Your message dated Fri, 01 Jul 2011 16:33:27 +0000
with message-id <[email protected]>
and subject line Bug#632165: fixed in v-sim 3.6.0-2
has caused the Debian Bug report #632165,
regarding v-sim-plugins and v-sim-doc: error when trying to install together
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
632165: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=632165
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: v-sim-doc,v-sim-plugins
Version: v-sim-doc/3.6.0-1
Version: v-sim-plugins/3.6.0-1
Severity: serious
User: [email protected]
Usertags: edos-file-overwrite
Date: 2011-06-30
Architecture: amd64
Distribution: sid
Hi,
automatic installation tests of packages that share a file and at the
same time do not conflict by their package dependency relationships has
detected the following problem:
WARNING: The following packages cannot be authenticated!
multiarch-support gcc-4.6-base libgcc1 libstdc++6 libgpg-error0 libgcrypt11
libkeyutils1 libtasn1-3 libavahi-common-data libavahi-common3 libdbus-1-3
libavahi-client3 libgnutls26 libkrb5support0 libk5crypto3 libkrb5-3
libgssapi-krb5-2 libcups2 libidn11 libsasl2-2 libldap-2.4-2 librtmp0 openssl
ca-certificates libcurl3-gnutls libdatrie1 libdrm2 libffi5 libexpat1
libfreetype6 ucf ttf-dejavu-core fontconfig-config libfontconfig1
libquadmath0 libgfortran3 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6
libxfixes3 libxdamage1 libxext6 libxxf86vm1 libgl1-mesa-glx libglu1-mesa
libthai-data libthai0 libxcb-render0 libxcb-shm0 libxcomposite1 libxrender1
libxcursor1 libxft2 libxi6 libxinerama1 libxrandr2 libdb4.8 libpcre3 libxml2
mime-support python2.6-minimal python2.6 fontconfig libglib2.0-0
libgirepository-1.0-1 gir1.2-glib-2.0 libatk1.0-data libatk1.0-0
gir1.2-atk-1.0 libpixman-1-0 libpng12-0 libcairo2 libcairo-gobject2
gir1.2-freedesktop libjpeg62 libjasper1 libtiff4 libgdk-pixbuf2.0-0
gir1.2-gdkpixbuf-2.0 libgtk2.0-common libpango1.0-0 gir1.2-pango-1.0
shared-mime-info libgtk2.0-0 gir1.2-gtk-2.0 gir1.2-v-sim-1.0
libhdf5-serial-1.8.4 libnetcdf6 libopenbabel4 libpython2.6 v-sim-common
v-sim v-sim-doc v-sim-plugins
Extracting templates from packages: 31%
Extracting templates from packages: 62%
Extracting templates from packages: 93%
Extracting templates from packages: 100%
Preconfiguring packages ...
Authentication warning overridden.
Can not write log, openpty() failed (/dev/pts not mounted?)
Selecting previously deselected package multiarch-support.
(Reading database ... 9216 files and directories currently installed.)
Unpacking multiarch-support (from .../multiarch-support_2.13-7_amd64.deb) ...
Can not write log, openpty() failed (/dev/pts not mounted?)
Setting up multiarch-support (2.13-7) ...
Can not write log, openpty() failed (/dev/pts not mounted?)
(Reading database ... 9220 files and directories currently installed.)
Preparing to replace gcc-4.6-base 4.6.0-11 (using
.../gcc-4.6-base_4.6.1-1_amd64.deb) ...
Unpacking replacement gcc-4.6-base ...
Can not write log, openpty() failed (/dev/pts not mounted?)
Setting up gcc-4.6-base (4.6.1-1) ...
Can not write log, openpty() failed (/dev/pts not mounted?)
(Reading database ... 9218 files and directories currently installed.)
Preparing to replace libgcc1 1:4.6.0-11 (using
.../libgcc1_1%3a4.6.1-1_amd64.deb) ...
Unpacking replacement libgcc1 ...
Can not write log, openpty() failed (/dev/pts not mounted?)
Setting up libgcc1 (1:4.6.1-1) ...
Can not write log, openpty() failed (/dev/pts not mounted?)
(Reading database ... 9218 files and directories currently installed.)
Preparing to replace libstdc++6 4.6.0-11 (using
.../libstdc++6_4.6.1-1_amd64.deb) ...
Unpacking replacement libstdc++6 ...
Can not write log, openpty() failed (/dev/pts not mounted?)
