Your message dated Wed, 05 May 2010 17:32:32 +0000
with message-id <[email protected]>
and subject line Bug#570230: fixed in avogadro 1.0.1-1
has caused the Debian Bug report #570230,
regarding avogadro: Segmentation fault upon importing PDB data from a PDB code
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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--
570230: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=570230
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: avogadro
Version: 1.0.0-2
Severity: important
Greetings,
Avogadro crashes when importing (File->Import->Fetch from PDB) with
PDB code 3B75 (Crystal Structure of Glycated Human Haemoglobin
DOI:10.2210/pdb3b75/pdb).
The console only shows this:
QStackedLayout::setCurrentWidget: Widget 0x9e23de8 not contained in stack
libpng warning: Ignoring attempt to set cHRM RGB triangle with zero area
Segmentation fault (core dumped)
Thank you,
Filippo
-- System Information:
Debian Release: squeeze/sid
APT prefers testing
APT policy: (500, 'testing')
Architecture: i386 (i686)
Kernel: Linux 2.6.32-trunk-686 (SMP w/2 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Versions of packages avogadro depends on:
ii libavogadro1 1.0.0-2 Molecular Graphics and Modelling S
ii libc6 2.10.2-2 GNU C Library: Shared libraries
ii libgcc1 1:4.4.2-9 GCC support library
ii libgl1-mesa-glx [libgl1] 7.6.1-1 A free implementation of the OpenG
ii libopenbabel3 2.2.3-1+b1 Chemical toolbox library
ii libqt4-opengl 4:4.5.3-4 Qt 4 OpenGL module
ii libqtcore4 4:4.5.3-4 Qt 4 core module
ii libqtgui4 4:4.5.3-4 Qt 4 GUI module
ii libstdc++6 4.4.2-9 The GNU Standard C++ Library v3
ii libx11-6 2:1.3.3-1 X11 client-side library
Versions of packages avogadro recommends:
ii avogadro-data 1.0.0-2 Molecular Graphics and Modelling S
avogadro suggests no packages.
-- no debconf information
--- End Message ---
--- Begin Message ---
Source: avogadro
Source-Version: 1.0.1-1
We believe that the bug you reported is fixed in the latest version of
avogadro, which is due to be installed in the Debian FTP archive:
avogadro-data_1.0.1-1_all.deb
to main/a/avogadro/avogadro-data_1.0.1-1_all.deb
avogadro_1.0.1-1.diff.gz
to main/a/avogadro/avogadro_1.0.1-1.diff.gz
avogadro_1.0.1-1.dsc
to main/a/avogadro/avogadro_1.0.1-1.dsc
avogadro_1.0.1-1_i386.deb
to main/a/avogadro/avogadro_1.0.1-1_i386.deb
avogadro_1.0.1.orig.tar.gz
to main/a/avogadro/avogadro_1.0.1.orig.tar.gz
libavogadro-dev_1.0.1-1_i386.deb
to main/a/avogadro/libavogadro-dev_1.0.1-1_i386.deb
libavogadro1_1.0.1-1_i386.deb
to main/a/avogadro/libavogadro1_1.0.1-1_i386.deb
python-avogadro_1.0.1-1_i386.deb
to main/a/avogadro/python-avogadro_1.0.1-1_i386.deb
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael Banck <[email protected]> (supplier of updated avogadro package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: RIPEMD160
Format: 1.8
Date: Wed, 05 May 2010 17:57:59 +0200
Source: avogadro
Binary: avogadro avogadro-data libavogadro1 libavogadro-dev python-avogadro
Architecture: source all i386
Version: 1.0.1-1
Distribution: unstable
Urgency: low
Maintainer: Debichem Team <[email protected]>
Changed-By: Michael Banck <[email protected]>
Description:
avogadro - Molecular Graphics and Modelling System
avogadro-data - Molecular Graphics and Modelling System (Data Files)
libavogadro-dev - Molecular Graphics and Modelling System (development files)
libavogadro1 - Molecular Graphics and Modelling System (library)
python-avogadro - Molecular Graphics and Modelling System (Python module)
Closes: 570230
Changes:
avogadro (1.0.1-1) unstable; urgency=low
.
* New upstream release.
+ Fixes crash when importing PDB files via network (Closes: #570230).
* debian/patches/sip_4.10_support.patch: Removed, applied upstream.
* debian/control (Build-Depends): Bump required libqt4-dev version to
4.5.0, as per CMakeLists.txt.
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avogadro_1.0.1-1_i386.deb
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libavogadro-dev_1.0.1-1_i386.deb
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