Your message dated Wed, 09 Dec 2015 16:28:36 +0000 with message-id <[email protected]> and subject line Bug#793512: fixed in htslib 1.2.1-2 has caused the Debian Bug report #793512, regarding htslib: FTBFS on hurd-i386: 'PATH_MAX' undeclared to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 793512: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=793512 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: htslib Version: 1.2.1-1 Severity: important The hurd-i386 build of htslib failed because the Hurd has no hard limit on path lengths: cram/cram_index.c: In function 'cram_index_load': cram/cram_index.c:142:14: error: 'PATH_MAX' undeclared (first use in this function) char fn2[PATH_MAX]; I'd suggest conditionally imposing your own limit; I believe 4096 is traditional. Thanks!
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--- Begin Message ---Source: htslib Source-Version: 1.2.1-2 We believe that the bug you reported is fixed in the latest version of htslib, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <[email protected]> (supplier of updated htslib package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Wed, 09 Dec 2015 17:00:47 +0100 Source: htslib Binary: libhts1 libhts-dev htslib-test tabix Architecture: source all amd64 Version: 1.2.1-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Andreas Tille <[email protected]> Description: htslib-test - Test data for HTSlib libhts-dev - Development files for the HTSlib libhts1 - C library for high-throughput sequencing data formats tabix - generic indexer for TAB-delimited genome position files Closes: 716376 793512 Changes: htslib (1.2.1-2) unstable; urgency=medium . * Team upload * Enable build on hurd-i386 Closes: #793512 * More verbose description vor -dev and -test package * Fix lintian override * Verified Mayhem bug report which is solved in this version Closes: #716376 Checksums-Sha1: d44fd166b4fea4cf67cb22b59b2bc6774ed1c8ac 2083 htslib_1.2.1-2.dsc ce229f3a5a78e9516f5a7f752d6957598d680cff 8756 htslib_1.2.1-2.debian.tar.xz 2c5f04e1313f4478085db5c6dda809be8c22251f 517018 htslib-test_1.2.1-2_all.deb 4bef082cc65d21b3adcd85f95eb1b3373ecb6458 277646 libhts-dev_1.2.1-2_amd64.deb b769299ef84da9c1eae2c5c43aa13e997dc96551 228332 libhts1_1.2.1-2_amd64.deb 6b8e0b403c186e69ab63f54882ba10ca55316add 224496 tabix_1.2.1-2_amd64.deb Checksums-Sha256: d1b208ffc81e987e5d969d2b8563566e6c697f07bcf376c2edf2ccbeed14ce5e 2083 htslib_1.2.1-2.dsc 2d553c3c3142aef5a7d276bdb504f28d15fb60bd2d0f52a6ebeff3ba71d19811 8756 htslib_1.2.1-2.debian.tar.xz 1e7bf933ea210986a7a7f5233fff99eb279979b6cbba54803287cd2c0bcecff9 517018 htslib-test_1.2.1-2_all.deb 48ea307ca8b040cca1c3167e6310cee65665da0591505cc992d9d96e92f105df 277646 libhts-dev_1.2.1-2_amd64.deb 4e73b352e10b191790e11db8c040f81e534936c02590692e2ca83c33677bf03d 228332 libhts1_1.2.1-2_amd64.deb cabcc87523e8f5f8e2ffd1745fd36ff5c4a83276eea7f2d98d50875e35c9d27a 224496 tabix_1.2.1-2_amd64.deb Files: 0a4cb6ff85181d9acc08f63f642ac5c8 2083 science optional htslib_1.2.1-2.dsc f729f09ec310026ef3479bf46148f5d9 8756 science optional htslib_1.2.1-2.debian.tar.xz e38afce0e34fcdd4d13565fef1242202 517018 science optional htslib-test_1.2.1-2_all.deb 615992e9984f6efc77763effaa84df70 277646 libdevel optional libhts-dev_1.2.1-2_amd64.deb 25323e3971a0dbecc8b555dee75a3e21 228332 libs optional libhts1_1.2.1-2_amd64.deb 7ccda2ea913578632f63ab252ff7317c 224496 science optional tabix_1.2.1-2_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJWaFDUAAoJEFeKBJTRxkbRnFwP/397SgbHz3vaLX2E5IHnuKWc Tq/29Xng+3ETBc7VlSr3FjhxJu7VN8c3YQJKhQZcb6OPuvVOhMIaSnrooo+/lP5I no5Oz33RsB1yTZc6CnyjRcu7poQ6zTgV3vw4koTLUtt/hmaEnR6dMh/v3LPKMWbc RF9SnpQigc+sigvGLKkEXMuqcqcG69bFQtVAiHmY8eudj4BgUPfUVbzpSqGzAUjQ crBL1UlyCFZ0Sw+hhR9hg2tLotqB9wfgDhCUmanLfEs5iJEiAb9wco5wKuvaFzJn jXy5wY9YSR1Rnz7c9nH4mBqJ78K6vhBtfRUnpq0GzZwtgEAxT+05JUlWC3DxQtsZ Gkst1Y7pMce/fwoTI+kq0ee93GcaF2bepglWOGD7E81nEQNfmhQszc5Mm6A9VnM6 SMBxxQsCUjwCf46QGp0AlyyjBILN+Kan75kqRU7mWmjBuM7WFTaq1FMoNBw5Xo1h h+OrIqrApj5p+TuRlFtcL5SS6/V+M7gVoyxHE5YVwrJoyicPan5UBV1ta5bohMj3 T1B6hrwRsvhlL/UlKz6ZBZ8IoXJ1HR8LH32mMJzs4dzqKpvN0rynfr2+3oYkwytK YxwK25L4AvP+ntCcPxbe9y6Jp6DxM3ExIjJjYOGniMXTxnO6lzC5vau6UKzlPEZn srbgz+YQleNJlf9Rudfr =lLtD -----END PGP SIGNATURE-----
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