Setting up libstdc++6 (4.6.1-1) ...
Can not write log, openpty() failed (/dev/pts not mounted?)
Selecting previously deselected package libgpg-error0.
(Reading database ... 9218 files and directories currently installed.)
Unpacking libgpg-error0 (from .../libgpg-error0_1.10-0.3_amd64.deb) ...
Selecting previously deselected package libgcrypt11.
Unpacking libgcrypt11 (from .../libgcrypt11_1.4.6-7_amd64.deb) ...
Selecting previously deselected package libkeyutils1.
Unpacking libkeyutils1 (from .../libkeyutils1_1.4-5_amd64.deb) ...
Selecting previously deselected package libtasn1-3.
Unpacking libtasn1-3 (from .../libtasn1-3_2.9-4_amd64.deb) ...
Selecting previously deselected package libavahi-common-data.
Unpacking libavahi-common-data (from
.../libavahi-common-data_0.6.30-3_amd64.deb) ...
Selecting previously deselected package libavahi-common3.
Unpacking libavahi-common3 (from .../libavahi-common3_0.6.30-3_amd64.deb) ...
Selecting previously deselected package libdbus-1-3.
Unpacking libdbus-1-3 (from .../libdbus-1-3_1.4.12-2_amd64.deb) ...
Selecting previously deselected package libavahi-client3.
Unpacking libavahi-client3 (from .../libavahi-client3_0.6.30-3_amd64.deb) ...
Selecting previously deselected package libgnutls26.
Unpacking libgnutls26 (from .../libgnutls26_2.10.5-2_amd64.deb) ...
Selecting previously deselected package libkrb5support0.
Unpacking libkrb5support0 (from .../libkrb5support0_1.9.1+dfsg-1+b1_amd64.deb)
...
Selecting previously deselected package libk5crypto3.
Unpacking libk5crypto3 (from .../libk5crypto3_1.9.1+dfsg-1+b1_amd64.deb) ...
Selecting previously deselected package libkrb5-3.
Unpacking libkrb5-3 (from .../libkrb5-3_1.9.1+dfsg-1+b1_amd64.deb) ...
Selecting previously deselected package libgssapi-krb5-2.
Unpacking libgssapi-krb5-2 (from
.../libgssapi-krb5-2_1.9.1+dfsg-1+b1_amd64.deb) ...
Selecting previously deselected package libcups2.
Unpacking libcups2 (from .../libcups2_1.4.6-11_amd64.deb) ...
Selecting previously deselected package libidn11.
Unpacking libidn11 (from .../libidn11_1.22-1_amd64.deb) ...
Selecting previously deselected package libsasl2-2.
Unpacking libsasl2-2 (from
.../libsasl2-2_2.1.24~rc1.dfsg1+cvs2011-05-23-4_amd64.deb) ...
Selecting previously deselected package libldap-2.4-2.
Unpacking libldap-2.4-2 (from .../libldap-2.4-2_2.4.25-1.1_amd64.deb) ...
Selecting previously deselected package librtmp0.
Unpacking librtmp0 (from .../librtmp0_2.3-2_amd64.deb) ...
Selecting previously deselected package openssl.
Unpacking openssl (from .../openssl_1.0.0d-3_amd64.deb) ...
Selecting previously deselected package ca-certificates.
Unpacking ca-certificates (from .../ca-certificates_20110502_all.deb) ...
Selecting previously deselected package libcurl3-gnutls.
Unpacking libcurl3-gnutls (from .../libcurl3-gnutls_7.21.6-3_amd64.deb) ...
Selecting previously deselected package libdatrie1.
Unpacking libdatrie1 (from .../libdatrie1_0.2.4-3_amd64.deb) ...
Selecting previously deselected package libdrm2.
Unpacking libdrm2 (from .../libdrm2_2.4.26-1_amd64.deb) ...
Selecting previously deselected package libffi5.
Unpacking libffi5 (from .../libffi5_3.0.9-7_amd64.deb) ...
Selecting previously deselected package libexpat1.
Unpacking libexpat1 (from .../libexpat1_2.0.1-7_amd64.deb) ...
Selecting previously deselected package libfreetype6.
Unpacking libfreetype6 (from .../libfreetype6_2.4.4-2_amd64.deb) ...
Selecting previously deselected package ucf.
Unpacking ucf (from .../ucf_3.0025+nmu2_all.deb) ...
Moving old data out of the way
Selecting previously deselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-1_all.deb) ...
