Your message dated Sun, 17 Jan 2016 19:49:31 +0000 with message-id <[email protected]> and subject line Bug#805818: fixed in ocamlgsl 1.19.1-1 has caused the Debian Bug report #805818, regarding ocamlgsl: Fails to build with GSL 2 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 805818: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=805818 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: ocamlgsl Version: 0.6.0-7 Severity: important Tags: upstream Dear Maintainer, Your package fails to build with GSL 2: mlgsl_fit.c: In function 'ml_gsl_multifit_linear_svd': mlgsl_fit.c:154:35: warning: passing argument 2 of 'gsl_multifit_linear_svd' from incompatible pointer type [-Wincompatible-pointer-types] gsl_multifit_linear_svd(&m_x, &v_y, ^ In file included from mlgsl_fit.c:6:0: /usr/include/gsl/gsl_multifit.h:74:1: note: expected 'gsl_multifit_linear_workspace * {aka struct <anonymous> *}' but argument is of type 'gsl_vector * {aka struct <anonymous> *}' gsl_multifit_linear_svd (const gsl_matrix * X, ^ mlgsl_fit.c:154:5: error: too many arguments to function 'gsl_multifit_linear_svd' gsl_multifit_linear_svd(&m_x, &v_y, ^ In file included from mlgsl_fit.c:6:0: /usr/include/gsl/gsl_multifit.h:74:1: note: declared here gsl_multifit_linear_svd (const gsl_matrix * X, ^ This needs to be fixed for the ongoing gsl transition (#804246). The full build log is attached, as is a patch to update the build dependencies for GSL 2 (changing libgsl0-dev to libgsl-dev). Kind Regards, BasI: using cowbuilder as pbuilder dpkg-checkbuilddeps: Unmet build dependencies: libgsl-dev W: Unmet build-dependency in source dpkg-buildpackage: source package ocamlgsl dpkg-buildpackage: source version 0.6.0-7.1 dpkg-buildpackage: source distribution UNRELEASED dpkg-buildpackage: source changed by Bas Couwenberg <[email protected]> dpkg-source --before-build ocamlgsl-0.6.0 dpkg-checkbuilddeps: Unmet build dependencies: libgsl-dev dpkg-buildpackage: warning: build dependencies/conflicts unsatisfied; aborting dpkg-buildpackage: warning: (Use -d flag to override.) dpkg-buildpackage: warning: this is currently a non-fatal warning with -S, but will probably become fatal in the future fakeroot debian/rules clean /usr/share/cdbs/1/rules/dpatch.mk:33: CDBS WARNING: dpatch.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead test -x debian/rules rm -f debian/stamp-makefile-build debian/stamp-makefile-install /usr/bin/make -C . CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall" CXXFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall" CPPFLAGS="-D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro" -k clean make[1]: Entering directory '/home/bas/tmp/debian/ocamlgsl-0.6.0' make[1]: gsl-config: Command not found make[1]: gsl-config: Command not found make[1]: gsl-config: Command not found make[1]: gsl-config: Command not found rm -f *.cm* *.o *.o *.so *.a core* ocamlgsl gsl_const.ml gsl_const.mli gsl_sf.ml gsl_sf.mli gsl_cdf.ml gsl_cdf.mli mlgsl_cdf.c do_cdf do_sf make[1]: Leaving directory '/home/bas/tmp/debian/ocamlgsl-0.6.0' rm -f debian/*.doc-base.apiref* dh_ocamlclean dh_clean /usr/bin/make -f debian/rules reverse-config make[1]: Entering directory '/home/bas/tmp/debian/ocamlgsl-0.6.0' /usr/share/cdbs/1/rules/dpatch.mk:33: CDBS WARNING: dpatch.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead make[1]: Nothing to be done for 'reverse-config'. make[1]: Leaving directory '/home/bas/tmp/debian/ocamlgsl-0.6.0' dpatch deapply-all match_gcc_4_2 not applied to ./ . 