>> https://groups.google.com/d/msgid/dealii/6ad27807-9f07-4a98-9a8b-c1fea625d13an%40googlegroups.com >>>> >>>> <https://groups.google.com/d/msgid/dealii/6ad27807-9f07-4a98-9a8b-c1fea625d13an%40googlegroups.com?utm_medium=email&utm_source=footer> >>>> . >>>> >>> -- >> The deal.II project is located at http://www.dealii.org/ >> For mailing list/forum options, see >> https://groups.google.com/d/forum/dealii?hl=en >> --- >> You received this message because you are subscribed to a topic in the >> Google Groups "deal.II User Group" group. >> To unsubscribe from this topic, visit >> https://groups.google.com/d/topic/dealii/l1tWck3YnHs/unsubscribe. >> To unsubscribe from this group and all its topics, send an email to >> dealii+un...@googlegroups.com. >> > To view this discussion on the web visit >> https://groups.google.com/d/msgid/dealii/539d86cb-8437-4b70-bd28-23c279e3dd5cn%40googlegroups.com >> >> <https://groups.google.com/d/msgid/dealii/539d86cb-8437-4b70-bd28-23c279e3dd5cn%40googlegroups.com?utm_medium=email&utm_source=footer> >> . >> > -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. 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