Your message dated Wed, 12 Dec 2012 20:47:45 +0000
with message-id <[email protected]>
and subject line Bug#692499: fixed in arb 5.5-1
has caused the Debian Bug report #692499,
regarding arb: FTBFS on armhf [PATCH]
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
692499: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=692499
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:arb
Version: 5.3-4
Severity: important
Hi,
according to
https://buildd.debian.org/status/package.php?p=arb&suite=sid
arb fails to build from source on armhf (severity is not serious however
as the package was never built on armhf before). The patch to fix the
build failure is rather simple (attached).
Regards
Konstantinos
diff -ruN arb-5.3/ARBDB/adstring.c arb-5.3.mine/ARBDB/adstring.c
--- arb-5.3/ARBDB/adstring.c 2010-09-05 16:32:00.000000000 +0000
+++ arb-5.3.mine/ARBDB/adstring.c 2012-10-22 09:04:29.178734706 +0000
@@ -452,7 +452,8 @@
void GBS_reuse_buffer(GB_CSTR global_buffer) {
/* If you've just shortely used a buffer, you can put it back here */
- gbs_vglobal_string(global_buffer, 0, -1);
+ va_list empty;
+ gbs_vglobal_string(global_buffer, empty, -1);
}
GB_CSTR GBS_global_string(const char *templat, ...) {
diff -ruN arb-5.3/debian/rules arb-5.3.mine/debian/rules
--- arb-5.3/debian/rules 2012-07-27 13:25:59.000000000 +0000
+++ arb-5.3.mine/debian/rules 2012-11-06 19:41:52.157493413 +0000
@@ -27,11 +27,11 @@
export PATH=$(ARBHOME)/bin:$${PATH} ; \
export LD_LIBRARY_PATH=$(ARBHOME)/lib:$${LD_LIBRARY_PATH}; \
$(MAKE) DEBIAN=1 ARBHOME=$(ARBHOME) ARB_64=$(ARB_64) \
- CPPFLAGS="$(CPPFLAGS)" CFLAGS="$(CFLAGS)" CXXFLAGS="$(CXXFLAGS)" LDFLAGS="$(LDFLAGS)" \
+ CPPFLAGS="$(CPPFLAGS)" CFLAGS="$(CFLAGS)" CXXFLAGS="$(CXXFLAGS)" LDFLAGS="$(LDFLAGS) -lm" \
all ; \
export LD_LIBRARY_PATH=$(ARBHOME)/lib:$${LD_LIBRARY_PATH}; \
$(MAKE) DEBIAN=1 ARBHOME=$(ARBHOME) ARB_64=$(ARB_64) \
- CPPFLAGS="$(CPPFLAGS)" CFLAGS="$(CFLAGS)" CXXFLAGS="$(CXXFLAGS)" LDFLAGS="$(LDFLAGS)" \
+ CPPFLAGS="$(CPPFLAGS)" CFLAGS="$(CFLAGS)" CXXFLAGS="$(CXXFLAGS)" LDFLAGS="$(LDFLAGS) -lm" \
arbxtras
export LD_LIBRARY_PATH=$(ARBHOME)/lib:$${LD_LIBRARY_PATH}; \
cd HELP_SOURCE; $(MAKE) ARBHOME=$(ARBHOME) html
--- End Message ---
--- Begin Message ---
Source: arb
Source-Version: 5.5-1
We believe that the bug you reported is fixed in the latest version of
arb, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated arb package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Tue, 11 Dec 2012 09:59:08 +0100
Source: arb
Binary: arb libarb arb-common arb-doc
Architecture: source amd64 all
Version: 5.5-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
arb - Integrated package for sequence database handling and analysis
arb-common - Integrated package for sequence database handling and analysis
arb-doc - Integrated package for sequence database handling and analysis
libarb - Integrated package for sequence database handling and analysis
Closes: 686275 692499
Changes:
arb (5.5-1) unstable; urgency=low
.
* New upstream version (+adapted patches)
* Standards-Version: 3.9.4 (no changes needed)
* debian/po: Add Slovak po-debconf translation (Thanks to
Slavko <[email protected]> for the translation)
Closes: #686275
* debian/rules: Add '-lm' as suggested in patch by Konstantinos Margaritis
<[email protected]> to fix the build problem on armhf.
This together with new upstream closes: #692499
Checksums-Sha1:
58436c347db7070d79b61f7692581b351f75c0a5 1689 arb_5.5-1.dsc
b3d995776df96e1a37e1d1cd78fb2061c8f0cafa 9539770 arb_5.5.orig.tar.gz
5bf8a72e1e9303840d3ee833775637d17680b43f 35268 arb_5.5-1.debian.tar.gz
c8dfcb0f9d6bc4d3d610b2e02bfcc3ddb63dd8e0 1273586 arb_5.5-1_amd64.deb
a3a110fd44d16e8cf897123abd99d623828561d9 822140 libarb_5.5-1_amd64.deb
dc0c63be96cf40079675caf01e9a18bc0cc4fe89 5137692 arb-common_5.5-1_all.deb
9f1ed89b9061c58dc0be9ab93e6f61bf52bbb56f 562760 arb-doc_5.5-1_all.deb
Checksums-Sha256:
d8e62ee8ddbee349df751f16aeb9c0e6fa982b105383c6ef74bca9d54f9cb718 1689
arb_5.5-1.dsc
25246355ccaebff2e3350a553732636896f0f9f21eca3bb2bcf75cbeb7ac92a9 9539770
arb_5.5.orig.tar.gz
85d92a710ec7e07a7c7c19f901f2daff2f1afcad1e644163ddb1860731b2442c 35268
arb_5.5-1.debian.tar.gz
d2df4cd67de796a29b9e0370440069fcc8c233f44b9acacd169ac6ebdc395ae1 1273586
arb_5.5-1_amd64.deb
7dba4e19d457c47131f58ebf229dee50c3da4ca5d90196a01dbc66f698c189af 822140
libarb_5.5-1_amd64.deb
6d17e7fd7568e57cc775b95bfe95de94b46680eb0e426c0e86e868a5a93eebee 5137692
arb-common_5.5-1_all.deb
b0b0cc6deb15d315407c51f900d681c4fce716e184a6a55295557245b5f6033e 562760
arb-doc_5.5-1_all.deb
Files:
f007678355e4efeed15cea126fa4c3c8 1689 non-free/science optional arb_5.5-1.dsc
bf6d65ea24214115d9b5f8902953a6db 9539770 non-free/science optional
arb_5.5.orig.tar.gz
7e10cc172506dc2715c556e2d919e891 35268 non-free/science optional
arb_5.5-1.debian.tar.gz
d48f86978a0da7f53594051f626aa7d2 1273586 non-free/science optional
arb_5.5-1_amd64.deb
48866fc987916ac2c73d0c927ea1558c 822140 non-free/science optional
libarb_5.5-1_amd64.deb
3545a24b1c531ff089ba50037004fb00 5137692 non-free/science optional
arb-common_5.5-1_all.deb
6fc6cecce38b3ee798054ee48da78938 562760 non-free/doc optional
arb-doc_5.5-1_all.deb
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.12 (GNU/Linux)
iEYEARECAAYFAlDI468ACgkQYDBbMcCf01pjewCfQ2AoUfVQrLsx9xlrcZCvwhBo
FMYAniv1tgphFCeARlGSTsZmJBjg7mar
=GSCD
-----END PGP SIGNATURE-----
--- End Message ---
