Your message dated Sun, 02 Mar 2008 23:17:07 +0000 with message-id <[EMAIL PROTECTED]> and subject line Bug#459116: fixed in openbabel 2.1.1-3 has caused the Debian Bug report #459116, regarding openbabel: FTBFS with dash: test cml failed to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [EMAIL PROTECTED] immediately.) -- 459116: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=459116 Debian Bug Tracking System Contact [EMAIL PROTECTED] with problems
--- Begin Message ---Package: openbabel version: 2.1.1-2 User: [EMAIL PROTECTED] Usertags: qa-ftbfs-dash-20080103 qa-ftbfs-dash Hi, During a rebuild of all packages in sid using /bin/dash as /bin/sh, your package failed to build. Relevant part: > make[4]: Entering directory `/build/user/openbabel-2.1.1/test' > aromatic......ok > atom..........ok > bond..........ok > cansmi........ok > conversion....============================== > *** Open Babel Warning in ReadMolecule > WARNING: Problems reading a MDL file > Cannot read title line > > ============================== > *** Open Babel Warning in ReadMolecule > WARNING: Problems reading a MDL file > Cannot read title line > > ok > data..........ok > format........ok > formula.......ok > formalcharge..ok > inchi.........ok > inchi2........ok > internalcoord.ok > iterators.....ok > invalidsmarts.ok > invalidsmiles.ok > logp_psa......ok > math..........ok > mol...........ok > residue.......ok > rings.........ok > smarts........ok > smilesmatch...ok > unitcell......ok > cml...........dubious > Test returned status 127 (wstat 32512, 0x7f00) > test-set......skipped > all skipped: - roundtrip test set not found. > Failed Test Stat Wstat Total Fail Failed List of Failed > ------------------------------------------------------------------------------- > cml.sh 127 32512 ?? ?? % ?? > 1 test skipped. > Failed 1/25 test scripts, 96.00% okay. 0/107582 subtests failed, 100.00% > okay. > FAIL: wrapper.sh > ======================================================== > 1 of 1 tests failed > Please report to [EMAIL PROTECTED] > ======================================================== > make[4]: *** [check-TESTS] Error 1 > make[4]: Leaving directory `/build/user/openbabel-2.1.1/test' > make[3]: *** [check-am] Error 2 > make[3]: Leaving directory `/build/user/openbabel-2.1.1/test' > make[2]: *** [check-recursive] Error 1 > make[2]: Leaving directory `/build/user/openbabel-2.1.1/test' > make[1]: *** [check-recursive] Error 1 > make[1]: Leaving directory `/build/user/openbabel-2.1.1' > make: *** [debian/stamp-makefile-check] Error 2 > dpkg-buildpackage: failure: debian/rules build gave error exit status 2 The full build log is available from: http://people.debian.org/~lucas/logs/2008/01/03.dash/ Rumors say that Ubuntu is using dash as /bin/sh on their buildds, so a patch might be available. Check <http://packages.qa.debian.org/openbabel>, or directly on launchpad: <https://launchpad.net/ubuntu/+source/openbabel>. A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! -- | Lucas Nussbaum | [EMAIL PROTECTED] http://www.lucas-nussbaum.net/ | | jabber: [EMAIL PROTECTED] GPG: 1024D/023B3F4F |
