Your message dated Tue, 24 Nov 2015 19:34:15 +0000
with message-id <[email protected]>
and subject line Bug#806112: fixed in staden-io-lib 1.14.6-2
has caused the Debian Bug report #806112,
regarding staden-io-lib: FTBFS when built with dpkg-buildpackage -A (No such
file or directory)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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--
806112: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=806112
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:staden-io-lib
Version: 1.14.6-1
User: [email protected]
Usertags: binary-indep
Severity: important
Dear maintainer:
I tried to build this package with "dpkg-buildpackage -A"
(i.e. only architecture-independent packages), and it failed:
--------------------------------------------------------------------------------
[...]
fakeroot debian/rules binary-indep
dh binary-indep --with autoreconf
dh_testroot -i
dh_prep -i
dh_auto_install -i
make -j1 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp
AM_UPDATE_INFO_DIR=no
make[1]: Entering directory '/<<PKGBUILDDIR>>'
Making install in io_lib
make[2]: Entering directory '/<<PKGBUILDDIR>>/io_lib'
make[3]: Entering directory '/<<PKGBUILDDIR>>/io_lib'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu'
/bin/bash ../libtool --mode=install /usr/bin/install -c libstaden-read.la
'/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu'
libtool: install: /usr/bin/install -c .libs/libstaden-read.so.11.0.5
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/libstaden-read.so.11.0.5
libtool: install: (cd /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu && {
ln -s -f libstaden-read.so.11.0.5 libstaden-read.so.11 || { rm -f
libstaden-read.so.11 && ln -s libstaden-read.so.11.0.5 libstaden-read.so.11; };
})
libtool: install: (cd /<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu && {
ln -s -f libstaden-read.so.11.0.5 libstaden-read.so || { rm -f
libstaden-read.so && ln -s libstaden-read.so.11.0.5 libstaden-read.so; }; })
libtool: install: /usr/bin/install -c .libs/libstaden-read.lai
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/libstaden-read.la
libtool: install: /usr/bin/install -c .libs/libstaden-read.a
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/libstaden-read.a
libtool: install: chmod 644
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/libstaden-read.a
libtool: install: ranlib
/<<PKGBUILDDIR>>/debian/tmp/usr/lib/x86_64-linux-gnu/libstaden-read.a
libtool: install: warning: remember to run `libtool --finish
/usr/lib/x86_64-linux-gnu'
make[3]: Nothing to be done for 'install-data-am'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/io_lib'
[... snipped ...]
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_install
mkdir -p /<<PKGBUILDDIR>>/debian/libstaden-read-dev/usr/bin
mv /<<PKGBUILDDIR>>/debian/staden-io-lib-utils/usr/bin/io_lib-config
/<<PKGBUILDDIR>>/debian/libstaden-read-dev/usr/bin
mv: cannot stat
'/<<PKGBUILDDIR>>/debian/staden-io-lib-utils/usr/bin/io_lib-config': No such
file or directory
debian/rules:14: recipe for target 'override_dh_install' failed
make[1]: *** [override_dh_install] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules:11: recipe for target 'binary-indep' failed
make: *** [binary-indep] Error 2
dpkg-buildpackage: error: fakeroot debian/rules binary-indep gave error exit
status 2
--------------------------------------------------------------------------------
Sorry not to have a fix, as I am reporting many bugs similar to
this one, but I can give some general hints:
* If all the arch-independent packages are dummy transitional packages
released with jessie, the easy fix is to drop them now.
* If not, debian/rules should be modified so that the binary-indep
target works in all cases, even when binary-arch is not used (this is
what the "Architecture: all" autobuilder does). For that:
* If you are using debhelper, you might want to use options -a and -i
for dh_* commands so that they do not act on packages they do not
have to act.
* Also, if you are using dh, the (independently) optional targets
override_dh_foo-arch and override_dh_foo-indep (for several values
of "foo") may be useful to write a debian/rules which behaves exactly
as desired.
After checking that both "dpkg-buildpackage -A" and "dpkg-buildpackage -B"
work properly, this package will be suitable to be uploaded in
source-only form if you wish (you might want to try it).
Thanks.
--- End Message ---
--- Begin Message ---
Source: staden-io-lib
Source-Version: 1.14.6-2
We believe that the bug you reported is fixed in the latest version of
staden-io-lib, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated staden-io-lib package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Tue, 24 Nov 2015 20:15:14 +0100
Source: staden-io-lib
Binary: staden-io-lib-utils libstaden-read-dev libstaden-read11
staden-io-lib-examples
Architecture: source amd64 all
Version: 1.14.6-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
libstaden-read-dev - development files for libstaden-read
libstaden-read11 - Staden library for reading and writing DNA sequencing
results
staden-io-lib-examples - programs for maniuplating DNA sequencing files (usage
examples)
staden-io-lib-utils - programs for maniuplating DNA sequencing files
Closes: 806112
Changes:
staden-io-lib (1.14.6-2) unstable; urgency=medium
.
* Enable separate building of arch independet packages
Closes: #806112
* Adapt to latest d-shlibs
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Files:
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staden-io-lib_1.14.6-2.dsc
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libstaden-read-dev_1.14.6-2_amd64.deb
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libstaden-read11_1.14.6-2_amd64.deb
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staden-io-lib-examples_1.14.6-2_all.deb
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staden-io-lib-utils_1.14.6-2_amd64.deb
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