02_correct_examples not applied to ./ . make_bytecode not applied to ./ . rm -rf debian/patched rm -f debian/stamp-patched mv .depend.save .depend mv: cannot stat '.depend.save': No such file or directory debian/rules:46: recipe for target 'clean' failed make: [clean] Error 1 (ignored) dpkg-source -b ocamlgsl-0.6.0 dpkg-source: warning: no source format specified in debian/source/format, see dpkg-source(1) dpkg-source: info: using source format `1.0' dpkg-source: info: building ocamlgsl using existing ocamlgsl_0.6.0.orig.tar.gz dpkg-source: info: building ocamlgsl in ocamlgsl_0.6.0-7.1.diff.gz dpkg-source: warning: executable mode 0755 of 'debian/patches/02_correct_examples.dpatch' will not be represented in diff dpkg-source: warning: executable mode 0755 of 'debian/patches/make_bytecode.dpatch' will not be represented in diff dpkg-source: warning: executable mode 0755 of 'debian/patches/match_gcc_4_2.dpatch' will not be represented in diff dpkg-source: info: building ocamlgsl in ocamlgsl_0.6.0-7.1.dsc dpkg-genchanges -S >../ocamlgsl_0.6.0-7.1_source.changes dpkg-genchanges: not including original source code in upload dpkg-source --after-build ocamlgsl-0.6.0 dpkg-buildpackage: source-only, diff-only upload (original source NOT included) -> Copying COW directory forking: rm -rf /var/cache/pbuilder/build//cow.4475 forking: cp -al /var/cache/pbuilder/base-sid+rebuild.cow /var/cache/pbuilder/build//cow.4475 I: removed stale ilistfile /var/cache/pbuilder/build//cow.4475/.ilist forking: chroot /var/cache/pbuilder/build//cow.4475 cowdancer-ilistcreate /.ilist find . -xdev -path ./home -prune -o \( \( -type l -o -type f \) -a -links +1 -print0 \) | xargs -0 stat --format '%d %i ' -> Invoking pbuilder forking: pbuilder build --debbuildopts --debbuildopts --buildplace /var/cache/pbuilder/build//cow.4475 --buildresult /var/cache/pbuilder/result/ --debbuildopts --no-targz --internal-chrootexec chroot /var/cache/pbuilder/build//cow.4475 cow-shell /home/bas/tmp/debian/ocamlgsl_0.6.0-7.1.dsc I: Running in no-targz mode I: using fakeroot in build. I: pbuilder: network access will be disabled during build I: Current time: Sun Nov 22 20:14:57 CET 2015 I: pbuilder-time-stamp: 1448219697 I: copying local configuration I: mounting /proc filesystem I: mounting /run/shm filesystem I: mounting /dev/pts filesystem I: policy-rc.d already exists I: Obtaining the cached apt archive contents I: Installing the build-deps W: no hooks of type D found -- ignoring -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team <[email protected]> Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cdbs (>= 0.4.23-1.1), debhelper (>= 5), dpatch, ocaml-nox (>= 3.10.0-9), ocaml-findlib (>= 1.1.2pl1-4), libgsl-dev, chrpath, gawk, camlp4 (>= 3.10.0), dh-ocaml (>= 0.9.1) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 12439 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cdbs (>= 0.4.23-1.1); however: Package cdbs is not installed. pbuilder-satisfydepends-dummy depends on debhelper (>= 5); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on dpatch; however: Package dpatch is not installed. pbuilder-satisfydepends-dummy depends on ocaml-nox (>= 3.10.0-9); however: Package ocaml-nox is not installed. pbuilder-satisfydepends-dummy depends on ocaml-findlib (>= 1.1.2pl1-4); however: Package ocaml-findlib is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on gawk; however: Package gawk is not installed. pbuilder-satisfydepends-dummy depends on camlp4 (>= 3.10.0); however: Package camlp4 is not in Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: