Your message dated Thu, 05 Sep 2013 03:33:20 +0000 with message-id <[email protected]> and subject line Bug#721770: fixed in mothur 1.31.2+dfsg-2 has caused the Debian Bug report #721770, regarding mothur: FTBFS on ia64: unrecognized command line option '-m64' to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 721770: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=721770 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: mothur Version: 1.31.2+dfsg-1 Severity: serious Justification: fails to build from source The ia64 build of mothur failed because GCC doesn't recognize -m64 there: if [ 64 -eq 64 ] ; then \ dh_auto_build -- 64BIT_VERSION=yes USEMPI=yes && \ mv mothur mothur-mpi && make clean && \ dh_auto_build -- 64BIT_VERSION=yes USEMPI=no ; \ else \ dh_auto_build -- 64BIT_VERSION=no ; \ fi make[2]: Entering directory `/«BUILDDIR»/mothur-1.31.2+dfsg' gfortran -c -m64 *.f f951: error: unrecognized command line option '-m64' I'd suggest doing away with that flag altogether, since it's redundant on the architectures that do support it (disregarding multiarch compiler installations, on which mothur of course doesn't build-depend). Could you please look into it? Thanks!
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--- Begin Message ---Source: mothur Source-Version: 1.31.2+dfsg-2 We believe that the bug you reported is fixed in the latest version of mothur, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Aaron M. Ucko <[email protected]> (supplier of updated mothur package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Wed, 04 Sep 2013 22:37:31 -0400 Source: mothur Binary: mothur mothur-mpi Architecture: source amd64 Version: 1.31.2+dfsg-2 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Aaron M. Ucko <[email protected]> Description: mothur - sequence analysis suite for research on microbiota mothur-mpi - mpi-enabled binary for mothur Closes: 721770 Changes: mothur (1.31.2+dfsg-2) unstable; urgency=low . * Team upload. * debian/patches/makefile.patch: Leave off -m64, which ia64 doesn't support and other 64-bit architectures don't need. (Closes: #721770.) Checksums-Sha1: 7de6b545b6148eeef75f91d481b6e30d77015f94 2120 mothur_1.31.2+dfsg-2.dsc 782a5bb81a7c30d8473acf33807d84efd5d7fd78 15303 mothur_1.31.2+dfsg-2.debian.tar.gz 5db8cc7e311217c38ec49cb4baeb6523c3c0f234 4959592 mothur_1.31.2+dfsg-2_amd64.deb ace34b69202d81b9de81d14ffb3e2358094c0108 5148962 mothur-mpi_1.31.2+dfsg-2_amd64.deb Checksums-Sha256: e635400f8adafecffac768da2b9a523416944c9dd15b0f9dacea8e46b6ee2eff 2120 mothur_1.31.2+dfsg-2.dsc 779992fac71a1fd7d4416eefbdd17f52e698b469e571cc0b74b4cd6768d96657 15303 mothur_1.31.2+dfsg-2.debian.tar.gz 1173c6269970e3517f5527081a6abf8bed9b85b34b0dee5222b285839fd83ee3 4959592 mothur_1.31.2+dfsg-2_amd64.deb 8bcd165173e0b8a0efa788f6f9476fb89b6b1939340e77f9f96dd366e3dcb267 5148962 mothur-mpi_1.31.2+dfsg-2_amd64.deb Files: aa891bb7252f72b9d2676ef9340a2633 2120 science optional mothur_1.31.2+dfsg-2.dsc 89c49cc9f5f99006fd3efe589576f0bd 15303 science optional mothur_1.31.2+dfsg-2.debian.tar.gz b23da21c82307446175b446b7aa99412 4959592 science optional mothur_1.31.2+dfsg-2_amd64.deb f77f2579f3c295d41dfbc78e8a10acf0 5148962 science optional mothur-mpi_1.31.2+dfsg-2_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.14 (GNU/Linux) iQIcBAEBCAAGBQJSJ/lqAAoJEB5wkbHxSmSieXIQAKZsE9gl8KemTudQ9sJbWqI/ K0Te0sJ7VjLXG4DvCBSbhN6ych03myGEALd8ted6sJDS/l0jQCYt4rYCqxU1M33c jI3kJvjRArDGtyEjNRy139NVVSFP7xmSFybsNX0Ce8jXg5FcCjGGdIozGntQzmnO n/9Ucb8Eihx4MVDebvSe52YRwBFEOnFWpFnLS+VhYG3t4oZ9mQAXvJ6gecCjRHnj xHQun3pHw9rK3z5hv3LGNkTunDF3/eWmiQIovjkoI1pFhI6hWYQB7MZYwoEY//T6 udYzj1ekIRJ/esWTCk17dzTf86Uu1XvXDVCuCIJ+1TVJDZ6jK9vBWX1+sE6CIp4V p9yh7Pgt3/tWROUJlqkOG0iU9RQqufVR8uwcY445rgaDAk7L2TUAiRbf2KwYEe+5 UroeHTrqtMhKHAqcwLoFVo0cBxSFW4tApy1z9mBcSzTvsyCMWBiafg6NVMb+d72Y WK/7ynVkwaIC36jEoTBEOPioEKbOZgferNkrH+vr3fK9N7EDmNxhr+vT225xCTLb fyRy5TtjYWH/+fqJR0wr/Bo/VtpTiWO9s3DZMmUo+pukEM6Er+cJw+xFgN37gI/7 1dyC/RGX9798pLVNYlxgpfI8g+SKLPDY1uhyRzAu2IhRZiexF6/1jn74nEDPhtZq Xf3YOgyNql/fLn+qEeTh =THEu -----END PGP SIGNATURE-----
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