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--- Begin Message ---Source: openbabel Source-Version: 2.1.1-3 We believe that the bug you reported is fixed in the latest version of openbabel, which is due to be installed in the Debian FTP archive: libopenbabel-dev_2.1.1-3_i386.deb to pool/main/o/openbabel/libopenbabel-dev_2.1.1-3_i386.deb libopenbabel2_2.1.1-3_i386.deb to pool/main/o/openbabel/libopenbabel2_2.1.1-3_i386.deb openbabel_2.1.1-3.diff.gz to pool/main/o/openbabel/openbabel_2.1.1-3.diff.gz openbabel_2.1.1-3.dsc to pool/main/o/openbabel/openbabel_2.1.1-3.dsc openbabel_2.1.1-3_i386.deb to pool/main/o/openbabel/openbabel_2.1.1-3_i386.deb python-openbabel_2.1.1-3_i386.deb to pool/main/o/openbabel/python-openbabel_2.1.1-3_i386.deb A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [EMAIL PROTECTED], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Michael Banck <[EMAIL PROTECTED]> (supplier of updated openbabel package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [EMAIL PROTECTED]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Format: 1.7 Date: Sun, 02 Mar 2008 23:03:27 +0100 Source: openbabel Binary: python-openbabel libopenbabel-dev openbabel libopenbabel2 Architecture: i386 source Version: 2.1.1-3 Distribution: unstable Urgency: low Maintainer: Debichem Team <[EMAIL PROTECTED]> Changed-By: Michael Banck <[EMAIL PROTECTED]> Description: libopenbabel-dev - Convert and manipulate chemical data files (development version) libopenbabel2 - Convert and manipulate chemical data files openbabel - Convert and manipulate chemical data files python-openbabel - Convert and manipulate chemical data files (Python binding) Closes: 455170 459116 467498 Changes: openbabel (2.1.1-3) unstable; urgency=low . [ Michael Banck ] * debian/patches/testsuite_bashism.patch: New patch, use /bin/bash to run cml.sh instead of /bin/sh as "source" is a bashism. (Closes: #459116) . [ Daniel Leidert ] * debian/compat: Raised to level 5. * debian/control: Added DM-Upload-Allowed for DM status. (Uploaders): Added myself. (Build-Depends): Raised debhelper to v5. (Standards-Version): Update to 3.7.3 (no other changes). (Description): Typo fix (thanks to lintian). * debian/copyright: Updated. Added missing copyright informaton. Added missing information about libinchi. * debian/libopenbabel-dev.dirs: Removed (useless). * debian/libopenbabel-dev.install: Fixed plugins path (necessary for compatibility mode 5). * debian/openbabel.dirs: Ditto. * debian/openbabel.docs: Removed files that should go into all packages. Added READMEs regarding povray. * debian/openbabel.examples: Added example for the newly added READMEs. * debian/rules: Added DEB_INSTALL_DOCS_ALL for docs to install in all packages. Added DEB_INSTALL_MANPAGES_openbabel to install missing man-pages (retrieved from SVN). * debian/man/*.1: Added man-pages already in openbabels SVN but not shipped with the source. * debian/patches/fix_ftbfs_with_gcc_43.patch: Added. - Add missing includes to fix an FTBFS with GCC 4.3 (closes: #455170). * debian/patches/fix_467498_pedantic_issues.patch: Added. - Fix some issues -pedantic will complain about (LP: #195497; closes: #467498). Files: 1119549bcdb8e77e800ff51dcecf4736 1287228 python optional python-openbabel_2.1.1-3_i386.deb 1152a51a34d3c5863b66897dd692a54a 224858 science optional openbabel_2.1.1-3_i386.deb 4dc3e794e9714510c23d909ee9f68b49 14637442 libdevel optional libopenbabel-dev_2.1.1-3_i386.deb ae95b47824e4a6fda5646b15d42a0b0f 10502 science optional openbabel_2.1.1-3.diff.gz e3e5643ee45209480175627d06bc0280 2744444 libs optional libopenbabel2_2.1.1-3_i386.deb a82cf1f5ec52ad1e47e0307f14753cd1 998 science optional openbabel_2.1.1-3.dsc -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.2.1 (GNU/Linux) iD8DBQFHyzIxmHaJYZ7RAb8RAmXmAKCNZjDOjhzFxCAoKpxuxeNBpg4TCACcCFPg 464eEGnyURQ6ynicXrhMLt8= =TapY -----END PGP SIGNATURE-----
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