bsdmainutils{a} camlp4{a} cdbs{a} chrpath{a} debhelper{a} dh-ocaml{a} dh-strip-nondeterminism{a} dpatch{a} file{a} gawk{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libcamlp4-ocaml-dev{a} libcroco3{a} libffi6{a} libfile-stripnondeterminism-perl{a} libfindlib-ocaml{a} libglib2.0-0{a} libgsl-dev{a} libgsl2{a} libicu55{a} libmagic1{a} libncurses5-dev{a} libpipeline1{a} libsigsegv2{a} libtinfo-dev{a} libunistring0{a} libxml2{a} man-db{a} ocaml-base-nox{a} ocaml-compiler-libs{a} ocaml-findlib{a} ocaml-interp{a} ocaml-nox{a} po-debconf{a} The following packages are RECOMMENDED but will NOT be installed: autotools-dev curl fakeroot ledit libfindlib-ocaml-dev libglib2.0-data libmail-sendmail-perl lynx-cur patchutils rlfe rlwrap shared-mime-info wget xdg-user-dirs xml-core 0 packages upgraded, 38 newly installed, 0 to remove and 0 not upgraded. Need to get 33.1 MB/53.0 MB of archives. After unpacking 292 MB will be used. Writing extended state information... Get: 1 http://ftp.nl.debian.org/debian/ sid/main ocaml-base-nox amd64 4.02.3-5 [538 kB] Get: 2 http://ftp.nl.debian.org/debian/ sid/main ocaml-compiler-libs amd64 4.02.3-5 [9626 kB] Get: 3 http://ftp.nl.debian.org/debian/ sid/main ocaml-interp amd64 4.02.3-5 [360 kB] Get: 4 http://ftp.nl.debian.org/debian/ sid/main ocaml-nox amd64 4.02.3-5 [5993 kB] Get: 5 http://ftp.nl.debian.org/debian/ sid/main libcamlp4-ocaml-dev amd64 4.02.1+3-2 [12.5 MB] Get: 6 http://ftp.nl.debian.org/debian/ sid/main camlp4 amd64 4.02.1+3-2 [3454 kB] Get: 7 http://ftp.nl.debian.org/debian/ sid/main dpatch all 2.0.37 [89.4 kB] Get: 8 http://ftp.nl.debian.org/debian/ sid/main libfindlib-ocaml amd64 1.5.5-2 [142 kB] Get: 9 http://ftp.nl.debian.org/debian/ sid/main ocaml-findlib amd64 1.5.5-2 [267 kB] Get: 10 http://ftp.nl.debian.org/debian/ sid/main dh-ocaml all 1.0.10 [83.7 kB] Fetched 33.1 MB in 18s (1751 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package groff-base. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12439 files and directories currently installed.) Preparing to unpack .../groff-base_1.22.3-4_amd64.deb ... Unpacking groff-base (1.22.3-4) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../bsdmainutils_9.0.6_amd64.deb ... Unpacking bsdmainutils (9.0.6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../libpipeline1_1.4.1-1_amd64.deb ... 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Selecting previously unselected package dpatch. Preparing to unpack .../archives/dpatch_2.0.37_all.deb ... Unpacking dpatch (2.0.37) ... Selecting previously unselected package libfindlib-ocaml. Preparing to unpack .../libfindlib-ocaml_1.5.5-2_amd64.deb ... Unpacking libfindlib-ocaml (1.5.5-2) ... Selecting previously unselected package libgsl2:amd64. Preparing to unpack .../libgsl2_2.1+dfsg-1_amd64.deb ... Unpacking libgsl2:amd64 (2.1+dfsg-1) ... Selecting previously unselected package libgsl-dev. Preparing to unpack .../libgsl-dev_2.1+dfsg-1_amd64.deb ... Unpacking libgsl-dev (2.1+dfsg-1) ... Selecting previously unselected package ocaml-findlib. Preparing to unpack .../ocaml-findlib_1.5.5-2_amd64.deb ... Unpacking ocaml-findlib (1.5.5-2) ... Selecting previously unselected package dh-ocaml. Preparing to unpack .../dh-ocaml_1.0.10_all.deb ... Unpacking dh-ocaml (1.0.10) ... Processing triggers for libc-bin (2.19-22) ... Setting up groff-base (1.22.3-4) ... Setting up bsdmainutils (9.0.6) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libpipeline1:amd64 (1.4.1-1) ... Setting up man-db (2.7.5-1) ... Building database of manual pages ... Setting up gawk (1:4.1.1+dfsg-1) ... Setting up libffi6:amd64 (3.2.1-3) ... Setting up libunistring0:amd64 (0.9.3-5.2+b1) ... Setting up libmagic1:amd64 (1:5.25-2) ... Setting up file (1:5.25-2) ... Setting up gettext-base (0.19.6-1) ... Setting up libicu55:amd64 (55.1-6) ... Setting up libxml2:amd64 (2.9.2+zdfsg1-4) ... Setting up ocaml-base-nox (4.02.3-5) ... Setting up