Selecting previously deselected package fontconfig-config.
Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3_all.deb) ...
Selecting previously deselected package libfontconfig1.
Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3_amd64.deb) ...
Selecting previously deselected package libquadmath0.
Unpacking libquadmath0 (from .../libquadmath0_4.6.1-1_amd64.deb) ...
Selecting previously deselected package libgfortran3.
Unpacking libgfortran3 (from .../libgfortran3_4.6.1-1_amd64.deb) ...
Selecting previously deselected package libxau6.
Unpacking libxau6 (from .../libxau6_1%3a1.0.6-3_amd64.deb) ...
Selecting previously deselected package libxdmcp6.
Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-3_amd64.deb) ...
Selecting previously deselected package libxcb1.
Unpacking libxcb1 (from .../libxcb1_1.7-3_amd64.deb) ...
Selecting previously deselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.3-2_all.deb) ...
Selecting previously deselected package libx11-6.
Unpacking libx11-6 (from .../libx11-6_2%3a1.4.3-2_amd64.deb) ...
Selecting previously deselected package libxfixes3.
Unpacking libxfixes3 (from .../libxfixes3_1%3a5.0-4_amd64.deb) ...
Selecting previously deselected package libxdamage1.
Unpacking libxdamage1 (from .../libxdamage1_1%3a1.1.3-2_amd64.deb) ...
Selecting previously deselected package libxext6.
Unpacking libxext6 (from .../libxext6_2%3a1.3.0-3_amd64.deb) ...
Selecting previously deselected package libxxf86vm1.
Unpacking libxxf86vm1 (from .../libxxf86vm1_1%3a1.1.1-2_amd64.deb) ...
Selecting previously deselected package libgl1-mesa-glx.
Unpacking libgl1-mesa-glx (from .../libgl1-mesa-glx_7.10.3-3_amd64.deb) ...
Selecting previously deselected package libglu1-mesa.
Unpacking libglu1-mesa (from .../libglu1-mesa_7.10.3-3_amd64.deb) ...
Selecting previously deselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.15-2_all.deb) ...
Selecting previously deselected package libthai0.
Unpacking libthai0 (from .../libthai0_0.1.15-2_amd64.deb) ...
Selecting previously deselected package libxcb-render0.
Unpacking libxcb-render0 (from .../libxcb-render0_1.7-3_amd64.deb) ...
Selecting previously deselected package libxcb-shm0.
Unpacking libxcb-shm0 (from .../libxcb-shm0_1.7-3_amd64.deb) ...
Selecting previously deselected package libxcomposite1.
Unpacking libxcomposite1 (from .../libxcomposite1_1%3a0.4.3-2_amd64.deb) ...
Selecting previously deselected package libxrender1.
Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_amd64.deb) ...
Selecting previously deselected package libxcursor1.
Unpacking libxcursor1 (from .../libxcursor1_1%3a1.1.11-3_amd64.deb) ...
Selecting previously deselected package libxft2.
Unpacking libxft2 (from .../libxft2_2.2.0-3_amd64.deb) ...
Selecting previously deselected package libxi6.
Unpacking libxi6 (from .../libxi6_2%3a1.4.3-3_amd64.deb) ...
Selecting previously deselected package libxinerama1.
Unpacking libxinerama1 (from .../libxinerama1_2%3a1.1.1-3_amd64.deb) ...
Selecting previously deselected package libxrandr2.
Unpacking libxrandr2 (from .../libxrandr2_2%3a1.3.1-2_amd64.deb) ...
Selecting previously deselected package libdb4.8.
Unpacking libdb4.8 (from .../libdb4.8_4.8.30-9_amd64.deb) ...
Selecting previously deselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_8.12-3_amd64.deb) ...
Selecting previously deselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-3_amd64.deb) ...
Selecting previously deselected package mime-support.
Unpacking mime-support (from .../mime-support_3.51-1_all.deb) ...
Selecting previously deselected package python2.6-minimal.
Unpacking python2.6-minimal (from .../python2.6-minimal_2.6.7-2_amd64.deb) ...
Selecting previously deselected package python2.6.
Unpacking python2.6 (from .../python2.6_2.6.7-2_amd64.deb) ...
Selecting previously deselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-3_amd64.deb) ...
Selecting previously deselected package libglib2.0-0.
Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_amd64.deb) ...
Selecting previously deselected package libgirepository-1.0-1.
Unpacking libgirepository-1.0-1 (from
.../libgirepository-1.0-1_0.10.8-2_amd64.deb) ...
