Your message dated Thu, 26 Jan 2012 19:47:41 +0000
with message-id <[email protected]>
and subject line Bug#656189: fixed in petsc 3.2.dfsg-4
has caused the Debian Bug report #656189,
regarding petsc: Please disable hcp of the mpicc implementation
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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misconfiguration somewhere. Please contact [email protected]
immediately.)
--
656189: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=656189
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: petsc
Severity: important
Tags: patch
Hello,
It would be nice if you could apply the attached patch.
It disables the search of mpicc as hcp.
For an unclear reason, it fixes the bug #624671.
slepc fails to build under sparc if hcp is used (while mpiCC will work).
Thanks
S
-- System Information:
Debian Release: wheezy/sid
APT prefers testing
APT policy: (600, 'testing'), (500, 'unstable'), (500, 'stable'), (1,
'experimental')
Architecture: i386 (i686)
Kernel: Linux 3.1.0-1-686-pae (SMP w/4 CPU cores)
Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash
Index: petsc-3.2.dfsg/config/BuildSystem/config/setCompilers.py
===================================================================
--- petsc-3.2.dfsg.orig/config/BuildSystem/config/setCompilers.py 2012-01-17 11:54:09.000000000 +0100
+++ petsc-3.2.dfsg/config/BuildSystem/config/setCompilers.py 2012-01-17 12:00:19.000000000 +0100
@@ -647,12 +647,11 @@
elif self.useMPICompilers() and 'with-mpi-dir' in self.argDB and os.path.isdir(os.path.join(self.argDB['with-mpi-dir'], 'bin')):
self.usedMPICompilers = 1
yield os.path.join(self.framework.argDB['with-mpi-dir'], 'bin', 'mpicxx')
- yield os.path.join(self.framework.argDB['with-mpi-dir'], 'bin', 'hcp')
yield os.path.join(self.framework.argDB['with-mpi-dir'], 'bin', 'mpic++')
yield os.path.join(self.framework.argDB['with-mpi-dir'], 'bin', 'mpiCC')
yield os.path.join(self.framework.argDB['with-mpi-dir'], 'bin', 'mpCC_r')
self.usedMPICompilers = 0
- raise RuntimeError('bin/<mpiCC,mpicxx,hcp,mpCC_r> you provided with -with-mpi-dir='+self.framework.argDB['with-mpi-dir']+' does not work')
+ raise RuntimeError('bin/<mpiCC,mpicxx,mpCC_r> you provided with -with-mpi-dir='+self.framework.argDB['with-mpi-dir']+' does not work')
else:
if self.useMPICompilers():
self.usedMPICompilers = 1
Index: petsc-3.2.dfsg/config/BuildSystem/config/setCompilers.py
===================================================================
--- petsc-3.2.dfsg.orig/config/BuildSystem/config/setCompilers.py 2012-01-17 11:54:09.000000000 +0100
+++ petsc-3.2.dfsg/config/BuildSystem/config/setCompilers.py 2012-01-17 12:00:19.000000000 +0100
@@ -647,12 +647,11 @@
elif self.useMPICompilers() and 'with-mpi-dir' in self.argDB and os.path.isdir(os.path.join(self.argDB['with-mpi-dir'], 'bin')):
self.usedMPICompilers = 1
yield os.path.join(self.framework.argDB['with-mpi-dir'], 'bin', 'mpicxx')
- yield os.path.join(self.framework.argDB['with-mpi-dir'], 'bin', 'hcp')
yield os.path.join(self.framework.argDB['with-mpi-dir'], 'bin', 'mpic++')
yield os.path.join(self.framework.argDB['with-mpi-dir'], 'bin', 'mpiCC')
yield os.path.join(self.framework.argDB['with-mpi-dir'], 'bin', 'mpCC_r')
self.usedMPICompilers = 0
- raise RuntimeError('bin/<mpiCC,mpicxx,hcp,mpCC_r> you provided with -with-mpi-dir='+self.framework.argDB['with-mpi-dir']+' does not work')
+ raise RuntimeError('bin/<mpiCC,mpicxx,mpCC_r> you provided with -with-mpi-dir='+self.framework.argDB['with-mpi-dir']+' does not work')
else:
if self.useMPICompilers():
self.usedMPICompilers = 1
--- End Message ---
--- Begin Message ---
Source: petsc
Source-Version: 3.2.dfsg-4
We believe that the bug you reported is fixed in the latest version of
petsc, which is due to be installed in the Debian FTP archive:
libpetsc3.2-dbg_3.2.dfsg-4_amd64.deb
to main/p/petsc/libpetsc3.2-dbg_3.2.dfsg-4_amd64.deb
libpetsc3.2-dev_3.2.dfsg-4_amd64.deb
to main/p/petsc/libpetsc3.2-dev_3.2.dfsg-4_amd64.deb
libpetsc3.2_3.2.dfsg-4_amd64.deb
to main/p/petsc/libpetsc3.2_3.2.dfsg-4_amd64.deb
petsc-dev_3.2.dfsg-4_all.deb
to main/p/petsc/petsc-dev_3.2.dfsg-4_all.deb
petsc3.2-doc_3.2.dfsg-4_all.deb
to main/p/petsc/petsc3.2-doc_3.2.dfsg-4_all.deb
petsc_3.2.dfsg-4.debian.tar.gz
to main/p/petsc/petsc_3.2.dfsg-4.debian.tar.gz
petsc_3.2.dfsg-4.dsc
to main/p/petsc/petsc_3.2.dfsg-4.dsc
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
"Adam C. Powell, IV" <[email protected]> (supplier of updated petsc package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Thu, 26 Jan 2012 14:10:51 -0500
Source: petsc
Binary: libpetsc3.2-dev petsc-dev libpetsc3.2 libpetsc3.2-dbg petsc3.2-doc
Architecture: source all amd64
Version: 3.2.dfsg-4
Distribution: unstable
Urgency: low
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: "Adam C. Powell, IV" <[email protected]>
Description:
libpetsc3.2 - Shared libraries for version 3.2 of PETSc
libpetsc3.2-dbg - Static debugging libraries for PETSc
libpetsc3.2-dev - Static libraries, shared links, header files for PETSc
petsc-dev - Virtual package depending on latest PETSc development package
petsc3.2-doc - Documentation and examples for PETSc
Closes: 642439 655940 656189
Changes:
petsc (3.2.dfsg-4) unstable; urgency=low
.
* Added lam4-dev to Build-Conflicts (closes: #656189).
* Added alpha and lpia to architecture list (closes: #655940).
* Added CHOLMOD support (closes: #642439).
* Test building with HDF5 on all arches.
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Checksums-Sha256:
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libpetsc3.2-dbg_3.2.dfsg-4_amd64.deb
Files:
85239c41bef0a1a6806af1a5cc878c0f 1998 devel extra petsc_3.2.dfsg-4.dsc
695d51361aa8edc468db995462e7e40b 33674 devel extra
petsc_3.2.dfsg-4.debian.tar.gz
af74ed798945eed493b2914686f90eea 15290 libdevel extra
petsc-dev_3.2.dfsg-4_all.deb
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petsc3.2-doc_3.2.dfsg-4_all.deb
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libpetsc3.2-dev_3.2.dfsg-4_amd64.deb
befbdf0937af86eddff968b6c27dcc4e 2766956 libs extra
libpetsc3.2_3.2.dfsg-4_amd64.deb
6860f924c728bf35ef80f42089a337e3 5825934 debug extra
libpetsc3.2-dbg_3.2.dfsg-4_amd64.deb
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--- End Message ---