libtinfo-dev:amd64 (6.0+20151024-2) ... Setting up libncurses5-dev:amd64 (6.0+20151024-2) ... Setting up cdbs (0.4.130) ... Setting up chrpath (0.16-1) ... Setting up libglib2.0-0:amd64 (2.46.2-1) ... No schema files found: doing nothing. Setting up libcroco3:amd64 (0.6.9-1) ... Setting up gettext (0.19.6-1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up po-debconf (1.0.18) ... Setting up libarchive-zip-perl (1.53-1) ... Setting up libfile-stripnondeterminism-perl (0.014-1) ... Setting up dpatch (2.0.37) ... Setting up libfindlib-ocaml (1.5.5-2) ... Setting up libgsl2:amd64 (2.1+dfsg-1) ... Setting up libgsl-dev (2.1+dfsg-1) ... Setting up ocaml-findlib (1.5.5-2) ... Setting up dh-ocaml (1.0.10) ... Setting up ocaml-compiler-libs (4.02.3-5) ... Setting up ocaml-interp (4.02.3-5) ... Setting up debhelper (9.20151117) ... Setting up ocaml-nox (4.02.3-5) ... Setting up libcamlp4-ocaml-dev (4.02.1+3-2) ... Setting up camlp4 (4.02.1+3-2) ... Setting up dh-strip-nondeterminism (0.014-1) ... Processing triggers for libc-bin (2.19-22) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: libfakeroot The following NEW packages will be installed: fakeroot libfakeroot debconf: delaying package configuration, since apt-utils is not installed 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/129 kB of archives. After this operation, 434 kB of additional disk space will be used. Selecting previously unselected package libfakeroot:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 16036 files and directories currently installed.) Preparing to unpack .../libfakeroot_1.20.2-1_amd64.deb ... Unpacking libfakeroot:amd64 (1.20.2-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../fakeroot_1.20.2-1_amd64.deb ... Unpacking fakeroot (1.20.2-1) ... Processing triggers for man-db (2.7.5-1) ... Setting up libfakeroot:amd64 (1.20.2-1) ... Setting up fakeroot (1.20.2-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode I: Copying back the cached apt archive contents I: new cache content ocaml-compiler-libs_4.02.3-5_amd64.deb added I: new cache content libcamlp4-ocaml-dev_4.02.1+3-2_amd64.deb added I: new cache content ocaml-findlib_1.5.5-2_amd64.deb added I: new cache content camlp4_4.02.1+3-2_amd64.deb added I: new cache content dpatch_2.0.37_all.deb added I: new cache content libfindlib-ocaml_1.5.5-2_amd64.deb added I: new cache content dh-ocaml_1.0.10_all.deb added I: new cache content ocaml-base-nox_4.02.3-5_amd64.deb added I: new cache content ocaml-interp_4.02.3-5_amd64.deb added I: new cache content ocaml-nox_4.02.3-5_amd64.deb added I: Copying source file I: copying [/home/bas/tmp/debian/ocamlgsl_0.6.0-7.1.dsc] I: copying [/home/bas/tmp/debian/ocamlgsl_0.6.0.orig.tar.gz] I: copying [/home/bas/tmp/debian/ocamlgsl_0.6.0-7.1.diff.gz] I: Extracting source dpkg-source: warning: extracting unsigned source package (ocamlgsl_0.6.0-7.1.dsc) dpkg-source: info: extracting ocamlgsl in ocamlgsl-0.6.0 dpkg-source: info: unpacking ocamlgsl_0.6.0.orig.tar.gz dpkg-source: info: applying ocamlgsl_0.6.0-7.1.diff.gz I: Building the package W: no hooks of type A found -- ignoring I: Running cd tmp/buildd/*/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin" dpkg-buildpackage -us -uc -rfakeroot dpkg-buildpackage: source package ocamlgsl dpkg-buildpackage: source version 0.6.0-7.1 dpkg-buildpackage: source distribution UNRELEASED dpkg-buildpackage: source changed by Bas Couwenberg <[email protected]> dpkg-source --before-build ocamlgsl-0.6.0 dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean /usr/share/cdbs/1/rules/dpatch.mk:33: CDBS WARNING: dpatch.