Selecting previously deselected package gir1.2-glib-2.0.
Unpacking gir1.2-glib-2.0 (from .../gir1.2-glib-2.0_0.10.8-2_amd64.deb) ...
Selecting previously deselected package libatk1.0-data.
Unpacking libatk1.0-data (from .../libatk1.0-data_2.0.1-1_all.deb) ...
Selecting previously deselected package libatk1.0-0.
Unpacking libatk1.0-0 (from .../libatk1.0-0_2.0.1-1_amd64.deb) ...
Selecting previously deselected package gir1.2-atk-1.0.
Unpacking gir1.2-atk-1.0 (from .../gir1.2-atk-1.0_2.0.1-1_amd64.deb) ...
Selecting previously deselected package libpixman-1-0.
Unpacking libpixman-1-0 (from .../libpixman-1-0_0.21.8-1_amd64.deb) ...
Selecting previously deselected package libpng12-0.
Unpacking libpng12-0 (from .../libpng12-0_1.2.44-2_amd64.deb) ...
Selecting previously deselected package libcairo2.
Unpacking libcairo2 (from .../libcairo2_1.10.2-6_amd64.deb) ...
Selecting previously deselected package libcairo-gobject2.
Unpacking libcairo-gobject2 (from .../libcairo-gobject2_1.10.2-6_amd64.deb) ...
Selecting previously deselected package gir1.2-freedesktop.
Unpacking gir1.2-freedesktop (from .../gir1.2-freedesktop_0.10.8-2_amd64.deb)
...
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Selecting previously deselected package libjasper1.
Unpacking libjasper1 (from .../libjasper1_1.900.1-7+b1_amd64.deb) ...
Selecting previously deselected package libtiff4.
Unpacking libtiff4 (from .../libtiff4_3.9.5-1_amd64.deb) ...
Selecting previously deselected package libgdk-pixbuf2.0-0.
Unpacking libgdk-pixbuf2.0-0 (from .../libgdk-pixbuf2.0-0_2.23.3-3.1_amd64.deb)
...
Selecting previously deselected package gir1.2-gdkpixbuf-2.0.
Unpacking gir1.2-gdkpixbuf-2.0 (from
.../gir1.2-gdkpixbuf-2.0_2.23.3-3.1_amd64.deb) ...
Selecting previously deselected package libgtk2.0-common.
Unpacking libgtk2.0-common (from .../libgtk2.0-common_2.24.4-3_all.deb) ...
Selecting previously deselected package libpango1.0-0.
Unpacking libpango1.0-0 (from .../libpango1.0-0_1.28.4-1_amd64.deb) ...
Selecting previously deselected package gir1.2-pango-1.0.
Unpacking gir1.2-pango-1.0 (from .../gir1.2-pango-1.0_1.28.4-1_amd64.deb) ...
Selecting previously deselected package shared-mime-info.
Unpacking shared-mime-info (from .../shared-mime-info_0.90-1_amd64.deb) ...
Selecting previously deselected package libgtk2.0-0.
Unpacking libgtk2.0-0 (from .../libgtk2.0-0_2.24.4-3_amd64.deb) ...
Selecting previously deselected package gir1.2-gtk-2.0.
Unpacking gir1.2-gtk-2.0 (from .../gir1.2-gtk-2.0_2.24.4-3_amd64.deb) ...
Selecting previously deselected package gir1.2-v-sim-1.0.
Unpacking gir1.2-v-sim-1.0 (from .../gir1.2-v-sim-1.0_3.6.0-1_amd64.deb) ...
Selecting previously deselected package libhdf5-serial-1.8.4.
Unpacking libhdf5-serial-1.8.4 (from
.../libhdf5-serial-1.8.4_1.8.4-patch1-2_amd64.deb) ...
Selecting previously deselected package libnetcdf6.
Unpacking libnetcdf6 (from .../libnetcdf6_1%3a4.1.1-5_amd64.deb) ...
Selecting previously deselected package libopenbabel4.
Unpacking libopenbabel4 (from .../libopenbabel4_2.3.0+dfsg-1_amd64.deb) ...
Selecting previously deselected package libpython2.6.
Unpacking libpython2.6 (from .../libpython2.6_2.6.7-2_amd64.deb) ...
Selecting previously deselected package v-sim-common.
Unpacking v-sim-common (from .../v-sim-common_3.6.0-1_all.deb) ...
Selecting previously deselected package v-sim.
