Your message dated Fri, 11 Jul 2014 15:34:16 +0000
with message-id <[email protected]>
and subject line Bug#748947: fixed in cmor 2.9.1-3
has caused the Debian Bug report #748947,
regarding src:cmor: FTBFS on ppc64el
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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misconfiguration somewhere. Please contact [email protected]
immediately.)
--
748947: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=748947
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:cmor
Version: 2.8.0-4
Severity: normal
Tags: patch
Dear Maintainer,
On Ubuntu the attached patch was applied to achieve the following:
* d/rules: Fix misspelling.
* d/control: Add missing build-dependencies for ppc64el.
* Explicitly link missing netcdf lib dependencies for ppc64el.
Thanks for considering the patch.
Erwan Prioul.
-- System Information:
Debian Release: jessie/sid
APT prefers unstable
APT policy: (500, 'unstable')
Architecture: ppc64el (ppc64le)
Kernel: Linux 3.13-1-powerpc64le (SMP w/1 CPU core)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
--- a/configure.ac
+++ b/configure.ac
@@ -211,28 +211,28 @@ if [ test ${with_netcdfb} != "-yes" ]; t
AC_CHECK_FILE([${with_netcdf}/bin/nc-config],[HAS_NCCONFIG=yes],[HAS_NCCONFIG=no])
if [ test ${HAS_NCCONFIG} == "yes" ] ; then
NCCFLAGS=`${with_netcdf}/bin/nc-config --cflags`
- NCLDFLAGS=`${with_netcdf}/bin/nc-config --libs`
+ NCLDFLAGS="`${with_netcdf}/bin/nc-config --libs` ${EXTRA_NCLDFLAGS}"
else
#echo "CRAP!"
NCCFLAGS=" -I${with_netcdf}/include"
if [ test ${RTAG} != "none" ] ; then
- NCLDFLAGS=" -L${with_netcdf}/lib ${RTAG}${with_netcdf}/lib -lnetcdf"
+ NCLDFLAGS=" -L${with_netcdf}/lib ${RTAG}${with_netcdf}/lib -lnetcdf ${EXTRA_NCLDFLAGS}"
else
- NCLDFLAGS=" -L${with_netcdf}/lib -lnetcdf"
+ NCLDFLAGS=" -L${with_netcdf}/lib -lnetcdf ${EXTRA_NCLDFLAGS}"
fi
fi
else
NCCFLAGS="-lnetcdf"
- NCLDFLAGS=""
+ NCLDFLAGS=" ${EXTRA_NCLDFLAGS}"
fi
else
AC_PATH_PROG(NCCONFIG,nc-config,"no")
if [ test NCCONFIG != "no" ] ; then
NCCFLAGS=`${NCCONFIG} --cflags`
- NCLDFLAGS=`${NCCONFIG} --libs`
+ NCLDFLAGS="`${NCCONFIG} --libs` ${EXTRA_NCLDFLAGS}"
else
NCCFLAGS="-lnetcdf"
- NCLDFLAGS=""
+ NCLDFLAGS=" ${EXTRA_NCLDFLAGS}"
fi
fi
--- a/debian/control
+++ b/debian/control
@@ -2,7 +2,7 @@
Section: utils
Priority: extra
Maintainer: Alastair McKinstry <[email protected]>
-Build-Depends: debhelper (>= 8.1.3~), dh-buildinfo, libossp-uuid-dev, libudunits2-dev, libnetcdf-dev, uuid-dev, python-all-dev (>= 2.6.6-3~), python-setuptools (>= 0.6b3), libgfortran3, automake, python-numpy, gfortran
+Build-Depends: debhelper (>= 8.1.3~), dh-buildinfo, libossp-uuid-dev, libudunits2-dev, libnetcdf-dev, uuid-dev, python-all-dev (>= 2.6.6-3~), python-setuptools (>= 0.6b3), libgfortran3, automake, python-numpy, gfortran, pkg-config, libcurl4-gnutls-dev, libldap2-dev, heimdal-multidev, libsqlite3-dev, libsasl2-dev, libkeyutils-dev, libffi-dev, libhdf5-mpi-dev | libhdf5-dev
Build-Conflicts: libcmor2
Standards-Version: 3.9.3
Homepage: http://www2-pcmdi.llnl.gov/cmor
--- a/debian/rules
+++ b/debian/rules
@@ -7,7 +7,9 @@ DEB_HOST_MULTIARCH ?= $(shell dpkg-archi
LIBDIR=/usr/lib/$(DEB_HOST_MULTIARCH)
BUILD_ARCH_OS :-= $(shell dpkg-architecture -qDEB_BUILD_ARCH_OS)
-BUILD_ARCH_CPU := $(shell dpkg-archtiecture -qDEB_BUILD_ARCH_CPU)
+BUILD_ARCH_CPU := $(shell dpkg-architecture -qDEB_BUILD_ARCH_CPU)
+
+NETCDF_LIBS ?= $(shell pkg-config --libs heimdal-gssapi netcdf libffi)
%:
dh $@ --with python2
@@ -16,7 +18,10 @@ override_dh_auto_configure:
autoreconf -fiv
ln -sf /usr/share/misc/config.sub
dh_auto_configure -- --disable-color --enable-verbose-test \
- UUIDLDFLAGS="-lossp-uuid" UUIDFLAGS="-I/usr/include/ossp" SZLIBFLAGS=nosz
+ UUIDLDFLAGS="-lossp-uuid" UUIDFLAGS="-I/usr/include/ossp" SZLIBFLAGS=nosz \
+ EXTRA_NCLDFLAGS="-lhdf5 -lm -lcurl $(NETCDF_LIBS) -lz -lidn -lrtmp -lgcrypt \
+ -lgnutls -lgssapi_krb5 -llber -lldap_r -lgpg-error -ltasn1 -lp11-kit \
+ -lk5crypto -lkrb5support -lsasl2 -lkeyutils -lsqlite3"
override_dh_auto_clean:
rm -rf config.sub config.log config.status libcmor.a libcmor.so.2 build test_grid
--- End Message ---
--- Begin Message ---
Source: cmor
Source-Version: 2.9.1-3
We believe that the bug you reported is fixed in the latest version of
cmor, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Alastair McKinstry <[email protected]> (supplier of updated cmor package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 11 Jul 2014 10:09:09 +0100
Source: cmor
Binary: libcmor2 libcmor-dev python-cmor
Architecture: source amd64
Version: 2.9.1-3
Distribution: unstable
Urgency: medium
Maintainer: Alastair McKinstry <[email protected]>
Changed-By: Alastair McKinstry <[email protected]>
Description:
libcmor-dev - Development files for Climate Model Output Rewriter
libcmor2 - Climate Model Output Rewriter library
python-cmor - Python interface to CMOR
Closes: 748947
Changes:
cmor (2.9.1-3) unstable; urgency=medium
.
* Add patch for ppc64el. Needs krb, gssapi and friends. Closes: #748947.
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