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead test -x debian/rules rm -f debian/stamp-makefile-build debian/stamp-makefile-install /usr/bin/make -C . CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall" CXXFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall" CPPFLAGS="-D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro" -k clean make[1]: Entering directory '/tmp/buildd/ocamlgsl-0.6.0' rm -f *.cm* *.o *.o *.so *.a core* ocamlgsl gsl_const.ml gsl_const.mli gsl_sf.ml gsl_sf.mli gsl_cdf.ml gsl_cdf.mli mlgsl_cdf.c do_cdf do_sf make[1]: Leaving directory '/tmp/buildd/ocamlgsl-0.6.0' rm -f debian/*.doc-base.apiref* dh_ocamlclean dh_clean /usr/bin/make -f debian/rules reverse-config make[1]: Entering directory '/tmp/buildd/ocamlgsl-0.6.0' /usr/share/cdbs/1/rules/dpatch.mk:33: CDBS WARNING: dpatch.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead make[1]: Nothing to be done for 'reverse-config'. make[1]: Leaving directory '/tmp/buildd/ocamlgsl-0.6.0' dpatch deapply-all match_gcc_4_2 not applied to ./ . 02_correct_examples not applied to ./ . make_bytecode not applied to ./ . rm -rf debian/patched rm -f debian/stamp-patched mv .depend.save .depend mv: cannot stat '.depend.save': No such file or directory debian/rules:46: recipe for target 'clean' failed make: [clean] Error 1 (ignored) dpkg-source -b ocamlgsl-0.6.0 dpkg-source: warning: no source format specified in debian/source/format, see dpkg-source(1) dpkg-source: info: using source format '1.0' dpkg-source: info: building ocamlgsl using existing ocamlgsl_0.6.0.orig.tar.gz dpkg-source: info: building ocamlgsl in ocamlgsl_0.6.0-7.1.diff.gz dpkg-source: warning: executable mode 0755 of 'debian/patches/02_correct_examples.dpatch' will not be represented in diff dpkg-source: warning: executable mode 0755 of 'debian/patches/make_bytecode.dpatch' will not be represented in diff dpkg-source: warning: executable mode 0755 of 'debian/patches/match_gcc_4_2.dpatch' will not be represented in diff dpkg-source: info: building ocamlgsl in ocamlgsl_0.6.0-7.1.dsc debian/rules build /usr/share/cdbs/1/rules/dpatch.mk:33: CDBS WARNING: dpatch.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead test -x debian/rules mkdir -p "." dh_ocamlinit cp .depend .depend.save /usr/bin/make -f debian/rules reverse-config make[1]: Entering directory '/tmp/buildd/ocamlgsl-0.6.0' /usr/share/cdbs/1/rules/dpatch.mk:33: CDBS WARNING: dpatch.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead make[1]: Nothing to be done for 'reverse-config'. make[1]: Leaving directory '/tmp/buildd/ocamlgsl-0.6.0' dpatch apply-all applying patch make_bytecode to ./ ... ok. applying patch 02_correct_examples to ./ ... ok. applying patch match_gcc_4_2 to ./ ... ok. /usr/bin/make -f debian/rules update-config make[1]: Entering directory '/tmp/buildd/ocamlgsl-0.6.0' /usr/share/cdbs/1/rules/dpatch.mk:33: CDBS WARNING: dpatch.mk is deprecated since 0.4.85 - please use source format 3.0 (quilt) instead make[1]: Nothing to be done for 'update-config'. make[1]: Leaving directory '/tmp/buildd/ocamlgsl-0.6.0' touch debian/stamp-patched /usr/bin/make -C . CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall" CXXFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall" CPPFLAGS="-D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro" all-opt make[1]: Entering directory '/tmp/buildd/ocamlgsl-0.6.0' ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_error.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_ieee.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_math.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_complex.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_vector_float.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_vector_double.