Your message dated Sat, 18 Jan 2014 03:41:11 +0100
with message-id <2705240.sPIUy9X3M5@sephirot>
and subject line Builds ok
has caused the Debian Bug report #713341,
regarding cmtk: FTBFS: CMake Error at CMakeLists.txt:53 (INCLUDE): include
could not find load file:
/«PKGBUILDDIR»/obj-x86_64-linux-gnu/CMakeFiles/CMakeSystem.cmake
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
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immediately.)
--
713341: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=713341
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: cmtk
Version: 2.2.2-2
Severity: serious
Tags: jessie sid
User: [email protected]
Usertags: qa-ftbfs-20130620 qa-ftbfs
Justification: FTBFS on amd64
Hi,
During a rebuild of all packages in sid, your package failed to build on
amd64.
Relevant part:
> make[1]: Entering directory `/«PKGBUILDDIR»'
> dh_auto_configure -- \
> -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
> -DBUILD_APPS:BOOL=ON \
> -DBUILD_DOCUMENTATION:BOOL=OFF \
> -DBUILD_GUI:BOOL=ON \
> -DBUILD_SHARED_LIBS:BOOL=ON \
> -DBUILD_TESTING:BOOL=OFF \
> -DCMTK_BUILD_DCMTK:BOOL=OFF \
> -DCMTK_BUILD_MXML:BOOL=OFF \
> -DCMTK_BUILD_NRRD:BOOL=ON \
> -DCMTK_BUILD_SQLITE:BOOL=OFF \
> -DCMTK_BUILD_ZLIB:BOOL=OFF \
> -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas \
> -DCMTK_USE_DCMTK:BOOL=ON \
> -DCMTK_USE_FFTW:BOOL=ON \
> -DCMTK_USE_QT:BOOL=ON \
> -DCMTK_USE_SMP:BOOL=ON \
> -DCMTK_USE_SQLITE:BOOL=ON \
> -DDART_TESTING_TIMEOUT:STRING=15000 \
> -DMXML_INCLUDE_DIR:PATH=/usr/include \
> -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma \
> -DCMAKE_SKIP_RPATH:BOOL=OFF \
> -DCMTK_BUILD_WRAPPER:BOOL=ON \
>
> mkdir -p obj-x86_64-linux-gnu
> cd obj-x86_64-linux-gnu
> cmake .. -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_VERBOSE_MAKEFILE=ON
> -DCMAKE_BUILD_TYPE=RelWithDebInfo -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON
> -DBUILD_APPS:BOOL=ON -DBUILD_DOCUMENTATION:BOOL=OFF -DBUILD_GUI:BOOL=ON
> -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF
> -DCMTK_BUILD_DCMTK:BOOL=OFF -DCMTK_BUILD_MXML:BOOL=OFF
> -DCMTK_BUILD_NRRD:BOOL=ON -DCMTK_BUILD_SQLITE:BOOL=OFF
> -DCMTK_BUILD_ZLIB:BOOL=OFF
> -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas
> -DCMTK_USE_DCMTK:BOOL=ON -DCMTK_USE_FFTW:BOOL=ON -DCMTK_USE_QT:BOOL=ON
> -DCMTK_USE_SMP:BOOL=ON -DCMTK_USE_SQLITE:BOOL=ON
> -DDART_TESTING_TIMEOUT:STRING=15000 -DMXML_INCLUDE_DIR:PATH=/usr/include
> -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma -DCMAKE_SKIP_RPATH:BOOL=OFF
> -DCMTK_BUILD_WRAPPER:BOOL=ON
> -- The C compiler identification is GNU 4.8.1
> -- The CXX compiler identification is GNU 4.8.1
> -- Check for working C compiler: /usr/bin/cc
> -- Check for working C compiler: /usr/bin/cc -- works
> -- Detecting C compiler ABI info
> -- Detecting C compiler ABI info - done
> -- Check for working CXX compiler: /usr/bin/c++
> -- Check for working CXX compiler: /usr/bin/c++ -- works
> -- Detecting CXX compiler ABI info
> -- Detecting CXX compiler ABI info - done
> CMake Error at CMakeLists.txt:53 (INCLUDE):
> include could not find load file:
>
> /«PKGBUILDDIR»/obj-x86_64-linux-gnu/CMakeFiles/CMakeSystem.cmake
>
>
> -- Looking for sys/types.h
> -- Looking for sys/types.h - found
> -- Looking for stdint.h
> -- Looking for stdint.h - found
> -- Looking for stddef.h
> -- Looking for stddef.h - found
> -- Check size of int
> -- Check size of int - done
> -- Check size of long
> -- Check size of long - done
> -- Check size of void*
> -- Check size of void* - done
> -- Check size of char
> -- Check size of char - done
> -- Check size of short
> -- Check size of short - done
> -- Check size of float
> -- Check size of float - done
> -- Check size of double
> -- Check size of double - done
> -- Looking for limits.h
> -- Looking for limits.h - found
> -- Looking for unistd.h
> -- Looking for unistd.h - found
> -- Looking for pthread.h
> -- Looking for pthread.h - found
> -- Looking for include files sys/types.h, sys/prctl.h
> -- Looking for include files sys/types.h, sys/prctl.h - found
> -- Check if the system is big endian
> -- Searching 16 bit integer
> -- Check size of unsigned short
> -- Check size of unsigned short - done
> -- Using unsigned short
> -- Check if the system is big endian - little endian
> -- Looking for pthread_create
> -- Looking for pthread_create - not found
> -- Looking for pthread_create in pthreads
> -- Looking for pthread_create in pthreads - not found
> -- Looking for pthread_create in pthread
> -- Looking for pthread_create in pthread - found
> -- Found Threads: TRUE
> -- Looking for C++ include iostream
> -- Looking for C++ include iostream - found
> -- Check for STD namespace
> -- Check for STD namespace - found
> -- Check for ANSI scope
> -- Check for ANSI scope - found
> -- Check for sstream
