Your message dated Sat, 11 Jul 2015 06:49:56 +0000 with message-id <[email protected]> and subject line Bug#792058: fixed in python-cobra 0.4.0b1-2 has caused the Debian Bug report #792058, regarding python3-cobra: SyntaxError: invalid syntax (2.x-isms) to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 792058: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=792058 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: python3-cobra Version: 0.4.0b1-1 Severity: grave Justification: renders package unusable (uninstallable) Byte compilation of python3-cobra is failing due to the presence of syntax that was only valid in Python 2.x: Setting up python3-cobra (0.4.0b1-1) ... File "/usr/lib/python3/dist-packages/cobra/solvers/glpk_solver_java.py", line 86 except Exception, e1: ^ SyntaxError: invalid syntax File "/usr/lib/python3/dist-packages/cobra/solvers/cplex_solver_java.py", line 318 print '%s failed: %s'%(solver_name, status) ^ SyntaxError: invalid syntax File "/usr/lib/python3/dist-packages/cobra/solvers/gurobi_solver_java.py", line 73 except Exception, e: ^ SyntaxError: invalid syntax dpkg: error processing package python3-cobra (--configure): subprocess installed post-installation script returned error exit status 1 Could you please take a look? Thanks!
--- End Message ---
--- Begin Message ---Source: python-cobra Source-Version: 0.4.0b1-2 We believe that the bug you reported is fixed in the latest version of python-cobra, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Afif Elghraoui <[email protected]> (supplier of updated python-cobra package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Fri, 10 Jul 2015 18:35:52 -0700 Source: python-cobra Binary: python-cobra python3-cobra python-cobra-data Architecture: source all amd64 Version: 0.4.0b1-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Afif Elghraoui <[email protected]> Description: python-cobra - constraint-based modeling of biological networks (Python 2) python-cobra-data - constraint-based modeling of biological networks (data) python3-cobra - constraint-based modeling of biological networks (Python 3) Closes: 792058 Changes: python-cobra (0.4.0b1-2) unstable; urgency=medium . * Add more recommended packages in d/control * Add suggestion of jython for python-cobra * Really remove jython files from python3-package. Thanks to Aaron Ucko for the bug report (Closes: 792058) Checksums-Sha1: 5ae827b4d9b69879fc2f1fbacb49e07ce06665a8 2276 python-cobra_0.4.0b1-2.dsc fd909067ca652dd31794c9fee68527faf444d1a3 4008 python-cobra_0.4.0b1-2.debian.tar.xz f495b6be006a663335a4edacbcd9dd8ebe29dc8d 849184 python-cobra-data_0.4.0b1-2_all.deb 4c003b6e1f680f9345a1cacc8b961bbd0c50afdc 136956 python-cobra_0.4.0b1-2_amd64.deb 4516be14dfc693d9dcc217c4d4980f5e35044a89 132672 python3-cobra_0.4.0b1-2_amd64.deb Checksums-Sha256: 360437dce284c725580e470b0ab1e0b6f16da165ad42513d539a2b8547cf71a9 2276 python-cobra_0.4.0b1-2.dsc cbb8dcc0c3c39ecfb2ab83fc1dec983fd9ae3e8cd0f3db43647042c16b9a8b03 4008 python-cobra_0.4.0b1-2.debian.tar.xz bd90b6fb45a0c47fb0514156672802ad7b5d6ef3db17db17137769c9b425161f 849184 python-cobra-data_0.4.0b1-2_all.deb 8145d8a7dd635a89aa23dd8cc5094c1da33316734a97ca5c6ac7b72e4d9a30e1 136956 python-cobra_0.4.0b1-2_amd64.deb 5d10a23a5374aaa92aaeb879a3de6251acd59b41509dd26986f4fb6610cbe75b 132672 python3-cobra_0.4.0b1-2_amd64.deb Files: 1b5bc4a693f9123c592f15c1f78a55f9 2276 python optional python-cobra_0.4.0b1-2.dsc 01d6ae70cf4c625bca1229de5ee499ef 4008 python optional python-cobra_0.4.0b1-2.debian.tar.xz 67da7bfe911552ee5076e619b6ddfea3 849184 python optional python-cobra-data_0.4.0b1-2_all.deb 44da80ccbb58f76bc22cd3206ae59e6c 136956 python optional python-cobra_0.4.0b1-2_amd64.deb 90fc115dbf3aa467aea62254e947bfa2 132672 python optional python3-cobra_0.4.0b1-2_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJVoLoxAAoJEFeKBJTRxkbRO/oP/2lBSsQl8VvtcefjydnSslMd Blap4X2ZQsD2USblz1YfPMThQvMDOpb8vVmtGgrX2xmN3cTxFcDnCCnm4WSJK/qQ zyMAwk0u8zMIj2M6MZ/STKojxaQAs3P80u2dVhZodiQ5LG4/F0mOkbyiszYhKdKq V1V4l/Ryrko8HJnuICmYSXCMZCrXSXA/t7E97Mj7Kg5QQX3UEfNTNNHmqEipzIdT J99x0zwiAFPTKLxztccEDfGUYK2IXSlU9jTHG11DS4G1hytXtxiXj57MjGwuImXG HM0diWLACOezkQnxyQYj6rLHrklIuNOaj/4IkHYcK63OBTVXpq9v59bW4rnr19Bv 3/b4l/MHQdUYtwjgk0em/V5Y+T9zbGUNctU6piCf33TZYvHVg6hRa/f138Olfve+ a7tP7MTyP2x8KiCbCQeBBnA44P/G53K80rnY638s/15rGrRwSwRhdG37x6TIOw4X MMJcLFvPBW7Mf2NGhKkOTHQ5wqvJE4yWgm5gz2k4Y87jGFMDcaJIR8s38jounV0M EbkdrGGkp1X4HApZWq16N5Je5yriSTTZQdY50QJXa4KBDRZesIrs9EwOftbjGryC Ut+F2gmZwe4i2k7xDsiTlQALF3q8RAf8PL8ThGjWt1beMHjB7+9BMzlmadCuaoJv Zmua+nqrBGqp9Y/NIQMs =xNWt -----END PGP SIGNATURE-----
--- End Message ---