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_matrix_float.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_matrix_double.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_matrix_complex.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_matrix_complex_float.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_blas.c In file included from mlgsl_blas.c:11:0: mlgsl_blas.h: In function 'CBLAS_ORDER_val': mlgsl_blas.h:5:29: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_ORDER_t CBLAS_ORDER_val(v) ^ mlgsl_blas.h: In function 'CBLAS_TRANS_val': mlgsl_blas.h:11:33: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_TRANSPOSE_t CBLAS_TRANS_val(v) ^ mlgsl_blas.h: In function 'CBLAS_UPLO_val': mlgsl_blas.h:17:28: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_UPLO_t CBLAS_UPLO_val(v) ^ mlgsl_blas.h: In function 'CBLAS_DIAG_val': mlgsl_blas.h:23:28: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_DIAG_t CBLAS_DIAG_val(v) ^ mlgsl_blas.h: In function 'CBLAS_SIDE_val': mlgsl_blas.h:29:28: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_SIDE_t CBLAS_SIDE_val(v) ^ ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_blas_float.c In file included from mlgsl_blas_float.c:11:0: mlgsl_blas.h: In function 'CBLAS_ORDER_val': mlgsl_blas.h:5:29: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_ORDER_t CBLAS_ORDER_val(v) ^ mlgsl_blas.h: In function 'CBLAS_TRANS_val': mlgsl_blas.h:11:33: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_TRANSPOSE_t CBLAS_TRANS_val(v) ^ mlgsl_blas.h: In function 'CBLAS_UPLO_val': mlgsl_blas.h:17:28: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_UPLO_t CBLAS_UPLO_val(v) ^ mlgsl_blas.h: In function 'CBLAS_DIAG_val': mlgsl_blas.h:23:28: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_DIAG_t CBLAS_DIAG_val(v) ^ mlgsl_blas.h: In function 'CBLAS_SIDE_val': mlgsl_blas.h:29:28: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_SIDE_t CBLAS_SIDE_val(v) ^ ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_blas_complex.c In file included from mlgsl_blas_complex.c:11:0: mlgsl_blas.h: In function 'CBLAS_ORDER_val': mlgsl_blas.h:5:29: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_ORDER_t CBLAS_ORDER_val(v) ^ mlgsl_blas.h: In function 'CBLAS_TRANS_val': mlgsl_blas.h:11:33: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_TRANSPOSE_t CBLAS_TRANS_val(v) ^ mlgsl_blas.h: In function 'CBLAS_UPLO_val': mlgsl_blas.h:17:28: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_UPLO_t CBLAS_UPLO_val(v) ^ mlgsl_blas.h: In function 'CBLAS_DIAG_val': mlgsl_blas.h:23:28: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_DIAG_t CBLAS_DIAG_val(v) ^ mlgsl_blas.h: In function 'CBLAS_SIDE_val': mlgsl_blas.h:29:28: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_SIDE_t CBLAS_SIDE_val(v) ^ ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_blas_complex_float.c In file included from mlgsl_blas_complex_float.c:13:0: mlgsl_blas.h: In function 'CBLAS_ORDER_val': mlgsl_blas.h:5:29: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_ORDER_t CBLAS_ORDER_val(v) ^ mlgsl_blas.h: In function 'CBLAS_TRANS_val': mlgsl_blas.h:11:33: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_TRANSPOSE_t CBLAS_TRANS_val(v) ^ mlgsl_blas.h: In function 'CBLAS_UPLO_val': mlgsl_blas.h:17:28: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_UPLO_t CBLAS_UPLO_val(v) ^ mlgsl_blas.h: In function 'CBLAS_DIAG_val': mlgsl_blas.h:23:28: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_DIAG_t CBLAS_DIAG_val(v) ^ mlgsl_blas.h: In function 'CBLAS_SIDE_val': mlgsl_blas.h:29:28: warning: type of 'v' defaults to 'int' [-Wimplicit-int] static inline CBLAS_SIDE_t CBLAS_SIDE_val(v) ^ ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_fun.