> -- Check for sstream - found
> -- System is Linux-2.6.32-5-xen-amd64
> -- Looking for include file dirent.h
> -- Looking for include file dirent.h - found
> -- Looking for include file execinfo.h
> -- Looking for include file execinfo.h - found
> -- Looking for include file fcntl.h
> -- Looking for include file fcntl.h - found
> -- Looking for include file ieeefp.h
> -- Looking for include file ieeefp.h - not found
> -- Looking for include file inttypes.h
> -- Looking for include file inttypes.h - found
> -- Looking for include file malloc.h
> -- Looking for include file malloc.h - found
> -- Looking for include file pthread.h
> -- Looking for include file pthread.h - found
> -- Looking for include file termios.h
> -- Looking for include file termios.h - found
> -- Looking for include file unistd.h
> -- Looking for include file unistd.h - found
> -- Looking for include file values.h
> -- Looking for include file values.h - found
> -- Looking for include file sys/ioctl.h
> -- Looking for include file sys/ioctl.h - found
> -- Looking for include file sys/procfs.h
> -- Looking for include file sys/procfs.h - found
> -- Looking for include file sys/stat.h
> -- Looking for include file sys/stat.h - found
> -- Looking for include file sys/time.h
> -- Looking for include file sys/time.h - found
> -- Looking for include file sys/times.h
> -- Looking for include file sys/times.h - found
> -- Looking for include file sys/utsname.h
> -- Looking for include file sys/utsname.h - found
> -- Check if the system is big endian
> -- Searching 16 bit integer
> -- Using unsigned short
> -- Check if the system is big endian - little endian
> -- Check the value of the 22nd bit of a 32-bit quiet-NaN
> -- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1
> -- Looking for C++ include unordered_map
> -- Looking for C++ include unordered_map - not found
> -- Looking for C++ include hash_map
> -- Looking for C++ include hash_map - found
> -- Try OpenMP C flag = [-fopenmp]
> -- Performing Test OpenMP_FLAG_DETECTED
> -- Performing Test OpenMP_FLAG_DETECTED - Success
> -- Try OpenMP CXX flag = [-fopenmp]
> -- Performing Test OpenMP_FLAG_DETECTED
> -- Performing Test OpenMP_FLAG_DETECTED - Success
> -- Found OpenMP: -fopenmp
> -- Looking for include file dispatch/dispatch.h
> -- Looking for include file dispatch/dispatch.h - not found
> -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE
> -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE - Success
> -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
> -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.8")
> -- Using system zlib
> -- Using system mxml
> -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.6")
> -- Looking for BZ2_bzCompressInit in /usr/lib/x86_64-linux-gnu/libbz2.so
> -- Looking for BZ2_bzCompressInit in /usr/lib/x86_64-linux-gnu/libbz2.so -
> found
> -- Found system libbz2
> -- Could NOT find LZMA (missing: LZMA_LIBRARIES LZMA_INCLUDE_DIRS)
> -- Found DCMTK: /usr/include/dcmtk/config
> -- - tested library png
> -- - tested library tiff
> -- - tested library CharLS
> -- Using system DCMTK library.
> -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE)
> -- Found SQLite3: /usr/lib/x86_64-linux-gnu/libsqlite3.so
> -- Using system sqlite3 library
> -- Looking for Q_WS_X11
> -- Looking for Q_WS_X11 - found
> -- Looking for Q_WS_WIN
> -- Looking for Q_WS_WIN - not found
> -- Looking for Q_WS_QWS
> -- Looking for Q_WS_QWS - not found
> -- Looking for Q_WS_MAC
> -- Looking for Q_WS_MAC - not found
> -- Found Qt4: /usr/bin/qmake (found suitable version "4.8.4", minimum
> required is "4.3.0")
> Qt4 Found OK ()
> -- Configuring incomplete, errors occurred!
> dh_auto_configure: cmake .. -DCMAKE_INSTALL_PREFIX=/usr
> -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_BUILD_TYPE=RelWithDebInfo
> -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DBUILD_APPS:BOOL=ON
> -DBUILD_DOCUMENTATION:BOOL=OFF -DBUILD_GUI:BOOL=ON
> -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF
> -DCMTK_BUILD_DCMTK:BOOL=OFF -DCMTK_BUILD_MXML:BOOL=OFF
> -DCMTK_BUILD_NRRD:BOOL=ON -DCMTK_BUILD_SQLITE:BOOL=OFF
> -DCMTK_BUILD_ZLIB:BOOL=OFF
> -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas
> -DCMTK_USE_DCMTK:BOOL=ON -DCMTK_USE_FFTW:BOOL=ON -DCMTK_USE_QT:BOOL=ON
> -DCMTK_USE_SMP:BOOL=ON -DCMTK_USE_SQLITE:BOOL=ON
> -DDART_TESTING_TIMEOUT:STRING=15000 -DMXML_INCLUDE_DIR:PATH=/usr/include
> -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma -DCMAKE_SKIP_RPATH:BOOL=OFF
> -DCMTK_BUILD_WRAPPER:BOOL=ON returned exit code 1
> make[1]: *** [override_dh_auto_configure] Error 2
The full build log is available from:
http://aws-logs.debian.net/ftbfs-logs/2013/06/20/cmtk_2.2.2-2_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---
Now builds ok, closing it.
--- End Message ---
