Your message dated Wed, 22 Feb 2012 15:33:37 +0000
with message-id <[email protected]>
and subject line Bug#659163: fixed in r-base 2.14.2~20120222-1
has caused the Debian Bug report #659163,
regarding r-base-dev: Please enable using ${R:depends} substvar in r-cran.mk
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
659163: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=659163
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: r-base-dev
Severity: wishlist
Tags: patch
Hi,
as discussed on the mailing list starting at
http://lists.debian.org/debian-med/2012/02/msg00074.html
I'm providing hereby the patch which would be quite helpful for all R
packages maintained by the Debian Med team and several of Debian Science
team.
Remark: The patch is totally non-invasive to any existing package. It
just appends the R version which was used to build the package to
debian/$(package).substvars. If you do not use ${R:Depends} in your
debian/control file the patch has no effect at all and I can not see
any chance to break any existing package. I have tested the patch
with one arch=all and one arch=any package.
Thanks for considering the patch
Andreas.
diff -ubrN r-base-2.14.1.orig/debian/r-cran.mk r-base-2.14.1/debian/r-cran.mk
--- r-base-2.14.1.orig/debian/r-cran.mk 2012-02-08 21:30:52.000000000 +0100
+++ r-base-2.14.1/debian/r-cran.mk 2012-02-08 21:23:23.000000000 +0100
@@ -61,6 +61,9 @@
## create the target directory
dh_installdirs $(debRdir)
##
+ ## create R:Depends substvar containing used R version
+ echo "R:Depends=r-base-core (>= $(shell R --version | head -n1
| perl -ne 'print / +([0-9]\.[0-9]+\.[0-9])/')~)" >> debian/$(package).substvars
+ ##
## call R to install the sources we're looking at
## use this inside xvfb-run if this wrapper is installed
if test -f /usr/bin/xvfb-run; then \
-- System Information:
Debian Release: 6.0.4
Architecture: i386 (i686)
Kernel: Linux 2.6.36-xenU-4814-i386 (SMP w/1 CPU core)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
--- End Message ---
--- Begin Message ---
Source: r-base
Source-Version: 2.14.2~20120222-1
We believe that the bug you reported is fixed in the latest version of
r-base, which is due to be installed in the Debian FTP archive:
r-base-core-dbg_2.14.2~20120222-1_i386.deb
to main/r/r-base/r-base-core-dbg_2.14.2~20120222-1_i386.deb
r-base-core_2.14.2~20120222-1_i386.deb
to main/r/r-base/r-base-core_2.14.2~20120222-1_i386.deb
r-base-dev_2.14.2~20120222-1_all.deb
to main/r/r-base/r-base-dev_2.14.2~20120222-1_all.deb
r-base-html_2.14.2~20120222-1_all.deb
to main/r/r-base/r-base-html_2.14.2~20120222-1_all.deb
r-base_2.14.2~20120222-1.diff.gz
to main/r/r-base/r-base_2.14.2~20120222-1.diff.gz
r-base_2.14.2~20120222-1.dsc
to main/r/r-base/r-base_2.14.2~20120222-1.dsc
r-base_2.14.2~20120222-1_all.deb
to main/r/r-base/r-base_2.14.2~20120222-1_all.deb
r-base_2.14.2~20120222.orig.tar.gz
to main/r/r-base/r-base_2.14.2~20120222.orig.tar.gz
r-doc-html_2.14.2~20120222-1_all.deb
to main/r/r-base/r-doc-html_2.14.2~20120222-1_all.deb
r-doc-info_2.14.2~20120222-1_all.deb
to main/r/r-base/r-doc-info_2.14.2~20120222-1_all.deb
r-doc-pdf_2.14.2~20120222-1_all.deb
to main/r/r-base/r-doc-pdf_2.14.2~20120222-1_all.deb
r-mathlib_2.14.2~20120222-1_i386.deb
to main/r/r-base/r-mathlib_2.14.2~20120222-1_i386.deb
r-recommended_2.14.2~20120222-1_all.deb
to main/r/r-base/r-recommended_2.14.2~20120222-1_all.deb
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Dirk Eddelbuettel <[email protected]> (supplier of updated r-base package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Wed, 22 Feb 2012 08:51:46 -0600
Source: r-base
Binary: r-base r-base-core r-base-dev r-mathlib r-base-html r-doc-pdf
r-doc-html r-doc-info r-recommended r-base-core-dbg
Architecture: source i386 all
Version: 2.14.2~20120222-1
Distribution: unstable
Urgency: low
Maintainer: Dirk Eddelbuettel <[email protected]>
Changed-By: Dirk Eddelbuettel <[email protected]>
Description:
r-base - GNU R statistical computation and graphics system
r-base-core - GNU R core of statistical computation and graphics system
r-base-core-dbg - GNU R debug symbols for statistical comp. language and
environmen
r-base-dev - GNU R installation of auxiliary GNU R packages
r-base-html - GNU R html docs for statistical computing system functions
r-doc-html - GNU R html manuals for statistical computing system
r-doc-info - GNU R info manuals statistical computing system
r-doc-pdf - GNU R pdf manuals for statistical computing system
r-mathlib - GNU R standalone mathematics library
r-recommended - GNU R collection of recommended packages [metapackage]
Closes: 652456 659163
Changes:
r-base (2.14.2~20120222-1) unstable; urgency=low
.
* Initial rc build (r58449) of R 2.14.2 expected for Feb 29
.
* R/m4, configure: Override bzip2 test for 1.0.6 to let our patched
1.0.5 version pass as lintian does not like the embedded library
.
* debian/r-cran.mk: Include simple-patchsys.mk only if quilt not used
as requested by Andreas Tille (Closes: #652456)
.
* debian/r-cran.mk: Support "R:Depends" expansion in debian/substvars
as requested by Andreas Tille and Charles Plessy (Closes: #659163)
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