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_permut.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_sort.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_linalg.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_linalg_complex.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_eigen.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_poly.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_interp.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_rng.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_qrng.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_randist.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_integration.c ocamlc -ccopt '-D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall ' -c mlgsl_fit.c mlgsl_fit.c: In function 'ml_gsl_multifit_linear_svd': mlgsl_fit.c:154:35: warning: passing argument 2 of 'gsl_multifit_linear_svd' from incompatible pointer type [-Wincompatible-pointer-types] gsl_multifit_linear_svd(&m_x, &v_y, ^ In file included from mlgsl_fit.c:6:0: /usr/include/gsl/gsl_multifit.h:74:1: note: expected 'gsl_multifit_linear_workspace * {aka struct <anonymous> *}' but argument is of type 'gsl_vector * {aka struct <anonymous> *}' gsl_multifit_linear_svd (const gsl_matrix * X, ^ mlgsl_fit.c:154:5: error: too many arguments to function 'gsl_multifit_linear_svd' gsl_multifit_linear_svd(&m_x, &v_y, ^ In file included from mlgsl_fit.c:6:0: /usr/include/gsl/gsl_multifit.h:74:1: note: declared here gsl_multifit_linear_svd (const gsl_matrix * X, ^ Makefile:240: recipe for target 'mlgsl_fit.o' failed make[1]: *** [mlgsl_fit.o] Error 2 make[1]: Leaving directory '/tmp/buildd/ocamlgsl-0.6.0' /usr/share/cdbs/1/class/makefile.mk:47: recipe for target 'debian/stamp-makefile-build' failed make: *** [debian/stamp-makefile-build] Error 2 dpkg-buildpackage: error: debian/rules build gave error exit status 2 E: Failed autobuilding of package W: no hooks of type C found -- ignoring I: unmounting dev/pts filesystem I: unmounting run/shm filesystem I: unmounting proc filesystem -> Cleaning COW directory forking: rm -rf /var/cache/pbuilder/build//cow.4475diff -u ocamlgsl-0.6.0/debian/control ocamlgsl-0.6.0/debian/control --- ocamlgsl-0.6.0/debian/control +++ ocamlgsl-0.6.0/debian/control @@ -8,7 +8,7 @@ dpatch, ocaml-nox (>= 3.10.0-9), ocaml-findlib (>= 1.1.2pl1-4), - libgsl0-dev, + libgsl-dev, chrpath, gawk, camlp4 (>= 3.10.0), @@ -20,7 +20,7 @@ Package: libocamlgsl-ocaml-dev Architecture: any -Depends: ${shlibs:Depends}, ${ocaml:Depends}, libocamlgsl-ocaml (= ${binary:Version}), libgsl0-dev, ${misc:Depends} +Depends: ${shlibs:Depends}, ${ocaml:Depends}, libocamlgsl-ocaml (= ${binary:Version}), libgsl-dev, ${misc:Depends} Provides: ${ocaml:Provides} Description: GNU scientific library for OCaml This is an interface to GSL (GNU scientific library), for the diff -u ocamlgsl-0.6.0/debian/changelog ocamlgsl-0.6.0/debian/changelog --- ocamlgsl-0.6.0/debian/changelog +++ ocamlgsl-0.6.0/debian/changelog @@ -1,3 +1,10 @@ +ocamlgsl (0.6.0-7.1) UNRELEASED; urgency=medium + + * Non-maintainer upload. + * Update build dependencies for GSL 2, change libgsl0-dev to libgsl-dev. + + -- Bas Couwenberg <[email protected]> Sun, 22 Nov 2015 20:14:34 +0100 + ocamlgsl (0.6.0-7) unstable; urgency=low * Install libmlgsl.a on non-native architectures (Closes: #567060)
--- End Message ---