Unpacking v-sim (from .../v-sim_3.6.0-1_amd64.deb) ...
Selecting previously deselected package v-sim-doc.
Unpacking v-sim-doc (from .../v-sim-doc_3.6.0-1_all.deb) ...
Selecting previously deselected package v-sim-plugins.
Unpacking v-sim-plugins (from .../v-sim-plugins_3.6.0-1_amd64.deb) ...
dpkg: error processing /var/cache/apt/archives/v-sim-plugins_3.6.0-1_amd64.deb
(--unpack):
trying to overwrite '/usr/share/doc/v-sim-doc/examples/collisions.ascii.gz',
which is also in package v-sim-doc 3.6.0-1
configured to not write apport reports
dpkg-deb: error: subprocess paste was killed by signal (Broken pipe)
Processing triggers for man-db ...
Errors were encountered while processing:
/var/cache/apt/archives/v-sim-plugins_3.6.0-1_amd64.deb
E: Sub-process /usr/bin/dpkg returned an error code (1)
This is a serious bug as it makes installation fail, and violates
sections 7.6.1 and 10.1 of the policy. An optimal solution would
consist in only one of the packages installing that file, and renaming
or removing the file in the other package. Depending on the
circumstances you might also consider Replace relations or file
diversions. If the conflicting situation cannot be resolved then, as a
last resort, the two packages have to declare a mutual
Conflict. Please take into account that Replaces, Conflicts and
diversions should only be used when packages provide different
implementations for the same functionality.
Here is a list of files that are known to be shared by both packages
(according to the Contents file for sid/amd64, which may be
slightly out of sync):
/usr/share/doc/v-sim-doc/examples/collisions.ascii.gz
This bug is assigned to both packages. If you, the maintainers of
the two packages in question, have agreed on which of the packages will
resolve the problem please reassign the bug to that package. You may
also register in the BTS that the other package is affected by the bug.
-Ralf.
PS: for more information about the detection of file overwrite errors
of this kind see http://edos.debian.net/file-overwrites/.
--- End Message ---
--- Begin Message ---
Source: v-sim
Source-Version: 3.6.0-2
We believe that the bug you reported is fixed in the latest version of
v-sim, which is due to be installed in the Debian FTP archive:
gir1.2-v-sim-1.0_3.6.0-2_amd64.deb
to main/v/v-sim/gir1.2-v-sim-1.0_3.6.0-2_amd64.deb
v-sim-common_3.6.0-2_all.deb
to main/v/v-sim/v-sim-common_3.6.0-2_all.deb
v-sim-doc_3.6.0-2_all.deb
to main/v/v-sim/v-sim-doc_3.6.0-2_all.deb
v-sim-plugins_3.6.0-2_amd64.deb
to main/v/v-sim/v-sim-plugins_3.6.0-2_amd64.deb
v-sim_3.6.0-2.debian.tar.gz
to main/v/v-sim/v-sim_3.6.0-2.debian.tar.gz
v-sim_3.6.0-2.dsc
to main/v/v-sim/v-sim_3.6.0-2.dsc
v-sim_3.6.0-2_amd64.deb
to main/v/v-sim/v-sim_3.6.0-2_amd64.deb
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Damien Caliste <[email protected]> (supplier of updated v-sim package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Fri, 01 Jul 2011 10:31:34 +0200
Source: v-sim
Binary: v-sim v-sim-common gir1.2-v-sim-1.0 v-sim-doc v-sim-plugins
Architecture: source all amd64
Version: 3.6.0-2
Distribution: unstable
Urgency: low
Maintainer: Debian Science Team
<[email protected]>
Changed-By: Damien Caliste <[email protected]>
Description:
gir1.2-v-sim-1.0 - Visualize atomic structures (gir bindings)
v-sim - Visualize atomic structures
v-sim-common - Visualize atomic structures (support files)
v-sim-doc - Visualize atomic structures (example files)
v-sim-plugins - Plugins for V_Sim (a 3D visualization package)
Closes: 632165
Changes:
v-sim (3.6.0-2) unstable; urgency=low
.
* Closes: #632165, remove collision.ascii file from v-sim-doc.
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v-sim_3.6.0-2.debian.tar.gz
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v-sim-common_3.6.0-2_all.deb
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v-sim_3.6.0-2_amd64.deb
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gir1.2-v-sim-1.0_3.6.0-2_amd64.deb
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v-sim-plugins_3.6.0-2_amd64.deb
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