Your message dated Wed, 07 Oct 2015 10:00:30 +0000 with message-id <[email protected]> and subject line Bug#797744: fixed in gromacs 5.1-1 has caused the Debian Bug report #797744, regarding gromacs: shared library in a package that is not renamed with its SONAME to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 797744: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=797744 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: gromacs Version: 5.0.6-1 Severity: serious Justification: Policy 8.1 The gromacs binary package contains a public shared library (libgromacs.so.0), and votca-csg depends on it. Policy ยง8.1 says: > The run-time shared library must be placed in a package whose name > changes whenever the SONAME of the shared library changes. In this case, the shared library package should be libgromacs0, and gromacs should depend on it. Not doing this makes SONAME transitions, C++ ABI transitions, etc. more painful for no good reason. S
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--- Begin Message ---Source: gromacs Source-Version: 5.1-1 We believe that the bug you reported is fixed in the latest version of gromacs, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Nicholas Breen <[email protected]> (supplier of updated gromacs package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Thu, 01 Oct 2015 17:38:08 -0700 Source: gromacs Binary: gromacs gromacs-data libgromacs1 libgromacs-dev gromacs-dev gromacs-mpich gromacs-openmpi Architecture: source all amd64 Version: 5.1-1 Distribution: unstable Urgency: low Maintainer: Debichem Team <[email protected]> Changed-By: Nicholas Breen <[email protected]> Description: gromacs - Molecular dynamics simulator, with building and analysis tools gromacs-data - GROMACS molecular dynamics sim, data and documentation gromacs-dev - Dummy package for libgromacs-dev gromacs-mpich - Molecular dynamics sim, binaries for MPICH parallelization gromacs-openmpi - Molecular dynamics sim, binaries for OpenMPI parallelization libgromacs-dev - GROMACS molecular dynamics sim, development kit libgromacs1 - GROMACS molecular dynamics sim, shared libraries Closes: 715934 797744 Changes: gromacs (5.1-1) unstable; urgency=low . * New upstream release. This release completes the transition to "gmx" as the sole binary to replace all the former g_* commands, and the compatibility symlinks have been removed. Standalone mdrun_mpi programs in gromacs-mpich and gromacs-openmpi are unaffected. - gmx anadock no longer crashes on invalid input. (Closes: #715934) * Some package reshuffling: gromacs-dev becomes libgromacs-dev, and the shared library gets split out into libgromacs1. (Closes: #797744) Upload priority set to "low" due to the unusually extensive restructure. * Remove gromacs-dev.preinst, only needed for upgrades from well before the version in squeeze. * Lots more documentation! PDF manual is built once again, and doxygen output for developer use is included. Several Build-Depends-Indep entries added to support this. - patches/manpage-hyphenation.patch removed, no longer needed. - mdrun_mpi.{mpich,openmpi}.1 updated. * debian/control: apply wrap-and-sort. Checksums-Sha1: ddce3c0233fbce05eda3e5ab344048bd07c65ce8 2823 gromacs_5.1-1.dsc 1630297e853ff9be0767cf348f86effafb1dc1a9 26546875 gromacs_5.1.orig.tar.gz 070410f0a5053bde4e206e50f938f95032b27f0a 31732 gromacs_5.1-1.debian.tar.xz a50bf2adb46a397d22b606b42e5e1a9be00c153f 22869008 gromacs-data_5.1-1_all.deb Checksums-Sha256: 29b604bb9c098e8f66080a2e59054e8096fd44beab1c30ff851b68fa678969b0 2823 gromacs_5.1-1.dsc 996b6061971e11942252de36b67b5cf35f02ce14adf80db8a3f079fc686c2743 26546875 gromacs_5.1.orig.tar.gz 063def5add5dad1b6ede94b7169aa1945c2c4fc1a1db0189c4f38498567c493e 31732 gromacs_5.1-1.debian.tar.xz 62fe280ce1417c65b3eb03af4b794bc6d6663f25c276dcef2dd3b0642295fc01 22869008 gromacs-data_5.1-1_all.deb Files: 0dfa9b3520cd7cfeb00e27ea9bd975ef 2823 science extra gromacs_5.1-1.dsc e5ba00d47c4c6dec107951a7d4605f31 26546875 science extra gromacs_5.1.orig.tar.gz e3e8c7ccb76c36a744ab284768c37ea8 31732 science extra gromacs_5.1-1.debian.tar.xz 3c4f766d3438d26753de1301df0ba84a 22869008 science extra gromacs-data_5.1-1_all.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIVAwUBVg3Wz+5K/WnsZRCPAQgq9A//XpjS7hhml47TZ48InURvLJ4sqtd/gZWe hqbZcSD72hZxy3CaXKFaf62VCFrAueCbqlulWp+RGiea9wGHMkIG3dtIa66yLVQO yGOaQu/NzV3fz1Wwh6o8tbRO1921R7mZIBJh1D4+T4XBP+O7K19XaxplQHWIfNTG +ZS0nykNtnj50PBVL6MKIckfQvVnPTNIdk844Cg0OlTGk5UtS3FXmrvwskUTGsKO DliE05GmvTZTsxysYPOcbt3X2D+3JB2GowFn1fx0GIf8Ef+u58fca5+D6Uv+12/C lnsOwhpu6Mz+duOX5lcwbRGli2AmvDpbNubIjh7+9pruyoeOK28ThE0ja6C8VXFE uDKn3fPMOf8LJ5Vn0bZ89lHwzIOApfaDw2hz9Bi7Ori7jHYXx7lq8X23V55ySfqd Gkl7XyR4M6djbwGgkQw4OHD3nQkAau5YFAtiCN9xyJ1/jrZAk9rqQsc7HxBC6mqQ v8/uM1bmnxwJb9/CFT3rNTf8m6hVwTOE9Vc44oAXrb7/zBn7R+hRgiuxRaEAs/y7 BJF/sBo96o6xHLxF9hzKjxRNI+y8NEPIXytSesbGs03dSwgGDQCd2ExStCdqhvaS N5dS1JcXtUhTYweO/iNFd//V1BeL416Xlo86qhFwBsHxIY8prcFzqUPwtCLuszVM /mh4FmKNWaU= =02z3 -----END PGP SIGNATURE-----
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