--- Begin Message ---Source: ocamlgsl Source-Version: 1.19.1-1 We believe that the bug you reported is fixed in the latest version of ocamlgsl, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Mehdi Dogguy <[email protected]> (supplier of updated ocamlgsl package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Sun, 17 Jan 2016 20:34:21 +0100 Source: ocamlgsl Binary: libocamlgsl-ocaml-dev libocamlgsl-ocaml Architecture: source amd64 Version: 1.19.1-1 Distribution: unstable Urgency: low Maintainer: Debian OCaml Maintainers <[email protected]> Changed-By: Mehdi Dogguy <[email protected]> Description: libocamlgsl-ocaml - GNU scientific library for OCaml libocamlgsl-ocaml-dev - GNU scientific library for OCaml Closes: 805818 Changes: ocamlgsl (1.19.1-1) unstable; urgency=low . * Team upload. . [ Sylvain Le Gall ] * Remove Sylvain Le Gall from uploaders . [ Bas Couwenberg ] * Update build dependencies for GSL 2, change libgsl0-dev to libgsl-dev (Closes: #805818). . [ Mehdi Dogguy ] * Import new upstream release, which fixes FTBFS issues and GSL 2 compatibility issues. * Remove local patches, not needed anymore * Upstream repository has moved to github.com/mmottl/gsl-ocaml * Update packaging to cope with upstream's build system * Convert source package to 3.0 (quilt) * Convert packaging from cdbs to dh-7 style * Update debian/copyright file. Checksums-Sha1: 77d781f0f24c9dca52a766d4bc41b5392126a5c2 2094 ocamlgsl_1.19.1-1.dsc 6087f374780baf45035f6c2e29dca120a719931c 167549 ocamlgsl_1.19.1.orig.tar.gz 561265e7a67577645bcf6c5e68321fead9885274 4528 ocamlgsl_1.19.1-1.debian.tar.xz b02cf2f5c9364138fef34b1bb9a618c844b8f8fd 611560 libocamlgsl-ocaml-dbgsym_1.19.1-1_amd64.deb 9939e1d2650f2daca1f5fb316b740efcdb606f9f 1076648 libocamlgsl-ocaml-dev_1.19.1-1_amd64.deb 35362861220c58fd994b9d65a4529d69a7455622 327124 libocamlgsl-ocaml_1.19.1-1_amd64.deb Checksums-Sha256: 4b63d8d2c85d38456c9d60c8f0d4492547ffffbc0f11ff75937bb3e2e1414540 2094 ocamlgsl_1.19.1-1.dsc 05891594ed3b4ea0c2f201531aeafce1280b937a18ba76d818760252c2b34b66 167549 ocamlgsl_1.19.1.orig.tar.gz 084ffdcfdd41685d91fe9cee91c5ee49ab39b22569a74ff2119d1ee2bdbf2295 4528 ocamlgsl_1.19.1-1.debian.tar.xz f24b45ad5d605e93cc7ce8b75813f3b886f3f24af182d055a2e4162e791cb7e4 611560 libocamlgsl-ocaml-dbgsym_1.19.1-1_amd64.deb d40b4faebb02fe063d2351ca50ef62446f11ff93309227bf7eadba2737dd0bbd 1076648 libocamlgsl-ocaml-dev_1.19.1-1_amd64.deb befa3d530a118d5304f746eec82b8766d4130e1b9aa63cbfb299297726a78fd4 327124 libocamlgsl-ocaml_1.19.1-1_amd64.deb Files: 82c7bc00a4d3ec784c09dc9cb68acb5d 2094 ocaml optional ocamlgsl_1.19.1-1.dsc b59a432ac89b49fbd0085d4e17315c50 167549 ocaml optional ocamlgsl_1.19.1.orig.tar.gz cdf30733a54fc3bba7f68667c221032b 4528 ocaml optional ocamlgsl_1.19.1-1.debian.tar.xz ad9e6fe457f24fd61d083804a99d91ed 611560 debug extra libocamlgsl-ocaml-dbgsym_1.19.1-1_amd64.deb 3b047210bb7e52de0aeadf85196a391a 1076648 ocaml optional libocamlgsl-ocaml-dev_1.19.1-1_amd64.deb e3d547689287fa72adc1ad507d08b684 327124 ocaml optional libocamlgsl-ocaml_1.19.1-1_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJWm+4SAAoJEDO+GgqMLtj/vKYP/jJa4wOzZK7b1PAiMCP0xebC uwaFQN45rcX7y8VSZPWxePUtpHDMd5TDU3j58t0rVnnZFrroGc2f3NaOueoMeVwH 1na+ILutMHVLNVtgo2uLkuaGfzolgmXnOMt48qxbE+sti/lyEp6RteJtSJmUSpdl eBDwHpHTaHnIaCb4aFNAP7E+T/NulG4wXbPvx9FoEdNcgJpiPpY6D3Fb9uXxcFMV DtduY+AI+0xxwq4TmcAq6qdPqibhxQsafFPLczE3MC1LT8VxrUBo9Qrz9/1vcSTn AzPOP3oQ9ezoJT/qHrrEU9jYwbniVLmAoj6CsdoV4lcCRJmm+Tj2GTJxqaHCQNJu 1CePuqJpExDkQJvxEeJPylhNocFV9rzGknJrxfUpgoRTONlHAasdxJuUVXjLUecM SAfnXuIBBZZETxGfkcMCN7zdzwEfWvndP20tvcaDdjHGZqwxCxa2qbokAdTOGY94 RqI/2rCa4cCOCTR0kTBu5zZ9DXuV8dFGjlipFJ3p7xOtxCmYb2jjUFtwNH1QQaBb LUEURiFvbxBP2b6HWxCKWmBrSztOlARgydCIi8q0sry0X4QSnEQ4lRAzdvoTv2Vq tqe1KC6EGuQTTal/ArDIeTLPn6YYNLI5OkmDJC90sfIqfuIjzDlqJ9Yu1K3iOEHm 0WLGFcnY4l2MtuSFmX4R =/xF0 -----END PGP SIGNATURE-----
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